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arath-B9DFR3

Arabidopsis thaliana (Mouse-ear cress). Pectin acetylesterase 9 AtPAE9

Comment

Relationship

Family : Pectinacetylesterase-Notum

Block : X

Position in NCBI Life Tree : Arabidopsis thaliana

(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)

> cellular organisms N E > Eukaryota N E > Viridiplantae N E > Streptophyta N E > Streptophytina N E > Embryophyta N E > Tracheophyta N E > Euphyllophyta N E > Spermatophyta N E > Magnoliophyta N E > Mesangiospermae N E > eudicotyledons N E > Gunneridae N E > Pentapetalae N E > rosids N E > malvids N E > Brassicales N E > Brassicaceae N E > Camelineae N E > Arabidopsis N E > Arabidopsis thaliana N E

Molecular evidence

No mutation

No structure

No kinetic

No disease

No substrate

No inhibitor

Database

Sequence

Peptide

MKTTTRLLDL TAAMVLVVYV SFSPPLVSGE PGRRVSMTLV RDAAALGAFC LDGSLPAYHL DRGFGAGSNN WILQFEGGGW CNDIASCVER AKTRRGSTRY MSKTVVFTGV LSNNASQNPD FYNWNKVRLR YCDGASFAGD SQFGNGTSLL YFRGQRIWNA IILDLLPKGL AKAHKALLTG CSAGGLSTFL HCDNFTSYLP KNASVKCMSD AGFFLDAIDV AANRTMRSFY SQLVSLQGIQ KNLDPSCTHA FFPEPSLCFF PQYVLRFIKT PFFILNSAYD VFQFHHGLVP PSADQTGRWN RCKLNVTACN PHQLDALQGF RKDMLGALMN FFRNSTRGGM FINSCFDHCQ SALEETWLSP TSPRINNKTI AETVGDWYFG RGEEAKEIGC PYPCDKTCHN LIPASTSDFL ASNASGSGHN SRGTHLTFLF LLLNFFFFFV ISKFSKKDYV T

References (6)

Title : Plant pectin acetylesterase structure and function: new insights from bioinformatic analysis - Philippe_2017_BMC.Genomics_18_456
Author(s) : Philippe F , Pelloux J , Rayon C
Ref : BMC Genomics , 18 :456 , 2017
Abstract :
PubMedSearch : Philippe_2017_BMC.Genomics_18_456
PubMedID: 28595570
Gene_locus related to this paper: arath-o65713 , arath-o80731 , arath-q8lae9 , arath-Q84JS1 , arath-Q9SFF6 , arath-q9sr22 , arath-q9sr23 , arath-q66gm8 , arath-f4jt64 , arath-B9DFR3 , arath-pae2 , arath-pae1

Title : Identification and functional characterization of the distinct plant pectin esterases PAE8 and PAE9 and their deletion mutants - de Souza_2014_Planta_240_1123
Author(s) : de Souza A , Hull PA , Gille S , Pauly M
Ref : Planta , 240 :1123 , 2014
Abstract :
PubMedSearch : de Souza_2014_Planta_240_1123
PubMedID: 25115560
Gene_locus related to this paper: arath-o65713 , arath-B9DFR3 , arath-pae2 , arath-pae1

Title : Analysis of multiple occurrences of alternative splicing events in Arabidopsis thaliana using novel sequenced full-length cDNAs - Iida_2009_DNA.Res_16_155
Author(s) : Iida K , Fukami-Kobayashi K , Toyoda A , Sakaki Y , Kobayashi M , Seki M , Shinozaki K
Ref : DNA Research , 16 :155 , 2009
Abstract :
PubMedSearch : Iida_2009_DNA.Res_16_155
PubMedID: 19423640
Gene_locus related to this paper: arath-AT2G42690 , arath-AT5G20060 , arath-eds1 , arath-MES2 , arath-o65713 , arath-pip , arath-Q8LFB7 , arath-q66gm8 , arath-B9DFR3

