Ferrer M

References (44)

Title : Enhancing the Hydrolytic Activity of a Lipase towards Larger Triglycerides through Lid Domain Engineering - Fernandez-Lopez_2023_Int.J.Mol.Sci_24_13768
Author(s) : Fernandez-Lopez L , Roda S , Robles-Martin A , Munoz-Tafalla R , Almendral D , Ferrer M , Guallar V
Ref : Int J Mol Sci , 24 : , 2023
Abstract :
PubMedSearch : Fernandez-Lopez_2023_Int.J.Mol.Sci_24_13768
PubMedID: 37762071
Gene_locus related to this paper: 9pseu-a0a1l7F3D7

Title : Transforming an esterase into an enantioselective catecholase through bioconjugation of a versatile metal-chelating inhibitor - Fernandez-Lopez_2023_Chem.Commun.(Camb)__
Author(s) : Fernandez-Lopez L , Cea-Rama I , Alvarez-Malmagro J , Ressmann AK , Gonzalez-Alfonso JL , Coscolin C , Shahgaldian P , Plou FJ , Modregger J , Pita M , Sanz-Aparicio J , Ferrer M
Ref : Chem Commun (Camb) , : , 2023
Abstract :
PubMedSearch : Fernandez-Lopez_2023_Chem.Commun.(Camb)__
PubMedID: 37376994
Gene_locus related to this paper: 9zzzz-a0a2k8jn75

Title : Thermophilic Carboxylesterases from Hydrothermal Vents of the Volcanic Island of Ischia Active on Synthetic and Biobased Polymers and Mycotoxins - Distaso_2023_Appl.Environ.Microbiol__e0170422
Author(s) : Distaso MA , Chernikova TN , Bargiela R , Coscolin C , Stogios P , Gonzalez-Alfonso JL , Lemak S , Khusnutdinova AN , Plou FJ , Evdokimova E , Savchenko A , Lunev EA , Yakimov MM , Golyshina OV , Ferrer M , Yakunin AF , Golyshin PN
Ref : Applied Environmental Microbiology , :e0170422 , 2023
Abstract :
PubMedSearch : Distaso_2023_Appl.Environ.Microbiol__e0170422
PubMedID: 36719236
Gene_locus related to this paper: 9bact-estC55.8n1 , 9bact-IS10

Title : The Mobility of the Cap Domain Is Essential for the Substrate Promiscuity of a Family IV Esterase from Sorghum Rhizosphere Microbiome - Distaso_2023_Appl.Environ.Microbiol__e0180722
Author(s) : Distaso M , Cea-Rama I , Coscolin C , Chernikova TN , Tran H , Ferrer M , Sanz-Aparicio J , Golyshin PN
Ref : Applied Environmental Microbiology , :e0180722 , 2023
Abstract :
PubMedSearch : Distaso_2023_Appl.Environ.Microbiol__e0180722
PubMedID: 36602332
Gene_locus related to this paper: 9bact-EH0

Title : Assigning Functions of Unknown Enzymes by High-Throughput Enzyme Characterization - Molina-Espeja_2023_Methods.Mol.Biol_2555_181
Author(s) : Molina-Espeja P , Fernandez-Lopez L , Golyshin PN , Ferrer M
Ref : Methods Mol Biol , 2555 :181 , 2023
Abstract :
PubMedSearch : Molina-Espeja_2023_Methods.Mol.Biol_2555_181
PubMedID: 36306087

Title : EP-Pred: A Machine Learning Tool for Bioprospecting Promiscuous Ester Hydrolases - Xiang_2022_Biomolecules_12_
Author(s) : Xiang R , Fernandez-Lopez L , Robles-Martin A , Ferrer M , Guallar V
Ref : Biomolecules , 12 : , 2022
Abstract :
PubMedSearch : Xiang_2022_Biomolecules_12_
PubMedID: 36291739

Title : Crystal structure of a family VIII beta-lactamase fold hydrolase reveals the molecular mechanism for its broad substrate scope - Cea-Rama_2022_FEBS.J__
Author(s) : Cea-Rama I , Coscolin C , Gonzalez-Alfonso JL , Raj J , Vasiljevic M , Plou FJ , Ferrer M , Sanz-Aparicio J
Ref : Febs J , : , 2022
Abstract :
PubMedSearch : Cea-Rama_2022_FEBS.J__
PubMedID: 35694902

