yeast-hda1

Saccharomyces cerevisiae (Baker's yeast); Saccharomyces cerevisiae x Saccharomyces kudriavzevii . Histone deacetylase HDA1 (only c-term Arb2 domain)

Comment

Other strains: Saccharomyces cerevisiae (strain ATCC 204508 \/ S288c) (Baker's yeast)\; Saccharomyces cerevisiae x Saccharomyces kudriavzevii (strain VIN7) (Yeast) || Other strains: Saccharomyces cerevisiae (ATCC 204508 \/ S288c\; YJM789\; CEN.PK113-7D\; Kyokai no. 7 \/ NBRC 101557\; AWRI1631\; JAY291\; Lalvin EC1118 \/ Prise de mousse\; RM11-1a)\; Saccharomyces sp. 'boulardii\; Saccharomyces cerevisiae x Saccharomyces kudriavzevii (strain VIN7)

Relationship

Family : Arb2_domain

Block : X

Position in NCBI Life Tree : Saccharomyces cerevisiae

(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)

> cellular organisms N E > Eukaryota N E > Opisthokonta N E > Fungi N E > Dikarya N E > Ascomycota N E > saccharomyceta N E > Saccharomycotina N E > Saccharomycetes N E > Saccharomycetales N E > Saccharomycetaceae N E > Saccharomyces N E > Saccharomyces cerevisiae N E

Molecular evidence

No mutation

No kinetic

No disease

No substrate

No inhibitor

Sequence

Peptide

PLQKAIRQQQ QHYLSDEFNF VTLPLVSMDL PDNTVLCTPN ISESNTIIIV VHDTSDIWAK RNVISGTIDL SSSVIIDNSL DFIKWGLDRK YGIIDVNIPL TLFEPDNYSG MITSQEVLIY LWDNYIKYFP SVAKIAFIGI GDSYSGIVHL LGHRDTRAVT KTVINFLGDK QLKPLVPLVD ETLSEWYFKN SLIFSNNSHQ CWKENESRKP RKKFGRVLRC DTDGLNNIIE ERFEEATDFI LDSFEEWSDE E

References (12)

Title : Structural and histone binding ability characterization of the ARB2 domain of a histone deacetylase Hda1 from Saccharomyces cerevisiae - Shen_2016_Sci.Rep_6_33905
Author(s) : Shen H , Zhu Y , Wang C , Yan H , Teng M , Li X
Ref : Sci Rep , 6 :33905 , 2016
PubMedID: 27665728
Gene_locus related to this paper: yeast-hda1

Title : The reference genome sequence of Saccharomyces cerevisiae: then and now - Engel_2014_G3.(Bethesda)_4_389
Author(s) : Engel SR , Dietrich FS , Fisk DG , Binkley G , Balakrishnan R , Costanzo MC , Dwight SS , Hitz BC , Karra K , Nash RS , Weng S , Wong ED , Lloyd P , Skrzypek MS , Miyasato SR , Simison M , Cherry JM
Ref : G3 (Bethesda) , 4 :389 , 2014
PubMedID: 24374639
Gene_locus related to this paper: yeast-hda1 , yeast-ymc0

Title : De novo sequencing, assembly and analysis of the genome of the laboratory strain Saccharomyces cerevisiae CEN.PK113-7D, a model for modern industrial biotechnology - Nijkamp_2012_Microb.Cell.Fact_11_36
Author(s) : Nijkamp JF , van den Broek M , Datema E , de Kok S , Bosman L , Luttik MA , Daran-Lapujade P , Vongsangnak W , Nielsen J , Heijne WH , Klaassen P , Paddon CJ , Platt D , Kotter P , van Ham RC , Reinders MJ , Pronk JT , de Ridder D , Daran JM
Ref : Microb Cell Fact , 11 :36 , 2012
PubMedID: 22448915
Gene_locus related to this paper: yeast-YDR428C , yeast-hda1

