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Gene_locus Report for: rat-a0a0g2k9y7

Rattus norvegicus (Rat). Carboxylic ester hydrolase

Relationship
Family|Carb_B_Chordata
Block| C
Position in NCBI Life Tree|Rattus norvegicus
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Deuterostomia: N E > Chordata: N E > Craniata: N E > Vertebrata: N E > Gnathostomata: N E > Teleostomi: N E > Euteleostomi: N E > Sarcopterygii: N E > Dipnotetrapodomorpha: N E > Tetrapoda: N E > Amniota: N E > Mammalia: N E > Theria: N E > Eutheria: N E > Boreoeutheria: N E > Euarchontoglires: N E > Glires: N E > Rodentia: N E > Myomorpha: N E > Muroidea: N E > Muridae: N E > Murinae: N E > Rattus: N E > Rattus norvegicus: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
Sequence
Graphical view for this peptide sequence: rat-a0a0g2k9y7
Colored MSA for Carb_B_Chordata (raw)
GNPSSPPVVDTMKGKVLGKYASLEGVTQSVAVFLGVPFAKPPLGSLRFAP
PQPAEPWSFVKNTTTYPPMCSQDPVAGQKVNDLLTEENIPLKFSEDCLYL
NIYMPADLTKHDRLPVMVWIHGGGLVLGGASTYDGLALSTHENVVVVVIQ
YRLGIWGFFSTGDEHSRGNWGHLDQVAALHWVQDNIDNFGGDPGSVTIFG
ESAGGESVSVLVLSPLAKNLFHKAISESGVALTAGLVKKNTRPLAEKIAV
VSGCKSTTSAAMVHCLRQKTEEELLETTLKLNLFSLDLHGDSRQSYPFVP
TVLDGVVLPKMPEEILAENDFNIVPYIVGINKQEFGWILPTMMNYPPSDM
KLDPMTATSLLKKSSFLLNLPEEAIPVAVEKYLRHTDDPDRNKDQLLELI
GDVIFGVPSVIVSRGHRDAGARTYMYEFQYRPSFSSKMKPSTVVGDHGAL
EIYSVFGILILTGGTSEEEINLSKMMMKFWANFARNRNPNGEGLPHWPEY
DQKEGYLQIGATTQQAQKLKGEEVAFWTELLAKNPPQTEHTEHT
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

GNPSSPPVVDTMKGKVLGKYASLEGVTQSVAVFLGVPFAKPPLGSLRFAP
PQPAEPWSFVKNTTTYPPMCSQDPVAGQKVNDLLTEENIPLKFSEDCLYL
NIYMPADLTKHDRLPVMVWIHGGGLVLGGASTYDGLALSTHENVVVVVIQ
YRLGIWGFFSTGDEHSRGNWGHLDQVAALHWVQDNIDNFGGDPGSVTIFG
ESAGGESVSVLVLSPLAKNLFHKAISESGVALTAGLVKKNTRPLAEKIAV
VSGCKSTTSAAMVHCLRQKTEEELLETTLKLNLFSLDLHGDSRQSYPFVP
TVLDGVVLPKMPEEILAENDFNIVPYIVGINKQEFGWILPTMMNYPPSDM
KLDPMTATSLLKKSSFLLNLPEEAIPVAVEKYLRHTDDPDRNKDQLLELI
GDVIFGVPSVIVSRGHRDAGARTYMYEFQYRPSFSSKMKPSTVVGDHGAL
EIYSVFGILILTGGTSEEEINLSKMMMKFWANFARNRNPNGEGLPHWPEY
DQKEGYLQIGATTQQAQKLKGEEVAFWTELLAKNPPQTEHTEHT


Reference
    Title: Genome sequence of the Brown Norway rat yields insights into mammalian evolution
    Gibbs RA, Weinstock GM, Metzker ML, Muzny DM, Sodergren EJ, Scherer S, Scott G, Steffen D, Worley KC and Collins F <218 more author(s)>
    Ref: Nature, 428:493, 2004 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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