Title : Metagenomic Mining for Esterases in the Microbial Community of Los Rueldos Acid Mine Drainage Formation - Vidal_2022_Front.Microbiol_13_868839
Author(s) : Vidal P , Martinez-Martinez M , Fernandez-Lopez L , Roda S , Mendez-Garcia C , Golyshina OV , Guallar V , Pelaez AI , Ferrer M
Ref : Front Microbiol , 13 :868839 , 2022
Abstract :
PubMedSearch : Vidal_2022_Front.Microbiol_13_868839
PubMedID: 35663881
Gene_locus related to this paper: 9zzzz-t1a3k4 , 9zzzz-t1ci96 , 9zzzz-t1b379 , 9zzzz-t1be47 , 9zzzz-t1d4I7 , 9actn-KY010298 , 9bact-KY010297

Title : Computationally Driven Rational Design of Substrate Promiscuity on Serine Ester Hydrolases - Roda_2021_ACS.Catal_11_3590
Author(s) : Roda S , Fernandez-Lopez L , Canadas R , Santiago G , Ferrer M , Guallar V
Ref : ACS Catal , 11 :3590 , 2021
Abstract :
PubMedSearch : Roda_2021_ACS.Catal_11_3590
PubMedID:

Title : Crystal structures of a novel family IV esterase in free and substrate-bound form - Hoppner_2021_FEBS.J_288_3570
Author(s) : Hoppner A , Bollinger A , Kobus S , Thies S , Coscolin C , Ferrer M , Jaeger KE , Smits SHJ
Ref : Febs J , 288 :3570 , 2021
Abstract :
PubMedSearch : Hoppner_2021_FEBS.J_288_3570
PubMedID: 33342083
Gene_locus related to this paper: pseth-a0a1m6y2k1

Title : Structure and evolutionary trace-assisted screening of a residue swapping the substrate ambiguity and chiral specificity in an esterase - Cea-Rama_2021_Comput.Struct.Biotechnol.J_19_2307
Author(s) : Cea-Rama I , Coscolin C , Katsonis P , Bargiela R , Golyshin PN , Lichtarge O , Ferrer M , Sanz-Aparicio J
Ref : Comput Struct Biotechnol J , 19 :2307 , 2021
Abstract :
PubMedSearch : Cea-Rama_2021_Comput.Struct.Biotechnol.J_19_2307
PubMedID: 33995922
Gene_locus related to this paper: 9zzzz-a0a2k8jn75

Title : Promiscuous Esterases Counterintuitively Are Less Flexible than Specific Ones - Nutschel_2021_J.Chem.Inf.Model__
Author(s) : Nutschel C , Coscolin C , David B , Mulnaes D , Ferrer M , Jaeger KE , Gohlke H
Ref : J Chem Inf Model , : , 2021
Abstract :
PubMedSearch : Nutschel_2021_J.Chem.Inf.Model__
PubMedID: 33949194

Title : Tuning the Properties of Natural Promiscuous Enzymes by Engineering Their Nano-environment - Giunta_2020_ACS.Nano__
Author(s) : Giunta CI , Cea-Rama I , Alonso S , Briand ML , Bargiela R , Coscolin C , Corvini PF , Ferrer M , Sanz-Aparicio J , Shahgaldian P
Ref : ACS Nano , : , 2020
Abstract :
PubMedSearch : Giunta_2020_ACS.Nano__
PubMedID: 33306346
Gene_locus related to this paper: 9zzzz-a0a2k8jn75

Title : A Novel Polyester Hydrolase From the Marine Bacterium Pseudomonas aestusnigri - Structural and Functional Insights - Bollinger_2020_Front.Microbiol_11_114
Author(s) : Bollinger A , Thies S , Knieps-Grunhagen E , Gertzen C , Kobus S , Hoppner A , Ferrer M , Gohlke H , Smits SHJ , Jaeger KE
Ref : Front Microbiol , 11 :114 , 2020
Abstract :
PubMedSearch : Bollinger_2020_Front.Microbiol_11_114
PubMedID: 32117139
Gene_locus related to this paper: 9psed-peh

