Gene_Locus Report

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Gene_locus Report for: rat-d4a1b6

Rattus norvegicus (Rat). Similar to 1110065L07Rik protein (Predicted), isoform CRA_b

Relationship
Family|ABHD13-BEM46
Block| X
Position in NCBI Life Tree|Rattus norvegicus
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Deuterostomia: N E > Chordata: N E > Craniata: N E > Vertebrata: N E > Gnathostomata: N E > Teleostomi: N E > Euteleostomi: N E > Sarcopterygii: N E > Dipnotetrapodomorpha: N E > Tetrapoda: N E > Amniota: N E > Mammalia: N E > Theria: N E > Eutheria: N E > Boreoeutheria: N E > Euarchontoglires: N E > Glires: N E > Rodentia: N E > Myomorpha: N E > Muroidea: N E > Muridae: N E > Murinae: N E > Rattus: N E > Rattus norvegicus: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
>3 Genbank links 4 more: AABR07026596, CH473970, NP_001258001
1 UniProt : D4A1B6
1 UniProt : D4A1B6
1 Interpro : D4A1B6
1 Pfam : D4A1B6
1 PIRSF : D4A1B6
1 SUPERFAM : D4A1B6
Sequence
Graphical view for this peptide sequence: rat-d4a1b6
Colored MSA for ABHD13-BEM46 (raw)
MEKPWMLWSFIERWLLALVSWSWALCRISLLPLIVTFHLYGGIVLLLLIF
VSIAGILYKFQDVLLYFPEQPSSSRLYVPMPTGIPHENIFIRTKDGVRLN
LILVRYTGDNSPYCPTIIYFHGNAGNIGHRLPNALLMLVNLKVNLVLVDY
RGYGKSEGEASEEGLYLDSEAVLDYVMTRPDLDKTKVFLFGRSLGGAVAI
HLASENSHRISAIMVENTFLSIPHMASTLFSFFPMRYLPLWCYKNKFLSY
RKISQCRMPSLFISGLSDQLIPPVMMKQLYELSPSRTKRLAIFPDGTHND
TWQCQGYFTALEQFIKEVIKSHSPEDMTKTSSNVTII
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MEKPWMLWSFIERWLLALVSWSWALCRISLLPLIVTFHLYGGIVLLLLIF
VSIAGILYKFQDVLLYFPEQPSSSRLYVPMPTGIPHENIFIRTKDGVRLN
LILVRYTGDNSPYCPTIIYFHGNAGNIGHRLPNALLMLVNLKVNLVLVDY
RGYGKSEGEASEEGLYLDSEAVLDYVMTRPDLDKTKVFLFGRSLGGAVAI
HLASENSHRISAIMVENTFLSIPHMASTLFSFFPMRYLPLWCYKNKFLSY
RKISQCRMPSLFISGLSDQLIPPVMMKQLYELSPSRTKRLAIFPDGTHND
TWQCQGYFTALEQFIKEVIKSHSPEDMTKTSSNVTII


References
    Title: Quantitative phosphoproteomics of vasopressin-sensitive renal cells: regulation of aquaporin-2 phosphorylation at two sites
    Hoffert JD, Pisitkun T, Wang G, Shen RF, Knepper MA
    Ref: Proc Natl Acad Sci U S A, 103:7159, 2006 : PubMed

            

    Title: Gene and alternative splicing annotation with AIR
    Florea L, Di Francesco V, Miller J, Turner R, Yao A, Harris M, Walenz B, Mobarry C, Merkulov GV and Sutton G <5 more author(s)>
    Ref: Genome Res, 15:54, 2005 : PubMed

            

    Title: Genome sequence of the Brown Norway rat yields insights into mammalian evolution
    Gibbs RA, Weinstock GM, Metzker ML, Muzny DM, Sodergren EJ, Scherer S, Scott G, Steffen D, Worley KC and Collins F <218 more author(s)>
    Ref: Nature, 428:493, 2004 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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