Gene_Locus Report

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Gene_locus Report for: arath-PLA13

Arabidopsis thaliana (Mouse-ear cress), Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress) PLA13 At2g31690 T9H9 DAD1-like lipase 5, DALL5

Relationship
Family|Plant_phospholipase
Block| L
Position in NCBI Life Tree|Arabidopsis thaliana
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Viridiplantae: N E > Streptophyta: N E > Streptophytina: N E > Embryophyta: N E > Tracheophyta: N E > Euphyllophyta: N E > Spermatophyta: N E > Magnoliophyta: N E > Mesangiospermae: N E > eudicotyledons: N E > Gunneridae: N E > Pentapetalae: N E > rosids: N E > malvids: N E > Brassicales: N E > Brassicaceae: N E > Camelineae: N E > Arabidopsis: N E > Arabidopsis thaliana: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acid identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : AC007071
2 UniProt : Q9SIN9, D7LDN5
1 Ncbi-nid : 6598661
1 Ncbi-pid : 4582461
2 UniProt : Q9SIN9, D7LDN5
2 Interpro : Q9SIN9, D7LDN5
2 Pfam : Q9SIN9, D7LDN5
2 PIRSF : Q9SIN9, D7LDN5
2 SUPERFAM : Q9SIN9, D7LDN5
1 Tair database : AT2G31690
Sequence
Graphical view for this peptide sequence: arath-PLA13
Colored MSA for Plant_phospholipase (raw)
MALIQNPNMKHAPFLRNRSPQQTLFIPYTLSLPISYQNPKRLKTANSSSS
SSLLAPVILNSPVASSSPPPIYCAPKFPCSSGAATVPLSRVWREIQGCNN
WKDLIEPLNPLLQQEITRYGNLVSTCYKAFDLDPNSKRYLNCKYGKQTLL
KETEIDQPEDYQVTKYIYATPDININISPIQNEMNRRARWVGYVAASSDD
SVKRLGRRDIVVTFRGTVTNPEWLANFMSSLTPARFHPHNPRLDVKVESG
FLSLYTSDESESKFGLESCRQQLLSEISRLMNKYKGEEMSITLAGHSMGS
SLAQLLAYDIAELGLNRRIGKGDIPVTVFSFAGPRVGNLEFKKRCEELGV
KVLRITNVNDPVTKLPGVLFNENFRVLGGFYELPWSCSCYVHVGVELTLD
FFDVQNISCVHDLQTYIDLLNQRRTNSRSVDSDEDEDSDNVALEFLKTNG
EKMMFLKRQRMMYWSNAVDLLFSFSNHMSYCNIF
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MALIQNPNMKHAPFLRNRSPQQTLFIPYTLSLPISYQNPKRLKTANSSSS
SSLLAPVILNSPVASSSPPPIYCAPKFPCSSGAATVPLSRVWREIQGCNN
WKDLIEPLNPLLQQEITRYGNLVSTCYKAFDLDPNSKRYLNCKYGKQTLL
KETEIDQPEDYQVTKYIYATPDININISPIQNEMNRRARWVGYVAASSDD
SVKRLGRRDIVVTFRGTVTNPEWLANFMSSLTPARFHPHNPRLDVKVESG
FLSLYTSDESESKFGLESCRQQLLSEISRLMNKYKGEEMSITLAGHSMGS
SLAQLLAYDIAELGLNRRIGKGDIPVTVFSFAGPRVGNLEFKKRCEELGV
KVLRITNVNDPVTKLPGVLFNENFRVLGGFYELPWSCSCYVHVGVELTLD
FFDVQNISCVHDLQTYIDLLNQRRTNSRSVDSDEDEDSDNVALEFLKTNG
EKMMFLKRQRMMYWSNAVDLLFSFSNHMSYCNIF


References
5 more
    Title: Wound-induced expression of DEFECTIVE IN ANTHER DEHISCENCE1 and DAD1-like lipase genes is mediated by both CORONATINE INSENSITIVE1-dependent and independent pathways in Arabidopsis thaliana
    Rudus I, Terai H, Shimizu T, Kojima H, Hattori K, Nishimori Y, Tsukagoshi H, Kamiya Y, Seo M and Ishiguro S <2 more author(s)>
    Ref: Plant Cell Rep, 33:849, 2014 : PubMed

            

    Title: Enzymatic characterization of class I DAD1-like acylhydrolase members targeted to chloroplast in Arabidopsis
    Seo YS, Kim EY, Kim JH, Kim WT
    Ref: FEBS Letters, 583:2301, 2009 : PubMed

            

    Title: Cooperation and functional diversification of two closely related galactolipase genes for jasmonate biosynthesis
    Hyun Y, Choi S, Hwang HJ, Yu J, Nam SJ, Ko J, Park JY, Seo YS, Kim EY and Lee I <4 more author(s)>
    Ref: Dev Cell, 14:183, 2008 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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