Title : Organic-Solvent-Tolerant Carboxylic Ester Hydrolases for Organic Synthesis - Bollinger_2020_Appl.Environ.Microbiol_86_e00106
Author(s) : Bollinger A , Molitor R , Thies S , Koch R , Coscolin C , Ferrer M , Jaeger KE
Ref : Applied Environmental Microbiology , 86 :e00106 , 2020
Abstract :
PubMedSearch : Bollinger_2020_Appl.Environ.Microbiol_86_e00106
PubMedID: 32111588
Gene_locus related to this paper: 9psed-peh , alcbs-q0vt77 , alcbs-q0vtl7 , aneth-d3xb96 , alcbs-q0vl36 , alcbs-q0vq49 , 9psed-CE24 , 9psed-CE23 , 9psed-CE22 , 9psed-CE20 , 9psed-CE18 , 9psed-CE15 , 9psed-CE13 , alcbs-q0vmp2 , alcbs-q0vlp6 , marav-a1u5n0 , alcbs-q0vlk5 , 9psed-a0a1h5udv9

Title : Genetically engineered proteins with two active sites for enhanced biocatalysis and synergistic chemo- and biocatalysis - Alonso_2020_Nat.Catal_3_319
Author(s) : Alonso S , Santiago G , Cea-Rama I , Fernandez-Lopez L , Coscolin C , Modregger J , Ressmann A , Martinez-Martinez M , Marrero H , Bargiela R , Pita M , Gonzalez-Alfonso JL , Briand M , Rojo D , Barbas C , Plou FJ , Golyshin PN , Shahgaldian P , Sanz-Aparicio J , Guallar V , Ferrer M
Ref : Nature Catalysis , 3 :319 , 2019
Abstract :
PubMedSearch : Alonso_2020_Nat.Catal_3_319
PubMedID:
Gene_locus related to this paper: 9bact-LAE6

Title : The Thaumarchaeon N. gargensis carries functional bioABD genes and has a promiscuous E. coli DeltabioH-complementing esterase EstN1 - Chow_2018_Sci.Rep_8_13823
Author(s) : Chow J , Danso D , Ferrer M , Streit WR
Ref : Sci Rep , 8 :13823 , 2018
Abstract :
PubMedSearch : Chow_2018_Sci.Rep_8_13823
PubMedID: 30218044

Title : Functional-Based Screening Methods for Detecting Esterase and Lipase Activity Against Multiple Substrates - Reyes-Duarte_2018_Methods.Mol.Biol_1835_109
Author(s) : Reyes-Duarte D , Coscolin C , Martinez-Martinez M , Ferrer M , Garcia-Arellano H
Ref : Methods Mol Biol , 1835 :109 , 2018
Abstract :
PubMedSearch : Reyes-Duarte_2018_Methods.Mol.Biol_1835_109
PubMedID: 30109647

Title : Rational Engineering of Multiple Active Sites in an Ester Hydrolase - Santiago_2018_Biochemistry_57_2245
Author(s) : Santiago G , Martinez-Martinez M , Alonso S , Bargiela R , Coscolin C , Golyshin PN , Guallar V , Ferrer M
Ref : Biochemistry , 57 :2245 , 2018
Abstract :
PubMedSearch : Santiago_2018_Biochemistry_57_2245
PubMedID: 29600855
Gene_locus related to this paper: 9bact-LAE6

