Gene_Locus Report

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Gene_locus Report for: anoga-f5hl20

Anopheles gambiae (African malaria mosquito) A. arabiensis; A. coluzzii; A. dirus; A. farauti; A. funestus; A. minimus; A. quadriannulatus; A. stephensi; A. atroparvus; A. christyi; A. culicifacies; A. epiroticus; A. melas (Mosquito, African malaria mosquito, Indo-Pakistan malaria mosquito) AGAP003238-PC -PD ensangp00000014705 ensangp00000012956

Comment
Q7QBC4 is a partial duc=plicated sequence Other strains: Anopheles gambiae (African malaria mosquito); Anopheles arabiensis; Anopheles coluzzii; Anopheles dirus; Anopheles farauti; Anopheles funestus; Anopheles minimus; Anopheles quadriannulatus; Anopheles stephensi; (Mosquito, African malaria mosquito, Indo-Pakistan malaria mosquito); Anopheles albimanus; Anopheles atroparvus; Anopheles braziliensis; Anopheles triannulatus; Anopheles darlingi; Anopheles christyi; Anopheles culicifacie; Anopheles epiroticus; Anopheles melas


Relationship
Family|Ndr_family
Block| X
Position in NCBI Life Tree|Anopheles gambiae
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Protostomia: N E > Ecdysozoa: N E > Panarthropoda: N E > Arthropoda: N E > Mandibulata: N E > Pancrustacea: N E > Hexapoda: N E > Insecta: N E > Dicondylia: N E > Pterygota: N E > Neoptera: N E > Holometabola: N E > Diptera: N E > Nematocera: N E > Culicomorpha: N E > Culicoidea: N E > Culicidae: N E > Anophelinae: N E > Anopheles [genus]: N E > Cellia: N E > Pyretophorus: N E > gambiae species complex: N E > Anopheles gambiae: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
3 Genbank : AAAB01008879, AAAB01008794, AXCM01013928
>3 UniProt links 6 more: F5HL20, F5HL19, Q7QBC4
>3 UniProt links 21 more: F5HL20, F5HL19, Q7QBC4
>3 Interpro links 21 more: F5HL20, F5HL19, Q7QBC4
>3 Prodom links 21 more: F5HL20, F5HL19, Q7QBC4
>3 Pfam links 21 more: F5HL20, F5HL19, Q7QBC4
>3 PIRSF links 21 more: F5HL20, F5HL19, Q7QBC4
>3 SUPERFAM links 21 more: F5HL20, F5HL19, Q7QBC4
Sequence
Graphical view for this peptide sequence: anoga-f5hl20
Colored MSA for Ndr_family (raw)
MEKPKVNDTASAIPVGSPSAKGVHRYAVNTEKSGEIIVTVQGDLSQQEKR
AVFLTVHDLGTNHSSFEEFVNSACMIEIKERSCFIHIDVPGHADNAPNLA
DSFQFPSLQLLGEELVTVLDFLHVKYVIGVGEGAGANVLARFGLAHPSRC
LGLILINVTGSAASVLDVFKTKFISWKGDEVGQSAEDFLLYHKFGYQLVG
DNPDKEKIVSEFQSRLHSSLNSKNLKQYVKAFMSRKDLPLKNCKVDCLLI
TGIMSPYASVVEKLYKDLNKEKVTLLKVERAGDVLADAPAKVAQSILLFC
KGQGLLTSVAMPGVDRNRAFSTSSSGSTEGSTGARRLSRGMSMEDYDKPN
IRRLSVTINEQLPPIKK
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MEKPKVNDTASAIPVGSPSAKGVHRYAVNTEKSGEIIVTVQGDLSQQEKR
AVFLTVHDLGTNHSSFEEFVNSACMIEIKERSCFIHIDVPGHADNAPNLA
DSFQFPSLQLLGEELVTVLDFLHVKYVIGVGEGAGANVLARFGLAHPSRC
LGLILINVTGSAASVLDVFKTKFISWKGDEVGQSAEDFLLYHKFGYQLVG
DNPDKEKIVSEFQSRLHSSLNSKNLKQYVKAFMSRKDLPLKNCKVDCLLI
TGIMSPYASVVEKLYKDLNKEKVTLLKVERAGDVLADAPAKVAQSILLFC
KGQGLLTSVAMPGVDRNRAFSTSSSGSTEGSTGARRLSRGMSMEDYDKPN
IRRLSVTINEQLPPIKK


Reference
    Title: The genome sequence of the malaria mosquito Anopheles gambiae
    Holt RA, Subramanian GM, Halpern A, Sutton GG, Charlab R, Nusskern DR, Wincker P, Clark AG, Ribeiro JM and Hoffman SL <113 more author(s)>
    Ref: Science, 298:129, 2002 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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