Gene_Locus Report

Biblio print

Add to basket

Go to basket

Tree Display

AceDB Schema

XML Display

Feedback

Gene_locus Report for: schpo-C23C4.16C

Schizosaccharomyces pombe (Fission yeast) hypothetical 47.9 kda protein c23c4.16c in chromosome I (autophagy-related protein 15)

Relationship
Family|Lipase_3
Block| L
Position in NCBI Life Tree|Schizosaccharomyces pombe
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Fungi: N E > Dikarya: N E > Ascomycota: N E > Taphrinomycotina: N E > Schizosaccharomycetes: N E > Schizosaccharomycetales: N E > Schizosaccharomycetaceae: N E > Schizosaccharomyces: N E > Schizosaccharomyces pombe: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : Z99753
1 UniProt : O13934
1 UniProt : O13934
1 Interpro : O13934
1 Prodom : O13934
1 Pfam : O13934
1 PIRSF : O13934
1 SUPERFAM : O13934
Sequence
Graphical view for this peptide sequence: schpo-C23C4.16C
Colored MSA for Lipase_3 (raw)
MSQLLFLRRFFFLFCFIIRISCTGVFESVIKSSENVPDKVNVKLQHVFHY
GLNEDSISYYRLDVAKKSVYAESESKLPLKMKKGYSVHLKDQSRDALTDY
RYKSMKGIYSEANSPADLWEQEAIVIPDITDKETIYSLGKMSYNAYQKIP
FDGDWLDLGPDWNITPPEGFGWEEDGLRGHVFSNDDNSTIIIAMKGTSIF
GIGRGTSQKDRVNDNLLFSCCCARVSWAWSTVCGCYKNTYTCSQTCLEDE
VQDDSRYYSASLDIFYSVKELYPDAQIWLTGHSLGGATAALMGLSFGIPT
VTFEAPGDRMAARRLHLPMPPGLPDEESLVWHFGHNADPIYLGKCTGPTS
LCWAGGYAMESTCHTGQECLYDVVKDKGWHLSITHHRMQTVLNDVIDAYE
KLPDCSHTPNCVDCYLWEFPDDDS
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MSQLLFLRRFFFLFCFIIRISCTGVFESVIKSSENVPDKVNVKLQHVFHY
GLNEDSISYYRLDVAKKSVYAESESKLPLKMKKGYSVHLKDQSRDALTDY
RYKSMKGIYSEANSPADLWEQEAIVIPDITDKETIYSLGKMSYNAYQKIP
FDGDWLDLGPDWNITPPEGFGWEEDGLRGHVFSNDDNSTIIIAMKGTSIF
GIGRGTSQKDRVNDNLLFSCCCARVSWAWSTVCGCYKNTYTCSQTCLEDE
VQDDSRYYSASLDIFYSVKELYPDAQIWLTGHSLGGATAALMGLSFGIPT
VTFEAPGDRMAARRLHLPMPPGLPDEESLVWHFGHNADPIYLGKCTGPTS
LCWAGGYAMESTCHTGQECLYDVVKDKGWHLSITHHRMQTVLNDVIDAYE
KLPDCSHTPNCVDCYLWEFPDDDS


Reference
    Title: The genome sequence of Schizosaccharomyces pombe
    Wood V, Gwilliam R, Rajandream MA, Lyne M, Lyne R, Stewart A, Sgouros J, Peat N, Hayles J and Nurse P <124 more author(s)>
    Ref: Nature, 415:871, 2002 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
webmaster

Acknowledgements and disclaimer