Title : Determinants and prediction of esterase substrate promiscuity patterns - Martinez-Martinez_2018_ACS.Chem.Biol_13_225
Author(s) : Martinez-Martinez M , Coscolin C , Santiago G , Chow J , Stogios PJ , Bargiela R , Gertler C , Navarro-Fernandez J , Bollinger A , Thies S , Mendez-Garcia C , Popovic A , Brown G , Chernikova TN , Garcia-Moyano A , Bjergah GE , Perez-Garcia P , Hai T , Del Pozo MV , Stokke R , Steen IH , Cui H , Xu X , Nocek BP , Alcaide M , Distaso M , Mesa V , Pelaez AI , Sanchez J , Buchholz PCF , Pleiss J , Fernandez-Guerra A , Glockner FO , Golyshina OV , Yakimov MM , Savchenko A , Jaeger KE , Yakunin AF , Streit WR , Golyshin PN , Guallar V , Ferrer M
Ref : ACS Chemical Biology , 13 :225 , 2018
Abstract :
PubMedSearch : Martinez-Martinez_2018_ACS.Chem.Biol_13_225
PubMedID: 29182315
Gene_locus related to this paper: 9zzzz-a0a2k8jn75 , 9zzzz-a0a2k8jt94 , 9zzzz-a0a0g3fj44 , 9zzzz-a0a0g3fh10 , 9zzzz-a0a0g3fh03 , 9bact-a0a1s5qkj8 , 9zzzz-a0a0g3feh5 , 9zzzz-a0a0g3fkz4 , 9zzzz-a0a0g3fh07 , 9zzzz-a0a0g3fh34 , 9zzzz-a0a0g3fh31 , 9bact-KY458167 , alcbs-q0vqa3 , 9bact-a0a1s5qki8 , 9zzzz-a0a0g3feq8 , 9zzzz-a0a0g3feh8 , 9zzzz-a0a0g3fh19 , 9bact-KY203037 , 9bact-a0a1s5ql22 , 9bact-a0a1s5qm34 , 9bact-KY203034 , 9bact-r9qzg0 , 9bact-a0a1s5qly8 , 9zzzz-a0a0g3fkz8 , 9zzzz-a0a0g3feg9 , 9zzzz-KY203033 , 9zzzz-a0a0g3fes4 , 9zzzz-a0a0g3fh42 , 9bact-a0a1s5qlx2 , 9zzzz-KY483651 , 9bact-a0a1s5qmh4 , 9zzzz-KY203032 , 9zzzz-EH87 , 9zzzz-a0a0g3fei1 , 9zzzz-a0a0g3fet2 , 9zzzz-KY483647 , 9zzzz-EH82 , 9zzzz-a0a0g3fe15 , 9bact-KY203031 , 9bact-t1w006 , 9zzzz-a0a0g3fet6 , 9bact-KY458164 , geoth-g8myf3 , 9bact-a0a1s5ql04 , 9gamm-a0a1y0ihk7 , 9bact-a0a1s5qly6 , 9bact-a0a1s5qkg4 , 9bact-a0a1s5qkm4 , 9gamm-s5tv80 , 9gamm-a0a0c4zhg2 , 9zzzz-t1b379 , 9gamm-KY483646 , 9bact-KY458160 , 9zzzz-a0a0g3fj57 , 9gamm-s5t8349 , 9arch-KY203036 , 9bact-KY458168 , 9zzzz-a0a0g3fes0 , 9zzzz-t1be47 , 9bact-KY458159 , 9zzzz-a0a0g3fh39 , 9bact-t1vzd5 , 9prot-EH41 , 9bact-Lip114 , alcbs-q0vt77 , 9bact-a0a1s5qke6 , 9bact-a0a1s5qkf3 , 9prot-SRP030024 , 9gamm-s5t532 , 9bact-a0a1s5qkl2 , 9bact-a0a1s5qkk8 , 9zzzz-KY203030 , 9zzzz-t1d4I7 , 9prot-KY019260 , 9bact-a0a1s5qm38 , 9arch-KY458161 , 9prot-KY010302 , 9zzzz-a0a0g3fl25 , 9actn-KY010298 , 9gamm-s5u059 , 9bact-a0a1s5qmi7 , 9bact-KY010297 , 9bact-KY483642 , 9bact-a0a1s5qkj1 , 9bact-KY010299 , 9bact-KY483648 , alcbs-q0vtl7 , 9bact-a0a1s5qf1 , 9bact-a0a1s5qkg0 , 9bact-a0a0h4tgu6 , 9bact-MilE3 , 9bact-LAE6 , 9alte-MGS-MT1 , 9bact-r9qzf7 , 9gamm-k0c6t6 , alcbs-q0vl36 , alcbs-q0vlq1 , alcbs-q0vq49 , bacsu-pnbae , canar-LipB , canan-lipasA , geost-lipas , marav-a1u5n0 , pseps-i7k8x5 , staep-GEHD , symth-q67mr3 , altma-s5cfn7 , cycsp-k0c2b8 , alcbs-q0vlk5 , 9bact-k7qe48 , 9bact-MGS-M1 , 9bact-MGS-M2 , 9bact-a0a0b5kns5 , 9zzzz-a0a0g3fej4 , 9zzzz-a0a0g3fj60 , 9zzzz-a0a0g3fej0 , 9zzzz-a0a0g3fj64 , 9bact-a0a0b5kc16 , 9zzzz-a0a0g3feg6 , 9zzzz-a0a0g3feu6

