Gene_Locus Report

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Gene_locus Report for: xanax-XAC1213

Xanthomonas axonopodis, Xanthomonas campestris, Xanthomonas fuscans, Xanthomonas vesicatori, Xanthomonas perforans, Xanthomonas gardneri, Xanthomonas citri , carboxylesterase

Comment
Other strains: Xanthomonas axonopodis (pv. citri str. 306 XAC1213 pv. punicae str. LMG 859; pv. malvacearum (str. GSPB388; GSPB1386); Xac29-1; pv. glycines str. 8ra.); pv. dieffenbachiae and Xanthomonas campestris (pv. vesicatoria (strain 85-10);pv. viticola; pv. citrumelo F1) Xanthomonas fuscans (subsp. aurantifolii (ICPB 10535; 11122); subsp. fuscans) Xanthomonas vesicatoria ATCC 35937 Xanthomonas perforans 91-118 Xanthomonas gardneri ATCC 19865. Xanthomonas citri pv. mangiferaeindicae LMG 941 This gene has no orthologue in Xanthomonas campestris except in pv. vesicatoria (strain 85-10)and pv. viticola


Relationship
Family|Carb_B_Bacteria
Block| C
Position in NCBI Life Tree|Xanthomonas axonopodis
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Gammaproteobacteria: N E > Xanthomonadales: N E > Xanthomonadaceae: N E > Xanthomonas: N E > Xanthomonas axonopodis: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acid identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
Sequence
Graphical view for this peptide sequence: xanax-XAC1213
Colored MSA for Carb_B_Bacteria (raw)
MRELNSLGAFLVAACLLVGCAPRRPGEVPALVHAPDARAEVVQTTAGPVR
GVASAQGRAFLGVPFAAPPVGELRFRAPQPPAAWTQVRDATQAGPACLPR
YRVGQKHVSEDCLTLNVYAPPGPAPAHPRAVMVWIYGGALELGSNVDYDL
SALAARQDVIVVAPNYRLGVFGFYAHPGLRGEGEGAYALLDQQAALRWVQ
RNIAAFGGDAHNVTVFGESAGAWSICYQLASPGAAGLFQRAILQSGSCLA
SDSSVPQREAESGGVRMAQSLGCAHAPDAAACLRALPADTLADAAPQRRG
LTGSDAWAPMSGGQALPLPPAAAIASGRHVQVPVLMGTNRDEGRLFAQLL
SYIGKLNLRSGYEARVQRMHASPAPVLRQYAAVAAQSRWEAFADIVTDGG
FACPTRRLGRALRTHAPVYAYEFDDPHAPYGLLRLPFSPALGAFHASELV
YLFQRPWVLSGKPQFSPAQQAFANTLQDYWGAFARTGDPNGGGRPPWSLF
DGDTPLTLSPQRIGATPDFVQRHRCAFWDAHADTATTSVQPSSQ
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MRELNSLGAFLVAACLLVGCAPRRPGEVPALVHAPDARAEVVQTTAGPVR
GVASAQGRAFLGVPFAAPPVGELRFRAPQPPAAWTQVRDATQAGPACLPR
YRVGQKHVSEDCLTLNVYAPPGPAPAHPRAVMVWIYGGALELGSNVDYDL
SALAARQDVIVVAPNYRLGVFGFYAHPGLRGEGEGAYALLDQQAALRWVQ
RNIAAFGGDAHNVTVFGESAGAWSICYQLASPGAAGLFQRAILQSGSCLA
SDSSVPQREAESGGVRMAQSLGCAHAPDAAACLRALPADTLADAAPQRRG
LTGSDAWAPMSGGQALPLPPAAAIASGRHVQVPVLMGTNRDEGRLFAQLL
SYIGKLNLRSGYEARVQRMHASPAPVLRQYAAVAAQSRWEAFADIVTDGG
FACPTRRLGRALRTHAPVYAYEFDDPHAPYGLLRLPFSPALGAFHASELV
YLFQRPWVLSGKPQFSPAQQAFANTLQDYWGAFARTGDPNGGGRPPWSLF
DGDTPLTLSPQRIGATPDFVQRHRCAFWDAHADTATTSVQPSSQ


References
5 more
    Title: Novel insights into the genomic basis of citrus canker based on the genome sequences of two strains of Xanthomonas fuscans subsp. aurantifolii
    Moreira LM, Almeida NF, Jr., Potnis N, Digiampietri LA, Adi SS, Bortolossi JC, da Silva AC, da Silva AM, de Moraes FE and Setubal JC <21 more author(s)>
    Ref: BMC Genomics, 11:238, 2010 : PubMed

            

    Title: Insights into genome plasticity and pathogenicity of the plant pathogenic bacterium Xanthomonas campestris pv. vesicatoria revealed by the complete genome sequence
    Thieme F, Koebnik R, Bekel T, Berger C, Boch J, Buttner D, Caldana C, Gaigalat L, Goesmann A and Kaiser O <19 more author(s)>
    Ref: Journal of Bacteriology, 187:7254, 2005 : PubMed

            

    Title: Comparison of the genomes of two Xanthomonas pathogens with differing host specificities
    da Silva ACR, Ferro JA, Reinach FC, Farah CS, Furlan LR, Quaggio RB, Monteiro-Vitorello CB, Van Sluys MA, Almeida Jr NF and Kitajima JP <55 more author(s)>
    Ref: Nature, 417:459, 2002 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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