Title : Empirical analysis of transcriptional activity in the Arabidopsis genome - Yamada_2003_Science_302_842
Author(s) : Yamada K , Lim J , Dale JM , Chen H , Shinn P , Palm CJ , Southwick AM , Wu HC , Kim C , Nguyen M , Pham P , Cheuk R , Karlin-Newmann G , Liu SX , Lam B , Sakano H , Wu T , Yu G , Miranda M , Quach HL , Tripp M , Chang CH , Lee JM , Toriumi M , Chan MM , Tang CC , Onodera CS , Deng JM , Akiyama K , Ansari Y , Arakawa T , Banh J , Banno F , Bowser L , Brooks S , Carninci P , Chao Q , Choy N , Enju A , Goldsmith AD , Gurjal M , Hansen NF , Hayashizaki Y , Johnson-Hopson C , Hsuan VW , Iida K , Karnes M , Khan S , Koesema E , Ishida J , Jiang PX , Jones T , Kawai J , Kamiya A , Meyers C , Nakajima M , Narusaka M , Seki M , Sakurai T , Satou M , Tamse R , Vaysberg M , Wallender EK , Wong C , Yamamura Y , Yuan S , Shinozaki K , Davis RW , Theologis A , Ecker JR
Ref : Science , 302 :842 , 2003
Abstract :
PubMedSearch : Yamada_2003_Science_302_842
PubMedID: 14593172
Gene_locus related to this paper: arath-AT2G42690 , arath-AT4g30610 , arath-At5g13640 , arath-AT5G20520 , arath-AT5G27320 , arath-CGEP , arath-clh1 , arath-clh2 , arath-CXE12 , arath-CXE15 , arath-SCP25 , arath-F14F8.240 , arath-MES6 , arath-LCAT1 , arath-PLA11 , arath-PLA15 , arath-PLA16 , arath-PLA17 , arath-SCP8 , arath-SCP11 , arath-SCP40 , arath-MES14 , arath-AXR4 , arath-SFGH , arath-B9DFR3 , arath-pae2

Title : Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana - Tabata_2000_Nature_408_823
Author(s) : Tabata S , Kaneko T , Nakamura Y , Kotani H , Kato T , Asamizu E , Miyajima N , Sasamoto S , Kimura T , Hosouchi T , Kawashima K , Kohara M , Matsumoto M , Matsuno A , Muraki A , Nakayama S , Nakazaki N , Naruo K , Okumura S , Shinpo S , Takeuchi C , Wada T , Watanabe A , Yamada M , Yasuda M , Sato S , de la Bastide M , Huang E , Spiegel L , Gnoj L , O'Shaughnessy A , Preston R , Habermann K , Murray J , Johnson D , Rohlfing T , Nelson J , Stoneking T , Pepin K , Spieth J , Sekhon M , Armstrong J , Becker M , Belter E , Cordum H , Cordes M , Courtney L , Courtney W , Dante M , Du H , Edwards J , Fryman J , Haakensen B , Lamar E , Latreille P , Leonard S , Meyer R , Mulvaney E , Ozersky P , Riley A , Strowmatt C , Wagner-McPherson C , Wollam A , Yoakum M , Bell M , Dedhia N , Parnell L , Shah R , Rodriguez M , See LH , Vil D , Baker J , Kirchoff K , Toth K , King L , Bahret A , Miller B , Marra M , Martienssen R , McCombie WR , Wilson RK , Murphy G , Bancroft I , Volckaert G , Wambutt R , Dusterhoft A , Stiekema W , Pohl T , Entian KD , Terryn N , Hartley N , Bent E , Johnson S , Langham SA , McCullagh B , Robben J , Grymonprez B , Zimmermann W , Ramsperger U , Wedler H , Balke K , Wedler E , Peters S , van Staveren M , Dirkse W , Mooijman P , Lankhorst RK , Weitzenegger T , Bothe G , Rose M , Hauf J , Berneiser S , Hempel S , Feldpausch M , Lamberth S , Villarroel R , Gielen J , Ardiles W , Bents O , Lemcke K , Kolesov G , Mayer K , Rudd S , Schoof H , Schueller C , Zaccaria P , Mewes HW , Bevan M , Fransz P
Ref : Nature , 408 :823 , 2000
Abstract :
PubMedSearch : Tabata_2000_Nature_408_823
PubMedID: 11130714
Gene_locus related to this paper: arath-At5g11650 , arath-At5g16120 , arath-at5g18630 , arath-AT5G20520 , arath-At5g21950 , arath-AT5G27320 , arath-CXE15 , arath-F1N13.220 , arath-F14F8.240 , arath-q3e9e4 , arath-q8lae9 , arath-Q8LFB7 , arath-q9ffg7 , arath-q9fij5 , arath-Q9LVU7 , arath-q66gm8 , arath-SCPL34 , arath-B9DFR3 , arath-a0a1p8bcz0

Title : Structural analysis of Arabidopsis thaliana chromosome 5. I. Sequence features of the 1.6 Mb regions covered by twenty physically assigned P1 clones - Sato_1997_DNA.Res_4_215
Author(s) : Sato S , Kotani H , Nakamura Y , Kaneko T , Asamizu E , Fukami M , Miyajima N , Tabata S
Ref : DNA Research , 4 :215 , 1997
Abstract :
PubMedSearch : Sato_1997_DNA.Res_4_215
PubMedID: 9330910
Gene_locus related to this paper: arath-AT5G38220 , arath-At5g38520 , arath-Q8LFB7 , arath-Q9FF27 , arath-q9ffg7 , arath-Q9FFZ1 , arath-SCP47 , arath-B9DFR3