Title : Activity screening of environmental metagenomic libraries reveals novel carboxylesterase families - Popovic_2017_Sci.Rep_7_44103
Author(s) : Popovic A , Hai T , Tchigvintsev A , Hajighasemi M , Nocek B , Khusnutdinova AN , Brown G , Glinos J , Flick R , Skarina T , Chernikova TN , Yim V , Bruls T , Paslier DL , Yakimov MM , Joachimiak A , Ferrer M , Golyshina OV , Savchenko A , Golyshin PN , Yakunin AF
Ref : Sci Rep , 7 :44103 , 2017
Abstract :
PubMedSearch : Popovic_2017_Sci.Rep_7_44103
PubMedID: 28272521
Gene_locus related to this paper: 9zzzz-a0a0g3fj39 , 9zzzz-a0a0g3fj48 , 9zzzz-A0A0G3FEJ8

Title : High Throughput Screening of Esterases, Lipases and Phospholipases in Mutant and Metagenomic Libraries: A Review - Pena-Garcia_2016_Comb.Chem.High.Throughput.Screen_19_605
Author(s) : Pena-Garcia C , Martinez-Martinez M , Reyes-Duarte D , Ferrer M
Ref : Comb Chem High Throughput Screen , 19 :605 , 2016
Abstract :
PubMedSearch : Pena-Garcia_2016_Comb.Chem.High.Throughput.Screen_19_605
PubMedID: 26552433

Title : Diversity of hydrolases from hydrothermal vent sediments of the Levante Bay, Vulcano Island (Aeolian archipelago) identified by activity-based metagenomics and biochemical characterization of new esterases and an arabinopyranosidase - Placido_2015_Appl.Microbiol.Biotechnol_99_10031
Author(s) : Placido A , Hai T , Ferrer M , Chernikova TN , Distaso M , Armstrong D , Yakunin AF , Toshchakov SV , Yakimov MM , Kublanov IV , Golyshina OV , Pesole G , Ceci LR , Golyshin PN
Ref : Applied Microbiology & Biotechnology , 99 :10031 , 2015
Abstract :
PubMedSearch : Placido_2015_Appl.Microbiol.Biotechnol_99_10031
PubMedID: 26266751
Gene_locus related to this paper: 9bact-a0a0h4tgu6 , 9bact-a0a0k1z4z5

Title : Pressure adaptation is linked to thermal adaptation in salt-saturated marine habitats - Alcaide_2015_Environ.Microbiol_17_332
Author(s) : Alcaide M , Stogios PJ , Lafraya A , Tchigvintsev A , Flick R , Bargiela R , Chernikova TN , Reva ON , Hai T , Leggewie CC , Katzke N , La Cono V , Matesanz R , Jebbar M , Jaeger KE , Yakimov MM , Yakunin AF , Golyshin PN , Golyshina OV , Savchenko A , Ferrer M
Ref : Environ Microbiol , 17 :332 , 2015
Abstract :
PubMedSearch : Alcaide_2015_Environ.Microbiol_17_332
PubMedID: 25330254
Gene_locus related to this paper: 9alte-MGS-MT1 , 9bact-MGS-M1 , 9bact-MGS-M2 , 9bact-a0a0b5kns5

Title : Biochemical studies on a versatile esterase that is most catalytically active with polyaromatic esters - Martinez-Martinez_2014_Microb.Biotechnol_7_184
Author(s) : Martinez-Martinez M , Lores I , Pena-Garcia C , Bargiela R , Reyes-Duarte D , Guazzaroni ME , Pelaez AI , Sanchez J , Ferrer M
Ref : Microb Biotechnol , : , 2014
Abstract :
PubMedSearch : Martinez-Martinez_2014_Microb.Biotechnol_7_184
PubMedID: 24418210
Gene_locus related to this paper: 9bacl-h6nd87

Title : Microbial stratification in low pH oxic and suboxic macroscopic growths along an acid mine drainage - Mendez-Garcia_2014_ISME.J_8_1259
Author(s) : Mendez-Garcia C , Mesa V , Sprenger RR , Richter M , Diez MS , Solano J , Bargiela R , Golyshina OV , Manteca A , Ramos JL , Gallego JR , Llorente I , Martins dos Santos VA , Jensen ON , Pelaez AI , Sanchez J , Ferrer M
Ref : Isme J , 8 :1259 , 2014
Abstract :
PubMedSearch : Mendez-Garcia_2014_ISME.J_8_1259
PubMedID: 24430486
Gene_locus related to this paper: 9zzzz-t1a3k4 , 9zzzz-t1ci96 , 9zzzz-t0yxy9 , 9zzzz-t1bz84

