| Title : Polyesterase activity is widespread in the family IV carboxylesterases from bacteria - Ma_2024_J.Hazard.Mater_481_136540 |
| Author(s) : Ma H , Khusnutdinova AN , Lemak S , Chernikova TN , Golyshina OV , Almendral D , Ferrer M , Golyshin PN , Yakunin AF |
| Ref : J Hazard Mater , 481 :136540 , 2024 |
| Abstract : |
| PubMedSearch : Ma_2024_J.Hazard.Mater_481_136540 |
| PubMedID: 39561546 |
| Gene_locus related to this paper: 9zzzz-a0a0g3fj39 , pyrca-PCEST , 9bact-g3cr02 , 9bact-estC55.8n1 , uncxx-a0a2h5ydr5 , 9bact-a0a1s5qke7 , 9bact-estC55.19n1 |
| Title : The Mobility of the Cap Domain Is Essential for the Substrate Promiscuity of a Family IV Esterase from Sorghum Rhizosphere Microbiome - Distaso_2023_Appl.Environ.Microbiol__e0180722 |
| Author(s) : Distaso M , Cea-Rama I , Coscolin C , Chernikova TN , Tran H , Ferrer M , Sanz-Aparicio J , Golyshin PN |
| Ref : Applied Environmental Microbiology , :e0180722 , 2023 |
| Abstract : |
| PubMedSearch : Distaso_2023_Appl.Environ.Microbiol__e0180722 |
| PubMedID: 36602332 |
| Gene_locus related to this paper: 9bact-EH0 |
| Title : Thermophilic Carboxylesterases from Hydrothermal Vents of the Volcanic Island of Ischia Active on Synthetic and Biobased Polymers and Mycotoxins - Distaso_2023_Appl.Environ.Microbiol__e0170422 |
| Author(s) : Distaso MA , Chernikova TN , Bargiela R , Coscolin C , Stogios P , Gonzalez-Alfonso JL , Lemak S , Khusnutdinova AN , Plou FJ , Evdokimova E , Savchenko A , Lunev EA , Yakimov MM , Golyshina OV , Ferrer M , Yakunin AF , Golyshin PN |
| Ref : Applied Environmental Microbiology , :e0170422 , 2023 |
| Abstract : |
| PubMedSearch : Distaso_2023_Appl.Environ.Microbiol__e0170422 |
| PubMedID: 36719236 |
| Gene_locus related to this paper: 9bact-estC55.8n1 , 9bact-IS10 |
| Title : Harnessing extremophilic carboxylesterases for applications in polyester depolymerisation and plastic waste recycling - Williams_2023_Essays.Biochem__ |
| Author(s) : Williams GB , Ma H , Khusnutdinova AN , Yakunin AF , Golyshin PN |
| Ref : Essays Biochem , : , 2023 |
| Abstract : |
| PubMedSearch : Williams_2023_Essays.Biochem__ |
| PubMedID: 37334661 |
| Title : Assigning Functions of Unknown Enzymes by High-Throughput Enzyme Characterization - Molina-Espeja_2023_Methods.Mol.Biol_2555_181 |
| Author(s) : Molina-Espeja P , Fernandez-Lopez L , Golyshin PN , Ferrer M |
| Ref : Methods Mol Biol , 2555 :181 , 2023 |
| Abstract : |
| PubMedSearch : Molina-Espeja_2023_Methods.Mol.Biol_2555_181 |
| PubMedID: 36306087 |
| Title : Structure and evolutionary trace-assisted screening of a residue swapping the substrate ambiguity and chiral specificity in an esterase - Cea-Rama_2021_Comput.Struct.Biotechnol.J_19_2307 |
| Author(s) : Cea-Rama I , Coscolin C , Katsonis P , Bargiela R , Golyshin PN , Lichtarge O , Ferrer M , Sanz-Aparicio J |
| Ref : Comput Struct Biotechnol J , 19 :2307 , 2021 |
| Abstract : |
| PubMedSearch : Cea-Rama_2021_Comput.Struct.Biotechnol.J_19_2307 |
| PubMedID: 33995922 |
| Gene_locus related to this paper: 9zzzz-a0a2k8jn75 |
| Title : Genetically engineered proteins with two active sites for enhanced biocatalysis and synergistic chemo- and biocatalysis - Alonso_2020_Nat.Catal_3_319 |
