Gene_Locus Report

Biblio print

Add to basket

Go to basket

Tree Display

AceDB Schema

XML Display

Feedback

Gene_locus Report for: leima-q4q398

Leishmania major, Leishmania mexicana, Leishmania infantum, Leishmania donovani, hypothetical protein

Comment
Other strains: Leishmania mexicana (strain MHOM/GT/2001/U1103), Leishmania infantum, Leishmania donovani (strain BPK282A1)


Relationship
Family|Lipase_3
Block| L
Position in NCBI Life Tree|Leishmania major
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Euglenozoa: N E > Kinetoplastida: N E > Trypanosomatidae: N E > Leishmaniinae: N E > Leishmania [genus]: N E > Leishmania [subgenus]: N E > Leishmania major species complex: N E > Leishmania major: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : CT005271
>3 UniProt links 1 more: Q4Q398, E9B4S9, A4I9Q5
>3 UniProt links 1 more: Q4Q398, E9B4S9, A4I9Q5
>3 Interpro links 1 more: Q4Q398, E9B4S9, A4I9Q5
>3 Prodom links 1 more: Q4Q398, E9B4S9, A4I9Q5
>3 Pfam links 1 more: Q4Q398, E9B4S9, A4I9Q5
>3 PIRSF links 1 more: Q4Q398, E9B4S9, A4I9Q5
>3 SUPERFAM links 1 more: Q4Q398, E9B4S9, A4I9Q5
Sequence
Graphical view for this peptide sequence: leima-q4q398
Colored MSA for Lipase_3 (raw)
GTDMFSFTDFLFNTNVFFEVVLYQLMTTMIPGTVVVPKDLIVDLLRTASL
PADSYGDVYETWTELTRSGNHSLRRCQQNNFRRDFFADLYNHIAYVGSRP
THPRHLLLTGHSLGGAVAAIVAAQMRVKAVAFSAPGIALARKKFNLPLRS
INENIMTVVSSNDIVPAVGEHGGELHHVECLAATRELCHAMEFMIGSLWR
SCSSVRSRFPSIKDVV
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

GTDMFSFTDFLFNTNVFFEVVLYQLMTTMIPGTVVVPKDLIVDLLRTASL
PADSYGDVYETWTELTRSGNHSLRRCQQNNFRRDFFADLYNHIAYVGSRP
THPRHLLLTGHSLGGAVAAIVAAQMRVKAVAFSAPGIALARKKFNLPLRS
INENIMTVVSSNDIVPAVGEHGGELHHVECLAATRELCHAMEFMIGSLWR
SCSSVRSRFPSIKDVV


References
    Title: Comparative genomic analysis of three Leishmania species that cause diverse human disease
    Peacock CS, Seeger K, Harris D, Murphy L, Ruiz JC, Quail MA, Peters N, Adlem E, Tivey A and Berriman M <32 more author(s)>
    Ref: Nat Genet, 39:839, 2007 : PubMed

            

    Title: The genome of the kinetoplastid parasite, Leishmania major
    Ivens AC, Peacock CS, Worthey EA, Murphy L, Aggarwal G, Berriman M, Sisk E, Rajandream MA, Adlem E and Myler PJ <91 more author(s)>
    Ref: Science, 309:436, 2005 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
webmaster

Acknowledgements and disclaimer