Title : Microbiota from the distal guts of lean and obese adolescents exhibit partial functional redundancy besides clear differences in community structure - Ferrer_2013_Environ.Microbiol_15_211
Author(s) : Ferrer M , Ruiz A , Lanza F , Haange SB , Oberbach A , Till H , Bargiela R , Campoy C , Segura MT , Richter M , von Bergen M , Seifert J , Suarez A
Ref : Environ Microbiol , 15 :211 , 2013
Abstract :
PubMedSearch : Ferrer_2013_Environ.Microbiol_15_211
PubMedID: 22891823
Gene_locus related to this paper: 9bact-d1ped1 , 9bact-d1pg85 , 9firm-a5z5y4 , 9firm-a5z5y5 , bacun-a7v041 , 9bact-d1p9d7

Title : Biochemical diversity of carboxyl esterases and lipases from lake arreo (Spain): a metagenomic approach - Martinez-Martinez_2013_Appl.Environ.Microbiol_79_3553
Author(s) : Martinez-Martinez M , Alcaide M , Tchigvintsev A , Reva O , Polaina J , Bargiela R , Guazzaroni ME , Chicote A , Canet A , Valero F , Rico Eguizabal E , Guerrero Mdel C , Yakunin AF , Ferrer M
Ref : Applied Environmental Microbiology , 79 :3553 , 2013
Abstract :
PubMedSearch : Martinez-Martinez_2013_Appl.Environ.Microbiol_79_3553
PubMedID: 23542620
Gene_locus related to this paper: 9bact-LAE6

Title : Genome Sequence of Thalassolituus oleivorans MIL-1 (DSM 14913T) - Golyshin_2013_Genome.Announc_1_e0014113
Author(s) : Golyshin PN , Werner J , Chernikova TN , Tran H , Ferrer M , Yakimov MM , Teeling H , Golyshina OV
Ref : Genome Announc , 1 :e0014113 , 2013
Abstract :
PubMedSearch : Golyshin_2013_Genome.Announc_1_e0014113
PubMedID: 23599290
Gene_locus related to this paper: 9gamm-m5dq85 , 9gamm-m5dt68 , 9gamm-m5dm97

Title : Single residues dictate the co-evolution of dual esterases: MCP hydrolases from the alpha\/beta hydrolase family - Alcaide_2013_Biochem.J_454_157
Author(s) : Alcaide M , Tornes J , Stogios PJ , Xu X , Gertler C , Di Leo R , Bargiela R , Lafraya A , Guazzaroni ME , Lopez-Cortes N , Chernikova TN , Golyshina OV , Nechitaylo TY , Plumeier I , Pieper DH , Yakimov MM , Savchenko A , Golyshin PN , Ferrer M
Ref : Biochemical Journal , 454 :157 , 2013
Abstract :
PubMedSearch : Alcaide_2013_Biochem.J_454_157
PubMedID: 23750508
Gene_locus related to this paper: 9bact-r9qzf7 , 9gamm-k0c6t6

Title : Genome sequence and functional genomic analysis of the oil-degrading bacterium Oleispira antarctica - Kube_2013_Nat.Commun_4_2156
Author(s) : Kube M , Chernikova TN , Al-Ramahi Y , Beloqui A , Lopez-Cortez N , Guazzaroni ME , Heipieper HJ , Klages S , Kotsyurbenko OR , Langer I , Nechitaylo TY , Lunsdorf H , Fernandez M , Juarez S , Ciordia S , Singer A , Kagan O , Egorova O , Petit PA , Stogios P , Kim Y , Tchigvintsev A , Flick R , Denaro R , Genovese M , Albar JP , Reva ON , Martinez-Gomariz M , Tran H , Ferrer M , Savchenko A , Yakunin AF , Yakimov MM , Golyshina OV , Reinhardt R , Golyshin PN
Ref : Nat Commun , 4 :2156 , 2013
Abstract :
PubMedSearch : Kube_2013_Nat.Commun_4_2156
PubMedID: 23877221
Gene_locus related to this paper: olean-olei00960 , olean-r4ym14 , olean-r4yv64 , olean-r4ys13