| Author(s) : Alonso S , Santiago G , Cea-Rama I , Fernandez-Lopez L , Coscolin C , Modregger J , Ressmann A , Martinez-Martinez M , Marrero H , Bargiela R , Pita M , Gonzalez-Alfonso JL , Briand M , Rojo D , Barbas C , Plou FJ , Golyshin PN , Shahgaldian P , Sanz-Aparicio J , Guallar V , Ferrer M |
| Ref : Nature Catalysis , 3 :319 , 2019 |
| Abstract : |
| PubMedSearch : Alonso_2020_Nat.Catal_3_319 |
| PubMedID: |
| Gene_locus related to this paper: 9bact-LAE6 |
| Title : Rational Engineering of Multiple Active Sites in an Ester Hydrolase - Santiago_2018_Biochemistry_57_2245 |
| Author(s) : Santiago G , Martinez-Martinez M , Alonso S , Bargiela R , Coscolin C , Golyshin PN , Guallar V , Ferrer M |
| Ref : Biochemistry , 57 :2245 , 2018 |
| Abstract : |
| PubMedSearch : Santiago_2018_Biochemistry_57_2245 |
| PubMedID: 29600855 |
| Gene_locus related to this paper: 9bact-LAE6 |
| Title : Screening and Characterization of Novel Polyesterases from Environmental Metagenomes with High Hydrolytic Activity against Synthetic Polyesters - Hajighasemi_2018_Environ.Sci.Technol_52_12388 |
| Author(s) : Hajighasemi M , Tchigvintsev A , Nocek B , Flick R , Popovic A , Hai T , Khusnutdinova AN , Brown G , Xu X , Cui H , Anstett J , Chernikova TN , Bruls T , Le Paslier D , Yakimov MM , Joachimiak A , Golyshina OV , Savchenko A , Golyshin PN , Edwards EA , Yakunin AF |
| Ref : Environ Sci Technol , 52 :12388 , 2018 |
| Abstract : |
| PubMedSearch : Hajighasemi_2018_Environ.Sci.Technol_52_12388 |
| PubMedID: 30284819 |
| Gene_locus related to this paper: 9zzzz-a0a0g3fj39 , 9zzzz-a0a0g3fj48 , 9zzzz-A0A0G3FEJ8 , 9bact-a4uz10 |
| Title : Activity screening of environmental metagenomic libraries reveals novel carboxylesterase families - Popovic_2017_Sci.Rep_7_44103 |
| Author(s) : Popovic A , Hai T , Tchigvintsev A , Hajighasemi M , Nocek B , Khusnutdinova AN , Brown G , Glinos J , Flick R , Skarina T , Chernikova TN , Yim V , Bruls T , Paslier DL , Yakimov MM , Joachimiak A , Ferrer M , Golyshina OV , Savchenko A , Golyshin PN , Yakunin AF |
| Ref : Sci Rep , 7 :44103 , 2017 |
| Abstract : |
| PubMedSearch : Popovic_2017_Sci.Rep_7_44103 |
| PubMedID: 28272521 |
| Gene_locus related to this paper: 9zzzz-a0a0g3fj39 , 9zzzz-a0a0g3fj48 , 9zzzz-A0A0G3FEJ8 |
| Title : Biochemical and Structural Insights into Enzymatic Depolymerization of Polylactic Acid and Other Polyesters by Microbial Carboxylesterases - Hajighasemi_2016_Biomacromolecules_17_2027 |
| Author(s) : Hajighasemi M , Nocek BP , Tchigvintsev A , Brown G , Flick R , Xu X , Cui H , Hai T , Joachimiak A , Golyshin PN , Savchenko A , Edwards EA , Yakunin AF |
| Ref : Biomacromolecules , 17 :2027 , 2016 |
| Abstract : |
| PubMedSearch : Hajighasemi_2016_Biomacromolecules_17_2027 |
| PubMedID: 27087107 |
| Gene_locus related to this paper: marav-a1u5n0 , rhopa-q6n9m9 , alcbs-q0vlq1 |
| Title : Isolation and characterization of novel lipases\/esterases from a bovine rumen metagenome - Prive_2015_Appl.Microbiol.Biotechnol_99_5475 |
| Author(s) : Prive F , Newbold CJ , Kaderbhai NN , Girdwood SG , Golyshina OV , Golyshin PN , Scollan ND , Huws SA |
| Ref : Applied Microbiology & Biotechnology , 99 :5475 , 2015 |
| Abstract : |
| PubMedSearch : Prive_2015_Appl.Microbiol.Biotechnol_99_5475 |
| PubMedID: 25575887 |
| Title : The environment shapes microbial enzymes: five cold-active and salt-resistant carboxylesterases from marine metagenomes - Tchigvintsev_2015_Appl.Microbiol.Biotechnol_99_2165 |
