Gene_Locus Report

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Gene_locus Report for: arath-pae2

Arabidopsis thaliana (Mouse-ear cress). Pectin acetylesterase 2 At1g57590/T8L23_6 AtPAE2

Relationship
Family|Pectinacetylesterase-Notum
Block| X
Position in NCBI Life Tree|Arabidopsis thaliana
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Viridiplantae: N E > Streptophyta: N E > Streptophytina: N E > Embryophyta: N E > Tracheophyta: N E > Euphyllophyta: N E > Spermatophyta: N E > Magnoliophyta: N E > Mesangiospermae: N E > eudicotyledons: N E > Gunneridae: N E > Pentapetalae: N E > rosids: N E > malvids: N E > Brassicales: N E > Brassicaceae: N E > Camelineae: N E > Arabidopsis: N E > Arabidopsis thaliana: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
3 Genbank : AC079733, CP002684, AY123981
1 UniProt : F4I839
1 UniProt : F4I839
1 Interpro : F4I839
1 Prodom : F4I839
1 Pfam : F4I839
1 PIRSF : F4I839
1 SUPERFAM : F4I839
1 Tair database : At1g57590
Sequence
Graphical view for this peptide sequence: arath-pae2
Colored MSA for Pectinacetylesterase-Notum (raw)
MLLSHSRSPYKPRYVIKSKTSMIKKCKMKKLLWSWIILFNIHVNGMMMEF
DEMEWFTVFNGTKVFQTQNDVFSEAKFPMVGLTLIQSAAAKGAVCLDGSL
PGYHLHRGFGSGANNWLVQLEGGGWCDTIRNCVYRKTTRRGSSSYMEKEI
PFTGILSDKAADNPDFYNWNRVKVRYCDGGSFSGDSENKAAQLQFRGKRI
WLAAMEDLMAKGMRQAKQALLSGCSAGGLAVILRCDDFGKLFPPSTRVKC
LSDAGFFLDAIDVSGGRSLRRLYAGVVRLQNLQTNLPQYCVNRLNPTSCF
FPQNLINQVKTPLFILNAAYDSWQIQESLAPKSADPSGSWNDCRLNYAKC
SASQIQFLQGFRTRMVNLVKGFAMPSKNGVFLNSCFAHCQTERHDTWFAQ
NSPAIKNKGIAVAVGDWYFERGGAKLIDCAYPCDKTCHNLVFRR
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MLLSHSRSPYKPRYVIKSKTSMIKKCKMKKLLWSWIILFNIHVNGMMMEF
DEMEWFTVFNGTKVFQTQNDVFSEAKFPMVGLTLIQSAAAKGAVCLDGSL
PGYHLHRGFGSGANNWLVQLEGGGWCDTIRNCVYRKTTRRGSSSYMEKEI
PFTGILSDKAADNPDFYNWNRVKVRYCDGGSFSGDSENKAAQLQFRGKRI
WLAAMEDLMAKGMRQAKQALLSGCSAGGLAVILRCDDFGKLFPPSTRVKC
LSDAGFFLDAIDVSGGRSLRRLYAGVVRLQNLQTNLPQYCVNRLNPTSCF
FPQNLINQVKTPLFILNAAYDSWQIQESLAPKSADPSGSWNDCRLNYAKC
SASQIQFLQGFRTRMVNLVKGFAMPSKNGVFLNSCFAHCQTERHDTWFAQ
NSPAIKNKGIAVAVGDWYFERGGAKLIDCAYPCDKTCHNLVFRR


References
1 more
    Title: Plant pectin acetylesterase structure and function: new insights from bioinformatic analysis
    Philippe F, Pelloux J, Rayon C
    Ref: BMC Genomics, 18:456, 2017 : PubMed

            

    Title: Empirical analysis of transcriptional activity in the Arabidopsis genome
    Yamada K, Lim J, Dale JM, Chen H, Shinn P, Palm CJ, Southwick AM, Wu HC, Kim C and Ecker JR <60 more author(s)>
    Ref: Science, 302:842, 2003 : PubMed

            

    Title: Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana
    Theologis A, Ecker JR, Palm CJ, Federspiel NA, Kaul S, White O, Alonso J, Altafi H, Araujo R and Davis RW <79 more author(s)>
    Ref: Nature, 408:816, 2000 : PubMed

            


Other Papers


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Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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