Title : Microbial beta-glucosidases from cow rumen metagenome enhance the saccharification of lignocellulose in combination with commercial cellulase cocktail - Del Pozo_2012_Biotechnol.Biofuels_5_73
Author(s) : Del Pozo MV , Fernandez-Arrojo L , Gil-Martinez J , Montesinos A , Chernikova TN , Nechitaylo TY , Waliszek A , Tortajada M , Rojas A , Huws SA , Golyshina OV , Newbold CJ , Polaina J , Ferrer M , Golyshin PN
Ref : Biotechnol Biofuels , 5 :73 , 2012
Abstract :
PubMedSearch : Del Pozo_2012_Biotechnol.Biofuels_5_73
PubMedID: 22998985
Gene_locus related to this paper: 9bact-m4pza5

Title : Functional-based screening methods for lipases, esterases, and phospholipases in metagenomic libraries - Reyes-Duarte_2012_Methods.Mol.Biol_861_101
Author(s) : Reyes-Duarte D , Ferrer M , Garcia-Arellano H
Ref : Methods Mol Biol , 861 :101 , 2012
Abstract :
PubMedSearch : Reyes-Duarte_2012_Methods.Mol.Biol_861_101
PubMedID: 22426714

Title : Gene sets for utilization of primary and secondary nutrition supplies in the distal gut of endangered Iberian lynx - Alcaide_2012_PLoS.One_7_e51521
Author(s) : Alcaide M , Messina E , Richter M , Bargiela R , Peplies J , Huws SA , Newbold CJ , Golyshin PN , Simon MA , Lopez G , Yakimov MM , Ferrer M
Ref : PLoS ONE , 7 :e51521 , 2012
Abstract :
PubMedSearch : Alcaide_2012_PLoS.One_7_e51521
PubMedID: 23251564
Gene_locus related to this paper: 9zzzz-j9g462 , 9zzzz-j9bqr9 , 9zzzz-j9gjr1 , 9zzzz-j9gm47 , 9zzzz-j9ddn5 , 9zzzz-j9g9e5 , 9zzzz-j9fnv6

Title : Taxonomic and functional metagenomic profiling of the microbial community in the anoxic sediment of a sub-saline shallow lake (Laguna de Carrizo, Central Spain) - Ferrer_2011_Microb.Ecol_62_824
Author(s) : Ferrer M , Guazzaroni ME , Richter M , Garcia-Salamanca A , Yarza P , Suarez-Suarez A , Solano J , Alcaide M , van Dillewijn P , Molina-Henares MA , Lopez-Cortes N , Al-Ramahi Y , Guerrero C , Acosta A , de Eugenio LI , Martinez V , Marques S , Rojo F , Santero E , Genilloud O , Perez-Perez J , Rossello-Mora R , Ramos JL
Ref : Microb Ecol , 62 :824 , 2011
Abstract :
PubMedSearch : Ferrer_2011_Microb.Ecol_62_824
PubMedID: 21735153
Gene_locus related to this paper: 9zzzz-d9pjn2

Title : Diversity of glycosyl hydrolases from cellulose-depleting communities enriched from casts of two earthworm species - Beloqui_2010_Appl.Environ.Microbiol_76_5934
Author(s) : Beloqui A , Nechitaylo TY , Lopez-Cortes N , Ghazi A , Guazzaroni ME , Polaina J , Strittmatter AW , Reva O , Waliczek A , Yakimov MM , Golyshina OV , Ferrer M , Golyshin PN
Ref : Applied Environmental Microbiology , 76 :5934 , 2010
Abstract :
PubMedSearch : Beloqui_2010_Appl.Environ.Microbiol_76_5934
PubMedID: 20622123
Gene_locus related to this paper: 9zzzz-d8vn29

Title : Inter-conversion of catalytic abilities in a bifunctional carboxyl\/feruloyl-esterase from earthworm gut metagenome - Vieites_2010_Microb.Biotechnol_3_48
Author(s) : Vieites JM , Ghazi A , Beloqui A , Polaina J , Andreu JM , Golyshina OV , Nechitaylo TY , Waliczek A , Yakimov MM , Golyshin PN , Ferrer M
Ref : Microb Biotechnol , 3 :48 , 2010
Abstract :
PubMedSearch : Vieites_2010_Microb.Biotechnol_3_48
PubMedID: 21255305

Title : Novel hybrid esterase-haloacid dehalogenase enzyme -
Author(s) : Beloqui A , Polaina J , Vieites JM , Reyes-Duarte D , Torres R , Golyshina OV , Chernikova TN , Waliczek A , Aharoni A , Yakimov MM , Timmis KN , Golyshin PN , Ferrer M
Ref : Chembiochem , 11 :1975 , 2010
PubMedID: 20715265