| Author(s) : Tchigvintsev A , Tran H , Popovic A , Kovacic F , Brown G , Flick R , Hajighasemi M , Egorova O , Somody JC , Tchigvintsev D , Khusnutdinova A , Chernikova TN , Golyshina OV , Yakimov MM , Savchenko A , Golyshin PN , Jaeger KE , Yakunin AF |
| Ref : Applied Microbiology & Biotechnology , 99 :2165 , 2015 |
| Abstract : |
| PubMedSearch : Tchigvintsev_2015_Appl.Microbiol.Biotechnol_99_2165 |
| PubMedID: 25194841 |
| Gene_locus related to this paper: alcbs-q0vqa3 , 9bact-t1w006 , alcbs-q0vq49 |
| Title : Pressure adaptation is linked to thermal adaptation in salt-saturated marine habitats - Alcaide_2015_Environ.Microbiol_17_332 |
| Author(s) : Alcaide M , Stogios PJ , Lafraya A , Tchigvintsev A , Flick R , Bargiela R , Chernikova TN , Reva ON , Hai T , Leggewie CC , Katzke N , La Cono V , Matesanz R , Jebbar M , Jaeger KE , Yakimov MM , Yakunin AF , Golyshin PN , Golyshina OV , Savchenko A , Ferrer M |
| Ref : Environ Microbiol , 17 :332 , 2015 |
| Abstract : |
| PubMedSearch : Alcaide_2015_Environ.Microbiol_17_332 |
| PubMedID: 25330254 |
| Gene_locus related to this paper: 9alte-MGS-MT1 , 9bact-MGS-M1 , 9bact-MGS-M2 , 9bact-a0a0b5kns5 |
| Title : Diversity of hydrolases from hydrothermal vent sediments of the Levante Bay, Vulcano Island (Aeolian archipelago) identified by activity-based metagenomics and biochemical characterization of new esterases and an arabinopyranosidase - Placido_2015_Appl.Microbiol.Biotechnol_99_10031 |
| Author(s) : Placido A , Hai T , Ferrer M , Chernikova TN , Distaso M , Armstrong D , Yakunin AF , Toshchakov SV , Yakimov MM , Kublanov IV , Golyshina OV , Pesole G , Ceci LR , Golyshin PN |
| Ref : Applied Microbiology & Biotechnology , 99 :10031 , 2015 |
| Abstract : |
| PubMedSearch : Placido_2015_Appl.Microbiol.Biotechnol_99_10031 |
| PubMedID: 26266751 |
| Gene_locus related to this paper: 9bact-a0a0h4tgu6 , 9bact-a0a0k1z4z5 |
| Title : Genome Sequence of Thalassolituus oleivorans MIL-1 (DSM 14913T) - Golyshin_2013_Genome.Announc_1_e0014113 |
| Author(s) : Golyshin PN , Werner J , Chernikova TN , Tran H , Ferrer M , Yakimov MM , Teeling H , Golyshina OV |
| Ref : Genome Announc , 1 :e0014113 , 2013 |
| Abstract : |
| PubMedSearch : Golyshin_2013_Genome.Announc_1_e0014113 |
| PubMedID: 23599290 |
| Gene_locus related to this paper: 9gamm-m5dq85 , 9gamm-m5dt68 , 9gamm-m5dm97 |
| Title : Single residues dictate the co-evolution of dual esterases: MCP hydrolases from the alpha\/beta hydrolase family - Alcaide_2013_Biochem.J_454_157 |
| Author(s) : Alcaide M , Tornes J , Stogios PJ , Xu X , Gertler C , Di Leo R , Bargiela R , Lafraya A , Guazzaroni ME , Lopez-Cortes N , Chernikova TN , Golyshina OV , Nechitaylo TY , Plumeier I , Pieper DH , Yakimov MM , Savchenko A , Golyshin PN , Ferrer M |
| Ref : Biochemical Journal , 454 :157 , 2013 |
| Abstract : |
| PubMedSearch : Alcaide_2013_Biochem.J_454_157 |
| PubMedID: 23750508 |
| Gene_locus related to this paper: 9bact-r9qzf7 , 9gamm-k0c6t6 |
| Title : Genome sequence and functional genomic analysis of the oil-degrading bacterium Oleispira antarctica - Kube_2013_Nat.Commun_4_2156 |
