Gene_Locus Report

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Gene_locus Report for: yerpe-YPO0667

Yersinia pestis, Yersinia pseudotuberculosis hypothetical protein ypo0667

Comment
Other strains: Yersinia pestis (biovars; Orientalis (IP275; PEXU2; India 195; F1991016; MG05-1020), Mediaevalis (K1973002; Harbin 35), Antiqua (UG05-0454; E1979001; Nepal516; Angola; Antiqua; B42003004); CA88-4125; Z176003; D182038; KIM D27; Pestoides A; D106004; Pestoides F), Yersinia pseudotuberculosis (serotype O:3 YPIII; serotype O:1b IP 31758; serotype IB PB1/+)


Relationship
Family|abh_upf00227
Block| X
Position in NCBI Life Tree|Yersinia pestis
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Gammaproteobacteria: N E > Enterobacterales: N E > Yersiniaceae: N E > Yersinia: N E > Yersinia pseudotuberculosis complex: N E > Yersinia pestis: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
>3 Genbank links 1 more: BX936398, AJ414144, AE013954
2 UniProt : Q7CGH5, Q665W4
2 UniProt : Q7CGH5, Q665W4
2 Interpro : Q7CGH5, Q665W4
2 Prodom : Q7CGH5, Q665W4
2 Pfam : Q7CGH5, Q665W4
2 PIRSF : Q7CGH5, Q665W4
2 SUPERFAM : Q7CGH5, Q665W4
Sequence
Graphical view for this peptide sequence: yerpe-YPO0667
Colored MSA for abh_upf00227 (raw)
MMSTLLYIHGFNSSPSSAKATAFKEWLQQHYPHIEMLTPQLPPYPAPAAE
MLENIVMDKAGQSIGIVGSSLGGYFATWLSQRFGIPAVVVNPAVRPYELL
SDYLGKNENPYTGQQYVLESRHIYDLKAMQIEKLESPDLLWLLQQTGDEI
LDYRQAVAYYTPCRQTVESGGNHAFIGFDHYFSPIVTFLGLANT
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MMSTLLYIHGFNSSPSSAKATAFKEWLQQHYPHIEMLTPQLPPYPAPAAE
MLENIVMDKAGQSIGIVGSSLGGYFATWLSQRFGIPAVVVNPAVRPYELL
SDYLGKNENPYTGQQYVLESRHIYDLKAMQIEKLESPDLLWLLQQTGDEI
LDYRQAVAYYTPCRQTVESGGNHAFIGFDHYFSPIVTFLGLANT


References
7 more
    Title: Insights into the evolution of Yersinia pestis through whole-genome comparison with Yersinia pseudotuberculosis
    Chain PS, Carniel E, Larimer FW, Lamerdin J, Stoutland PO, Regala WM, Georgescu AM, Vergez LM, Land ML and Garcia E <13 more author(s)>
    Ref: Proc Natl Acad Sci U S A, 101:13826, 2004 : PubMed

            

    Title: Genome sequence of Yersinia pestis KIM
    Deng W, Burland V, Plunkett G, 3rd, Boutin A, Mayhew GF, Liss P, Perna NT, Rose DJ, Mau B and Perry RD <11 more author(s)>
    Ref: Journal of Bacteriology, 184:4601, 2002 : PubMed

            

    Title: Genome sequence of Yersinia pestis, the causative agent of plague.
    Parkhill J, Wren BW, Thomson NR, Titball RW, Holden MTG, Prentice MB, Sebaihia M, James KD, Churcher C and Barrell BG <25 more author(s)>
    Ref: Nature, 413:523, 2001 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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