Title : Genome sequence of the ubiquitous hydrocarbon-degrading marine bacterium Alcanivorax borkumensis - Schneiker_2006_Nat.Biotechnol_24_997
Author(s) : Schneiker S , Martins dos Santos VA , Bartels D , Bekel T , Brecht M , Buhrmester J , Chernikova TN , Denaro R , Ferrer M , Gertler C , Goesmann A , Golyshina OV , Kaminski F , Khachane AN , Lang S , Linke B , McHardy AC , Meyer F , Nechitaylo T , Puhler A , Regenhardt D , Rupp O , Sabirova JS , Selbitschka W , Yakimov MM , Timmis KN , Vorholter FJ , Weidner S , Kaiser O , Golyshin PN
Ref : Nat Biotechnol , 24 :997 , 2006
Abstract :
PubMedSearch : Schneiker_2006_Nat.Biotechnol_24_997
PubMedID: 16878126
Gene_locus related to this paper: alcbo-Q9F9H0 , alcbs-q0vl04 , alcbs-q0vl36 , alcbs-q0vl92 , alcbs-q0vlp5 , alcbs-q0vlq1 , alcbs-q0vlt9 , alcbs-q0vm92 , alcbs-q0vmd2 , alcbs-q0vmd6 , alcbs-q0vmn9 , alcbs-q0vnu3 , alcbs-q0vp43 , alcbs-q0vpa9 , alcbs-q0vpc7 , alcbs-q0vpg7 , alcbs-q0vpn2 , alcbs-q0vps0 , alcbs-q0vq49 , alcbs-q0vsg4 , alcbs-q0vth9 , marav-a1u5n0 , alcbs-q0vp59 , alcbs-q0vlk5

Title : The 'pH optimum anomaly' of intracellular enzymes of Ferroplasma acidiphilum - Golyshina_2006_Environ.Microbiol_8_416
Author(s) : Golyshina OV , Golyshin PN , Timmis KN , Ferrer M
Ref : Environ Microbiol , 8 :416 , 2006
Abstract :
PubMedSearch : Golyshina_2006_Environ.Microbiol_8_416
PubMedID: 16478448
Gene_locus related to this paper: 9eury-q2pce5

Title : Novel hydrolase diversity retrieved from a metagenome library of bovine rumen microflora - Ferrer_2005_Environ.Microbiol_7_1996
Author(s) : Ferrer M , Golyshina OV , Chernikova TN , Khachane AN , Reyes-Duarte D , Santos VA , Strompl C , Elborough K , Jarvis G , Neef A , Yakimov MM , Timmis KN , Golyshin PN
Ref : Environ Microbiol , 7 :1996 , 2005
Abstract :
PubMedSearch : Ferrer_2005_Environ.Microbiol_7_1996
PubMedID: 16309396
Gene_locus related to this paper: 9zzzz-q2yi75 , 9zzzz-q2yi81 , 9zzzz-q2yi93

Title : Microbial enzymes mined from the Urania deep-sea hypersaline anoxic basin - Ferrer_2005_Chem.Biol_12_895
Author(s) : Ferrer M , Golyshina OV , Chernikova TN , Khachane AN , Martins dos Santos VA , Yakimov MM , Timmis KN , Golyshin PN
Ref : Chemical Biology , 12 :895 , 2005
Abstract :
PubMedSearch : Ferrer_2005_Chem.Biol_12_895
PubMedID: 16125101
Gene_locus related to this paper: 9zzzz-q335p2 , 9zzzz-q335p5

Title : Conversion of a carboxylesterase into a triacylglycerol lipase by a random mutation -
Author(s) : Reyes-Duarte D , Polaina J , Lopez-Cortes N , Alcalde M , Plou FJ , Elborough K , Ballesteros A , Timmis KN , Golyshin PN , Ferrer M
Ref : Angew Chem Int Ed Engl , 44 :7553 , 2005
PubMedID: 16254934

Title : Expression of a temperature-sensitive esterase in a novel chaperone-based Escherichia coli strain - Ferrer_2004_Appl.Environ.Microbiol_70_4499
Author(s) : Ferrer M , Chernikova TN , Timmis KN , Golyshin PN
Ref : Applied Environmental Microbiology , 70 :4499 , 2004
Abstract :
PubMedSearch : Ferrer_2004_Appl.Environ.Microbiol_70_4499
PubMedID: 15294778
Gene_locus related to this paper: olean-q6a2s8