| Author(s) : Kube M , Chernikova TN , Al-Ramahi Y , Beloqui A , Lopez-Cortez N , Guazzaroni ME , Heipieper HJ , Klages S , Kotsyurbenko OR , Langer I , Nechitaylo TY , Lunsdorf H , Fernandez M , Juarez S , Ciordia S , Singer A , Kagan O , Egorova O , Petit PA , Stogios P , Kim Y , Tchigvintsev A , Flick R , Denaro R , Genovese M , Albar JP , Reva ON , Martinez-Gomariz M , Tran H , Ferrer M , Savchenko A , Yakunin AF , Yakimov MM , Golyshina OV , Reinhardt R , Golyshin PN |
| Ref : Nat Commun , 4 :2156 , 2013 |
| Abstract : |
| PubMedSearch : Kube_2013_Nat.Commun_4_2156 |
| PubMedID: 23877221 |
| Gene_locus related to this paper: olean-olei00960 , olean-r4ym14 , olean-r4yv64 , olean-r4ys13 |
| Title : Structure and activity of the cold-active and anion-activated carboxyl esterase OLEI01171 from the oil-degrading marine bacterium Oleispira antarctica - Lemak_2012_Biochem.J_445_193 |
| Author(s) : Lemak S , Tchigvintsev A , Petit P , Flick R , Singer AU , Brown G , Evdokimova E , Egorova O , Gonzalez CF , Chernikova TN , Yakimov MM , Kube M , Reinhardt R , Golyshin PN , Savchenko A , Yakunin AF |
| Ref : Biochemical Journal , 445 :193 , 2012 |
| Abstract : |
| PubMedSearch : Lemak_2012_Biochem.J_445_193 |
| PubMedID: 22519667 |
| Gene_locus related to this paper: olean-d0vwz4 |
| Title : Gene sets for utilization of primary and secondary nutrition supplies in the distal gut of endangered Iberian lynx - Alcaide_2012_PLoS.One_7_e51521 |
| Author(s) : Alcaide M , Messina E , Richter M , Bargiela R , Peplies J , Huws SA , Newbold CJ , Golyshin PN , Simon MA , Lopez G , Yakimov MM , Ferrer M |
| Ref : PLoS ONE , 7 :e51521 , 2012 |
| Abstract : |
| PubMedSearch : Alcaide_2012_PLoS.One_7_e51521 |
| PubMedID: 23251564 |
| Gene_locus related to this paper: 9zzzz-j9g462 , 9zzzz-j9bqr9 , 9zzzz-j9gjr1 , 9zzzz-j9gm47 , 9zzzz-j9ddn5 , 9zzzz-j9g9e5 , 9zzzz-j9fnv6 |
| Title : Microbial beta-glucosidases from cow rumen metagenome enhance the saccharification of lignocellulose in combination with commercial cellulase cocktail - Del Pozo_2012_Biotechnol.Biofuels_5_73 |
| Author(s) : Del Pozo MV , Fernandez-Arrojo L , Gil-Martinez J , Montesinos A , Chernikova TN , Nechitaylo TY , Waliszek A , Tortajada M , Rojas A , Huws SA , Golyshina OV , Newbold CJ , Polaina J , Ferrer M , Golyshin PN |
| Ref : Biotechnol Biofuels , 5 :73 , 2012 |
| Abstract : |
| PubMedSearch : Del Pozo_2012_Biotechnol.Biofuels_5_73 |
| PubMedID: 22998985 |
| Gene_locus related to this paper: 9bact-m4pza5 |
| Title : Inter-conversion of catalytic abilities in a bifunctional carboxyl\/feruloyl-esterase from earthworm gut metagenome - Vieites_2010_Microb.Biotechnol_3_48 |
| Author(s) : Vieites JM , Ghazi A , Beloqui A , Polaina J , Andreu JM , Golyshina OV , Nechitaylo TY , Waliczek A , Yakimov MM , Golyshin PN , Ferrer M |
| Ref : Microb Biotechnol , 3 :48 , 2010 |
| Abstract : |
| PubMedSearch : Vieites_2010_Microb.Biotechnol_3_48 |
| PubMedID: 21255305 |
| Title : Diversity of glycosyl hydrolases from cellulose-depleting communities enriched from casts of two earthworm species - Beloqui_2010_Appl.Environ.Microbiol_76_5934 |
| Author(s) : Beloqui A , Nechitaylo TY , Lopez-Cortes N , Ghazi A , Guazzaroni ME , Polaina J , Strittmatter AW , Reva O , Waliczek A , Yakimov MM , Golyshina OV , Ferrer M , Golyshin PN |
| Ref : Applied Environmental Microbiology , 76 :5934 , 2010 |
| Abstract : |
| PubMedSearch : Beloqui_2010_Appl.Environ.Microbiol_76_5934 |
| PubMedID: 20622123 |
| Gene_locus related to this paper: 9zzzz-d8vn29 |
