Gene_Locus Report

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Gene_locus Report for: xanax-XAC0805

Xanthomonas axonopodis, Xanthomonas campestris, Xanthomonas fuscans, Xanthomonas vesicatoria, Xanthomonas gardneri; Xanthomonas perforans, hypothetical protein xac0805

Comment
Other strains: Xanthomonas axonopodis pv. citri (strain 306), Xanthomonas campestris pv. vesicatoria (strain 85-10), Xanthomonas fuscans subsp. aurantifolii (strain ICPB 10535; ICPB 11122), Xanthomonas vesicatoria ATCC 35937, Xanthomonas gardneri ATCC 19865; Xanthomonas perforans 91-118 long N-term extension as in xanax-XAC0805 xanca-XCC0753 xylfa-XF2551 arath-CGEP caucr-CC2671 sheon-SO1310


Relationship
Family|Glutamyl_Peptidase_S9
Block| X
Position in NCBI Life Tree|Xanthomonas axonopodis
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Gammaproteobacteria: N E > Xanthomonadales: N E > Xanthomonadaceae: N E > Xanthomonas: N E > Xanthomonas axonopodis: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acid identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
2 Genbank : AE011711, AM039952
>3 UniProt links 2 more: Q8PP83, Q3BXC5, F0BCH8
>3 UniProt links 2 more: Q8PP83, Q3BXC5, F0BCH8
>3 Interpro links 2 more: Q8PP83, Q3BXC5, F0BCH8
>3 Pfam links 2 more: Q8PP83, Q3BXC5, F0BCH8
>3 PIRSF links 2 more: Q8PP83, Q3BXC5, F0BCH8
>3 SUPERFAM links 2 more: Q8PP83, Q3BXC5, F0BCH8
Sequence
Graphical view for this peptide sequence: xanax-XAC0805
Colored MSA for Glutamyl_Peptidase_S9 (raw)
MRAKRHAQGWRQHTWALAGALALSAPMMAGAASPAVTKVAVVQPGPASGS
GYQLPSKALQAVVDAPRAPLLQLSPRRDLAAMLQLPALPDIAEVAQPELK
LAGLRIHPKTFAASRFSFASKLWLLSVADGSERQIAGLPSPLSLADLSWS
PDQRHLAFRREDAASGANELWLVDVATGQARRLVAGLNTSVNDDLRWLPD
GSGLLLQQQVAGQGAPPTRDATPTGPATQQTSAAAGVRSLPTYQDLLRSE
ADARVFEYYATGQPIIVTVAGQVRPIATPGIYLNLSVSPDGRYILSERSE
RPFSYLVPVDNFARRIEVLDLQGKLVRQIAQLPLVEGLPTGNDAVPTGVR
DIAWRHDAPATLVWAEAQDGGDPARESKVRDAVRMQAAPFNRAPVTLAQL
GSRFEGIQWGRGDLAILSESWWKTRRTKQWRIAPDQPQRAPELLWDRSSQ
DRYKDPGTPATVADGNGRPLLQTSSDGNSLFLFGKGASPEGDRPFVDRFD
LRSKQATRLFHSQAPTYSAPLALLDAQATQLLLSRESPEEPANYVVQPLG
DGAAAARALTHFAHPLPQLRGVQKEQIRYKRADGVELTATLLLPPGYDPK
RDGPRPLLMWAYPGEFKSADTASQVTDSPYRFNAISYWGPQAFLAIGYVV
LNNPSTPIVGEGDAEPNDTYVPQLIADAQAAVDEVVRRGVTDREHIAIGG
HSYGAFMTANLLAHTRLFKAGIARSGAYNRTLTPFGFQAEERNYWQAQSV
YQAMSPFNYADKIKDPLLLIHGQDDNNTGTFPIQSERMFAAIKGLGGTAR
LVLLPNESHAYRARQSIMQMLAESEQWLKTNVGDPAQAEVPSKR
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MRAKRHAQGWRQHTWALAGALALSAPMMAGAASPAVTKVAVVQPGPASGS
GYQLPSKALQAVVDAPRAPLLQLSPRRDLAAMLQLPALPDIAEVAQPELK
LAGLRIHPKTFAASRFSFASKLWLLSVADGSERQIAGLPSPLSLADLSWS
PDQRHLAFRREDAASGANELWLVDVATGQARRLVAGLNTSVNDDLRWLPD
GSGLLLQQQVAGQGAPPTRDATPTGPATQQTSAAAGVRSLPTYQDLLRSE
ADARVFEYYATGQPIIVTVAGQVRPIATPGIYLNLSVSPDGRYILSERSE
RPFSYLVPVDNFARRIEVLDLQGKLVRQIAQLPLVEGLPTGNDAVPTGVR
DIAWRHDAPATLVWAEAQDGGDPARESKVRDAVRMQAAPFNRAPVTLAQL
GSRFEGIQWGRGDLAILSESWWKTRRTKQWRIAPDQPQRAPELLWDRSSQ
DRYKDPGTPATVADGNGRPLLQTSSDGNSLFLFGKGASPEGDRPFVDRFD
LRSKQATRLFHSQAPTYSAPLALLDAQATQLLLSRESPEEPANYVVQPLG
DGAAAARALTHFAHPLPQLRGVQKEQIRYKRADGVELTATLLLPPGYDPK
RDGPRPLLMWAYPGEFKSADTASQVTDSPYRFNAISYWGPQAFLAIGYVV
LNNPSTPIVGEGDAEPNDTYVPQLIADAQAAVDEVVRRGVTDREHIAIGG
HSYGAFMTANLLAHTRLFKAGIARSGAYNRTLTPFGFQAEERNYWQAQSV
YQAMSPFNYADKIKDPLLLIHGQDDNNTGTFPIQSERMFAAIKGLGGTAR
LVLLPNESHAYRARQSIMQMLAESEQWLKTNVGDPAQAEVPSKR


References
1 more
    Title: Comparative genomics reveals diversity among xanthomonads infecting tomato and pepper
    Potnis N, Krasileva K, Chow V, Almeida NF, Patil PB, Ryan RP, Sharlach M, Behlau F, Dow JM and Jones JB <8 more author(s)>
    Ref: BMC Genomics, 12:146, 2011 : PubMed

            

    Title: Insights into genome plasticity and pathogenicity of the plant pathogenic bacterium Xanthomonas campestris pv. vesicatoria revealed by the complete genome sequence
    Thieme F, Koebnik R, Bekel T, Berger C, Boch J, Buttner D, Caldana C, Gaigalat L, Goesmann A and Kaiser O <19 more author(s)>
    Ref: Journal of Bacteriology, 187:7254, 2005 : PubMed

            

    Title: Comparison of the genomes of two Xanthomonas pathogens with differing host specificities
    da Silva ACR, Ferro JA, Reinach FC, Farah CS, Furlan LR, Quaggio RB, Monteiro-Vitorello CB, Van Sluys MA, Almeida Jr NF and Kitajima JP <55 more author(s)>
    Ref: Nature, 417:459, 2002 : PubMed

            


Other Papers


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Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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