Gene_Locus Report

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Gene_locus Report for: lismo-LMO0493

Listeria monocytogenes, Listeria seeligeri, hypothetical protein lmo0493

Comment
Other strains: Listeria monocytogenes (and strains 4b f2365; 1/2a F6854; 4b H7858; FSL N1-017; F6900; FSL J1-194; FSL R2-503; HPB2262; serovar 1/2a (strain ATCC BAA-679 / EGD-e; 08-5923; 08-5578); serotype 4b (strain CLIP80459); J2818;), Listeria seeligeri FSL S4-171


Relationship
Family|Cocaine_esterase
Block| X
Position in NCBI Life Tree|Listeria monocytogenes
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Terrabacteria group: N E > Firmicutes: N E > Bacilli: N E > Bacillales: N E > Listeriaceae: N E > Listeria: N E > Listeria monocytogenes: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
>3 Genbank links 1 more: AE017323, AL591975, AADQ01000001
1 UniProt : Q8Y9N2
1 UniProt : Q8Y9N2
1 Interpro : Q8Y9N2
1 Pfam : Q8Y9N2
1 PIRSF : Q8Y9N2
1 SUPERFAM : Q8Y9N2
Sequence
Graphical view for this peptide sequence: lismo-LMO0493
Colored MSA for Cocaine_esterase (raw)
MTAKITEKMLFSPSFEYVDNGIEHGVLSPFETKEIILEKGQQIAEGFKLL
DCSIKMLKDVPVKMRDGITIYTDIYLPITEEKVPTLIAWSPYGKSAGTAP
RYKNLFNMLGMGNAWNSGLTKFEAPDPAYWCAHGYAVCNPDMRGIAHSEG
NTTMIGSQEAEDGYDLIEWLAKQSWSNGKTALTGTSYLAFSQWYIAAEQP
PHLTCINPTEGLADGYRDLAFIGGIPDPNFIERLQINHVSAKNSQREDLT
KEMEAYPLADSAIWKDKVADPSKITIPAFVIASYSNTLHTMGTFRSWRSL
GSKEKWLRIHDRQEWPYYYDENNVEELRRFFDYYLLGKENNWTDTPTVRY
ALIDFQGGNQTDLPSEVFPPTNSENKRYYMNGLLRTLQETPTSDDFKVSY
TTENLPGRASFQMTFDKETHFVGYPKAKLFMEVDGYDDLDVFVWLQKLDK
FGNVLSEFVVPNHGAALQDFTQEGASALRYKGAWGRLRASMRQLDSQVST
DEIPAYSFDKVEKLSSGEIVELDIILSPIGLTYKAGETLRVVLSSKDELG
SVMPGTPGCTPNNKGTHILHTSKEHPSYIQLPIINK
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MTAKITEKMLFSPSFEYVDNGIEHGVLSPFETKEIILEKGQQIAEGFKLL
DCSIKMLKDVPVKMRDGITIYTDIYLPITEEKVPTLIAWSPYGKSAGTAP
RYKNLFNMLGMGNAWNSGLTKFEAPDPAYWCAHGYAVCNPDMRGIAHSEG
NTTMIGSQEAEDGYDLIEWLAKQSWSNGKTALTGTSYLAFSQWYIAAEQP
PHLTCINPTEGLADGYRDLAFIGGIPDPNFIERLQINHVSAKNSQREDLT
KEMEAYPLADSAIWKDKVADPSKITIPAFVIASYSNTLHTMGTFRSWRSL
GSKEKWLRIHDRQEWPYYYDENNVEELRRFFDYYLLGKENNWTDTPTVRY
ALIDFQGGNQTDLPSEVFPPTNSENKRYYMNGLLRTLQETPTSDDFKVSY
TTENLPGRASFQMTFDKETHFVGYPKAKLFMEVDGYDDLDVFVWLQKLDK
FGNVLSEFVVPNHGAALQDFTQEGASALRYKGAWGRLRASMRQLDSQVST
DEIPAYSFDKVEKLSSGEIVELDIILSPIGLTYKAGETLRVVLSSKDELG
SVMPGTPGCTPNNKGTHILHTSKEHPSYIQLPIINK


References
2 more
    Title: Comparative genomics of the bacterial genus Listeria: Genome evolution is characterized by limited gene acquisition and limited gene loss
    den Bakker HC, Cummings CA, Ferreira V, Vatta P, Orsi RH, Degoricija L, Barker M, Petrauskene O, Furtado MR, Wiedmann M
    Ref: BMC Genomics, 11:688, 2010 : PubMed

            

    Title: Whole genome comparisons of serotype 4b and 1/2a strains of the food-borne pathogen Listeria monocytogenes reveal new insights into the core genome components of this species
    Nelson KE, Fouts DE, Mongodin EF, Ravel J, DeBoy RT, Kolonay JF, Rasko DA, Angiuoli SV, Gill SR and Fraser CM <23 more author(s)>
    Ref: Nucleic Acids Research, 32:2386, 2004 : PubMed

            

    Title: Comparative genomics of Listeria species
    Glaser P, Frangeul L, Buchrieser C, Rusniok C, Amend A, Baquero F, Berche P, Bloecker H, Brandt P and Cossart P <45 more author(s)>
    Ref: Science, 294:849, 2001 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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