Title : The genome sequence of the wine yeast VIN7 reveals an allotriploid hybrid genome with Saccharomyces cerevisiae and Saccharomyces kudriavzevii origins - Borneman_2012_FEMS.Yeast.Res_12_88
Author(s) : Borneman AR , Desany BA , Riches D , Affourtit JP , Forgan AH , Pretorius IS , Egholm M , Chambers PJ
Ref : FEMS Yeast Res , 12 :88 , 2012
PubMedID: 22136070
Gene_locus related to this paper: sacck-h0gtd1 , yeast-hda1

Title : Whole-genome sequencing of sake yeast Saccharomyces cerevisiae Kyokai no. 7 - Akao_2011_DNA.Res_18_423
Author(s) : Akao T , Yashiro I , Hosoyama A , Kitagaki H , Horikawa H , Watanabe D , Akada R , Ando Y , Harashima S , Inoue T , Inoue Y , Kajiwara S , Kitamoto K , Kitamoto N , Kobayashi O , Kuhara S , Masubuchi T , Mizoguchi H , Nakao Y , Nakazato A , Namise M , Oba T , Ogata T , Ohta A , Sato M , Shibasaki S , Takatsume Y , Tanimoto S , Tsuboi H , Nishimura A , Yoda K , Ishikawa T , Iwashita K , Fujita N , Shimoi H
Ref : DNA Research , 18 :423 , 2011
PubMedID: 21900213
Gene_locus related to this paper: yeast-YDR428C , yeast-hda1

Title : Eukaryote-to-eukaryote gene transfer events revealed by the genome sequence of the wine yeast Saccharomyces cerevisiae EC1118 - Novo_2009_Proc.Natl.Acad.Sci.U.S.A_106_16333
Author(s) : Novo M , Bigey F , Beyne E , Galeote V , Gavory F , Mallet S , Cambon B , Legras JL , Wincker P , Casaregola S , Dequin S
Ref : Proc Natl Acad Sci U S A , 106 :16333 , 2009
PubMedID: 19805302
Gene_locus related to this paper: yeast-AIM2 , yeast-BST1 , yeast-cbpy1 , yeast-cld1 , yeast-dap1 , yeast-dap2 , yeast-dlhh , yeast-ECM18 , yeast-FSH1 , yeast-FSH3 , yeast-ict1 , yeast-kex01 , yeast-MCFS1 , yeast-MCFS2 , yeast-met2 , yeast-mgll , yeast-pdat , yeast-ppme1 , yeast-ROG1 , yeast-SAY1 , yeast-tgl1 , yeast-tgl2 , yeast-yby9 , yeast-YDL109C , yeast-YDR428C , yeast-YDR444W , yeast-yg19 , yeast-yj77 , yeast-yjg8 , yeast-YLL012W , yeast-YLR020C , yeast-YLR118c , yeast-ym60 , yeast-ynl5 , yeast-yo059 , yeast-YPR147C , yeast-hda1

Title : Global analysis of protein expression in yeast - Ghaemmaghami_2003_Nature_425_737
Author(s) : Ghaemmaghami S , Huh WK , Bower K , Howson RW , Belle A , Dephoure N , O'Shea EK , Weissman JS
Ref : Nature , 425 :737 , 2003
PubMedID: 14562106
Gene_locus related to this paper: yeast-AIM2 , yeast-ECM18 , yeast-FSH1 , yeast-FSH2 , yeast-MCFS1 , yeast-MCFS2 , yeast-mgll , yeast-YDL109C , yeast-YDR444W , yeast-yfd4 , yeast-yjg8 , yeast-YLR118c , yeast-yo059 , yeast-YPR147C , yeast-hda1 , yeast-ymc0

Title : HDA1 and RPD3 are members of distinct yeast histone deacetylase complexes that regulate silencing and transcription - Rundlett_1996_Proc.Natl.Acad.Sci.U.S.A_93_14503
Author(s) : Rundlett SE , Carmen AA , Kobayashi R , Bavykin S , Turner BM , Grunstein M
Ref : Proc Natl Acad Sci U S A , 93 :14503 , 1996
PubMedID: 8962081
Gene_locus related to this paper: yeast-hda1