Gene_Locus Report

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Gene_locus Report for: yerpe-YPO2526

Yersinia pestis, Yersinia pseudotuberculosis, MENH, PEXU2 hypothetical protein ypo2526 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase

Comment
Other strains: Yersinia pestis (strains Z176003; D106004; D182038; KIM D27; A1122) (and bv. Antiqua (strains Nepal516; Angola; UG05-0454; B42003004; E1979001) bv. Medievalis (strains Harbin 35; K1973002) biovar Orientalis strains (IP275; F1991016; MG05-1020)( Pestoides F, Pestoides A)(strain Antiqua CA88-4125)) and Yersinia pseudotuberculosis ( and serotype O:1b (strain IP 31758) serotype IB (strain PB1/+)serotype O:3 (strain YPIII)) biovar Orientalis str. India 195


Relationship
Family|MenH_SHCHC
Block| X
Position in NCBI Life Tree|Yersinia pestis
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Gammaproteobacteria: N E > Enterobacterales: N E > Yersiniaceae: N E > Yersinia: N E > Yersinia pseudotuberculosis complex: N E > Yersinia pestis: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
Sequence
Graphical view for this peptide sequence: yerpe-YPO2526
Colored MSA for MenH_SHCHC (raw)
MTTLACRKLAPHPESPRHQHAGPWLVWLHGLLGSGQDWLPVAQLCGDYPS
LLIDLPGHGQSVSLSADGFADISRQLSQTLQANGIREYWLAGYSLGGRIA
IYHACYGRHHGLQGLLVEGGNLGLENAELRQARLQQDRQWAQRFRQEPLP
QVLDDWYQQAVFADLDPQQREQLVLLRADNHGPAVAEMLEATSLGHQPWL
LPALQRLNVPYTYLCGDRDHKFLQLAQQYRLPLHTLARAGHNAHRANPGA
FAAQVLAFLSQSSCLPPSSLSR
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MTTLACRKLAPHPESPRHQHAGPWLVWLHGLLGSGQDWLPVAQLCGDYPS
LLIDLPGHGQSVSLSADGFADISRQLSQTLQANGIREYWLAGYSLGGRIA
IYHACYGRHHGLQGLLVEGGNLGLENAELRQARLQQDRQWAQRFRQEPLP
QVLDDWYQQAVFADLDPQQREQLVLLRADNHGPAVAEMLEATSLGHQPWL
LPALQRLNVPYTYLCGDRDHKFLQLAQQYRLPLHTLARAGHNAHRANPGA
FAAQVLAFLSQSSCLPPSSLSR


References
7 more
    Title: Insights into the evolution of Yersinia pestis through whole-genome comparison with Yersinia pseudotuberculosis
    Chain PS, Carniel E, Larimer FW, Lamerdin J, Stoutland PO, Regala WM, Georgescu AM, Vergez LM, Land ML and Garcia E <13 more author(s)>
    Ref: Proc Natl Acad Sci U S A, 101:13826, 2004 : PubMed

            

    Title: Genome sequence of Yersinia pestis KIM
    Deng W, Burland V, Plunkett G, 3rd, Boutin A, Mayhew GF, Liss P, Perna NT, Rose DJ, Mau B and Perry RD <11 more author(s)>
    Ref: Journal of Bacteriology, 184:4601, 2002 : PubMed

            

    Title: Genome sequence of Yersinia pestis, the causative agent of plague.
    Parkhill J, Wren BW, Thomson NR, Titball RW, Holden MTG, Prentice MB, Sebaihia M, James KD, Churcher C and Barrell BG <25 more author(s)>
    Ref: Nature, 413:523, 2001 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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