Gene_Locus Report

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Gene_locus Report for: schpo-APTH1

Schizosaccharomyces pombe lysophoshpholipase YFQ4 APTH1 on chromosome I cosmid c8E11

Relationship
Family|LYsophospholipase_carboxylesterase
Block| X
Position in NCBI Life Tree|Schizosaccharomyces pombe
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Fungi: N E > Dikarya: N E > Ascomycota: N E > Taphrinomycotina: N E > Schizosaccharomycetes: N E > Schizosaccharomycetales: N E > Schizosaccharomycetaceae: N E > Schizosaccharomyces: N E > Schizosaccharomyces pombe: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : AL021817
1 UniProt : O42881
1 Ncbi-nid : 6491839
1 Ncbi-pid : 2887333
1 UniProt : O42881
1 Interpro : O42881
1 Prodom : O42881
1 Pfam : O42881
1 PIRSF : O42881
1 SUPERFAM : O42881
Sequence
Graphical view for this peptide sequence: schpo-APTH1
Colored MSA for LYsophospholipase_carboxylesterase (raw)
MTAKLNSVIINPSVAHTATVIFLHGLGDSGQGWSFMANTWSNFKHIKWIF
PNAPSIPVTVNNGMKMPAWYDIYSFADMKREDENGILRSAGQLHELIDAE
LALGIPSDRILIGGFSQGCMVSLYAGLTYPKRLAGIMGHSGFLPLASKFP
SALSRVAKEIPILLTYMTEDPIVPSVLSSASAKYLINNLQLKCLDRPFEG
DAHSLSSESFMAMYKFTQTVIGSP
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MTAKLNSVIINPSVAHTATVIFLHGLGDSGQGWSFMANTWSNFKHIKWIF
PNAPSIPVTVNNGMKMPAWYDIYSFADMKREDENGILRSAGQLHELIDAE
LALGIPSDRILIGGFSQGCMVSLYAGLTYPKRLAGIMGHSGFLPLASKFP
SALSRVAKEIPILLTYMTEDPIVPSVLSSASAKYLINNLQLKCLDRPFEG
DAHSLSSESFMAMYKFTQTVIGSP


References
    Title: ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe
    Matsuyama A, Arai R, Yashiroda Y, Shirai A, Kamata A, Sekido S, Kobayashi Y, Hashimoto A, Hamamoto M and Yoshida M <2 more author(s)>
    Ref: Nat Biotechnol, 24:841, 2006 : PubMed

            

    Title: The genome sequence of Schizosaccharomyces pombe
    Wood V, Gwilliam R, Rajandream MA, Lyne M, Lyne R, Stewart A, Sgouros J, Peat N, Hayles J and Nurse P <124 more author(s)>
    Ref: Nature, 415:871, 2002 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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