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Gene_locus Report for: lismo-LMO0951

Listeria monocytogenes, Listeria marthii, hypothetical protein lmo0951

Comment
Other strains: Listeria monocytogenes (FSL N1-017; FSL R2-503; F6900; FSL F2-208; HPB2262; FSL N3-165; FSL J1-194; FSL J2-071; J2818; serotypes: 4a (HCC23; L99), 4b (H7858; F2365; CLIP80459), 1/2a (08-5578; ATCC BAA-679 / EGD-e; 08-5923; F6854)), Listeria marthii FSL S4-120


Relationship
Family|Duf_915
Block| X
Position in NCBI Life Tree|Listeria monocytogenes
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Terrabacteria group: N E > Firmicutes: N E > Bacilli: N E > Bacillales: N E > Listeriaceae: N E > Listeria: N E > Listeria monocytogenes: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
>3 Genbank links 1 more: AE017325, AL591977, AADR01000055
1 UniProt : Q8Y8F3
1 UniProt : Q8Y8F3
1 Interpro : Q8Y8F3
1 Prodom : Q8Y8F3
1 Pfam : Q8Y8F3
1 PIRSF : Q8Y8F3
1 SUPERFAM : Q8Y8F3
Sequence
Graphical view for this peptide sequence: lismo-LMO0951
Colored MSA for Duf_915 (raw)
MLKRVFFSIILPLGCLVGAIFILLTINTTYPKAANDSIPTIFIHGYRGTD
RSLHGMIRRFDQKYDWGTESLTVNVSPDGEISTTGTYNKKEKNPLINIVF
EDNRATLPQQSMWTKKVMSYLQQNYAIKKFNAVGHSMGGGAWVSYLASYE
KNKSYPQVNKIVFLAVPFYPEEYVNGDQQVDIKNANNVHAKFAEKMAKVL
PNNTEIMIIGGNLEDGSNSDGEVKLDSVLYGEKLFAHQKVTTHVIKGPQA
THSSMHESTVVDKYVGQFLWGEK
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MLKRVFFSIILPLGCLVGAIFILLTINTTYPKAANDSIPTIFIHGYRGTD
RSLHGMIRRFDQKYDWGTESLTVNVSPDGEISTTGTYNKKEKNPLINIVF
EDNRATLPQQSMWTKKVMSYLQQNYAIKKFNAVGHSMGGGAWVSYLASYE
KNKSYPQVNKIVFLAVPFYPEEYVNGDQQVDIKNANNVHAKFAEKMAKVL
PNNTEIMIIGGNLEDGSNSDGEVKLDSVLYGEKLFAHQKVTTHVIKGPQA
THSSMHESTVVDKYVGQFLWGEK


References
3 more
    Title: Genome sequence of lineage III Listeria monocytogenes strain HCC23
    Steele CL, Donaldson JR, Paul D, Banes MM, Arick T, Bridges SM, Lawrence ML
    Ref: Journal of Bacteriology, 193:3679, 2011 : PubMed

            

    Title: Whole genome comparisons of serotype 4b and 1/2a strains of the food-borne pathogen Listeria monocytogenes reveal new insights into the core genome components of this species
    Nelson KE, Fouts DE, Mongodin EF, Ravel J, DeBoy RT, Kolonay JF, Rasko DA, Angiuoli SV, Gill SR and Fraser CM <23 more author(s)>
    Ref: Nucleic Acids Research, 32:2386, 2004 : PubMed

            

    Title: Comparative genomics of Listeria species
    Glaser P, Frangeul L, Buchrieser C, Rusniok C, Amend A, Baquero F, Berche P, Bloecker H, Brandt P and Cossart P <45 more author(s)>
    Ref: Science, 294:849, 2001 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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