| Title : Novel hybrid esterase-haloacid dehalogenase enzyme - |
| Author(s) : Beloqui A , Polaina J , Vieites JM , Reyes-Duarte D , Torres R , Golyshina OV , Chernikova TN , Waliczek A , Aharoni A , Yakimov MM , Timmis KN , Golyshin PN , Ferrer M |
| Ref : Chembiochem , 11 :1975 , 2010 |
| PubMedID: 20715265 |
| Title : The 'pH optimum anomaly' of intracellular enzymes of Ferroplasma acidiphilum - Golyshina_2006_Environ.Microbiol_8_416 |
| Author(s) : Golyshina OV , Golyshin PN , Timmis KN , Ferrer M |
| Ref : Environ Microbiol , 8 :416 , 2006 |
| Abstract : |
| PubMedSearch : Golyshina_2006_Environ.Microbiol_8_416 |
| PubMedID: 16478448 |
| Gene_locus related to this paper: 9eury-q2pce5 |
| Title : Natural microbial diversity in superficial sediments of Milazzo Harbor (Sicily) and community successions during microcosm enrichment with various hydrocarbons - Yakimov_2005_Environ.Microbiol_7_1426 |
| Author(s) : Yakimov MM , Denaro R , Genovese M , Cappello S , D'Auria G , Chernikova TN , Timmis KN , Golyshin PN , Giluliano L |
| Ref : Environ Microbiol , 7 :1426 , 2005 |
| Abstract : |
| PubMedSearch : Yakimov_2005_Environ.Microbiol_7_1426 |
| PubMedID: 16104865 |
| Gene_locus related to this paper: 9bact-MilE3 |
| Title : Novel hydrolase diversity retrieved from a metagenome library of bovine rumen microflora - Ferrer_2005_Environ.Microbiol_7_1996 |
| Author(s) : Ferrer M , Golyshina OV , Chernikova TN , Khachane AN , Reyes-Duarte D , Santos VA , Strompl C , Elborough K , Jarvis G , Neef A , Yakimov MM , Timmis KN , Golyshin PN |
| Ref : Environ Microbiol , 7 :1996 , 2005 |
| Abstract : |
| PubMedSearch : Ferrer_2005_Environ.Microbiol_7_1996 |
| PubMedID: 16309396 |
| Gene_locus related to this paper: 9zzzz-q2yi75 , 9zzzz-q2yi81 , 9zzzz-q2yi93 |
| Title : Microbial enzymes mined from the Urania deep-sea hypersaline anoxic basin - Ferrer_2005_Chem.Biol_12_895 |
| Author(s) : Ferrer M , Golyshina OV , Chernikova TN , Khachane AN , Martins dos Santos VA , Yakimov MM , Timmis KN , Golyshin PN |
| Ref : Chemical Biology , 12 :895 , 2005 |
| Abstract : |
| PubMedSearch : Ferrer_2005_Chem.Biol_12_895 |
| PubMedID: 16125101 |
| Gene_locus related to this paper: 9zzzz-q335p2 , 9zzzz-q335p5 |
| Title : Conversion of a carboxylesterase into a triacylglycerol lipase by a random mutation - |
| Author(s) : Reyes-Duarte D , Polaina J , Lopez-Cortes N , Alcalde M , Plou FJ , Elborough K , Ballesteros A , Timmis KN , Golyshin PN , Ferrer M |
| Ref : Angew Chem Int Ed Engl , 44 :7553 , 2005 |
| PubMedID: 16254934 |
| Title : Expression of a temperature-sensitive esterase in a novel chaperone-based Escherichia coli strain - Ferrer_2004_Appl.Environ.Microbiol_70_4499 |
| Author(s) : Ferrer M , Chernikova TN , Timmis KN , Golyshin PN |
| Ref : Applied Environmental Microbiology , 70 :4499 , 2004 |
| Abstract : |
| PubMedSearch : Ferrer_2004_Appl.Environ.Microbiol_70_4499 |
| PubMedID: 15294778 |
| Gene_locus related to this paper: olean-q6a2s8 |
| Title : A putative lichenysin A synthetase operon in B.licheniformis: initial charachterization. - |
| Author(s) : Yakimov MM , Kroeger A , Slepak TN , Giuliano L , Timmis KN , Golyshin PN |
| Ref : Biochimica & Biophysica Acta , 1399 :141 , 1998 |
| PubMedID: 9765590 |
| Gene_locus related to this paper: bacli-LICC , bacli-LICTE |