| Title : New dienelactone hydrolase from microalgae bacterial community-Antibiofilm activity against fish pathogens and potential applications for aquaculture - Bergmann_2024_Sci.Rep_14_377 |
| Author(s) : Bergmann L , Balzer Le S , Hageskal G , Preuss L , Han Y , Astafyeva Y , Loevenich S , Emmann S , Perez-Garcia P , Indenbirken D , Katzowitsch E , Thummler F , Alawi M , Wentzel A , Streit WR , Krohn I |
| Ref : Sci Rep , 14 :377 , 2024 |
| Abstract : |
| PubMedSearch : Bergmann_2024_Sci.Rep_14_377 |
| PubMedID: 38172513 |
| Gene_locus related to this paper: 9sphn-ErcDlh3 |
| Title : Andean soil-derived lignocellulolytic bacterial consortium as a source of novel taxa and putative plastic-active enzymes - Diaz-Garcia_2023_Syst.Appl.Microbiol_47_126485 |
| Author(s) : Diaz-Garcia L , Chuvochina M , Feuerriegel G , Bunk B , Sproer C , Streit WR , Rodriguez RL , Overmann J , Jimenez DJ |
| Ref : Syst Appl Microbiol , 47 :126485 , 2023 |
| Abstract : |
| PubMedSearch : Diaz-Garcia_2023_Syst.Appl.Microbiol_47_126485 |
| PubMedID: 38211536 |
| Title : An archaeal lid-containing feruloyl esterase degrades polyethylene terephthalate - Perez-Garcia_2023_Commun.Chem_6_193 |
| Author(s) : Perez-Garcia P , Chow J , Costanzi E , Gurschke M , Dittrich J , Dierkes RF , Molitor R , Applegate V , Feuerriegel G , Tete P , Danso D , Thies S , Schumacher J , Pfleger C , Jaeger KE , Gohlke H , Smits SHJ , Schmitz RA , Streit WR |
| Ref : Commun Chem , 6 :193 , 2023 |
| Abstract : |
| PubMedSearch : Perez-Garcia_2023_Commun.Chem_6_193 |
| PubMedID: 37697032 |
| Gene_locus related to this paper: 9arch-PETcan211 , 9cren-PETcan204 , 9arch-PET46 |
| Title : Metagenomic Screening of a Novel PET Esterase via In Vitro Expression System - Han_2023_Methods.Mol.Biol_2555_167 |
| Author(s) : Han Y , Dierkes RF , Streit WR |
| Ref : Methods Mol Biol , 2555 :167 , 2023 |
| Abstract : |
| PubMedSearch : Han_2023_Methods.Mol.Biol_2555_167 |
| PubMedID: 36306086 |
| Title : The metagenome-derived esterase PET40 is highly promiscuous and hydrolyses polyethylene terephthalate (PET) - Zhang_2023_Febs.j__ |
| Author(s) : Zhang H , Dierkes RF , Perez-Garcia P , Costanzi E , Dittrich J , Cea PA , Gurschke M , Applegate V , Partus K , Schmeisser C , Pfleger C , Gohlke H , Smits SHJ , Chow J , Streit WR |
| Ref : Febs J , : , 2023 |
| Abstract : |
| PubMedSearch : Zhang_2023_Febs.j__ |
| PubMedID: 37549040 |
| Gene_locus related to this paper: 9pseu-PET40 |
| Title : The PET-Degrading Potential of Global Metagenomes: From In Silico Mining to Active Enzymes - Chow_2023_Methods.Mol.Biol_2555_139 |
| Author(s) : Chow J , Perez-Garcia P , Dierkes RF , Zhang H , Streit WR |
| Ref : Methods Mol Biol , 2555 :139 , 2023 |
| Abstract : |
| PubMedSearch : Chow_2023_Methods.Mol.Biol_2555_139 |
| PubMedID: 36306084 |
| Title : An Ultra-Sensitive Comamonas thiooxidans Biosensor for the Rapid Detection of Enzymatic Polyethylene Terephthalate (PET) Degradation - Dierkes_2022_Appl.Environ.Microbiol__e0160322 |
| Author(s) : Dierkes RF , Wypych A , Perez-Garcia P , Danso D , Chow J , Streit WR |
| Ref : Applied Environmental Microbiology , :e0160322 , 2022 |
| Abstract : |
| PubMedSearch : Dierkes_2022_Appl.Environ.Microbiol__e0160322 |
| PubMedID: 36507653 |
| Title : Plastics degradation by hydrolytic enzymes: The plastics-active enzymes database-PAZy - Buchholz_2022_Proteins_90_1443 |
| Author(s) : Buchholz PCF , Feuerriegel G , Zhang H , Perez-Garcia P , Nover LL , Chow J , Streit WR , Pleiss J |
| Ref : Proteins , 90 :1443 , 2022 |
| Abstract : |
| PubMedSearch : Buchholz_2022_Proteins_90_1443 |
| PubMedID: 35175626 |
| Title : Investigation of the halophilic PET hydrolase PET6 from Vibrio gazogenes - Weigert_2022_Protein.Sci__e4500 |
| Author(s) : Weigert S , Perez-Garcia P , Gisdon FJ , Gagsteiger A , Schweinshaut K , Ullmann GM , Chow J , Streit WR , Hcker B |
| Ref : Protein Science , :e4500 , 2022 |
| Abstract : |
| PubMedSearch : Weigert_2022_Protein.Sci__e4500 |
| PubMedID: 36336469 |
| Gene_locus related to this paper: vibga-a0a1m5fok3 |
| Title : A phospholipase B from Pseudomonas aeruginosa with activity towards endogenous phospholipids affects biofilm assembly - Weiler_2022_Biochim.Biophys.Acta.Mol.Cell.Biol.Lipids_1867_159101 |
| Author(s) : Weiler AJ , Spitz O , Gudzuhn M , Schott-Verdugo SN , Kamel M , Thiele B , Streit WR , Kedrov A , Schmitt L , Gohlk H , Kovacic F , Gohlke H |
| Ref : Biochimica & Biophysica Acta Molecular & Cellular Biology Lipids , 1867 :159101 , 2022 |
| Abstract : |
| PubMedSearch : Weiler_2022_Biochim.Biophys.Acta.Mol.Cell.Biol.Lipids_1867_159101 |
| PubMedID: 35063652 |
| Gene_locus related to this paper: pseae-PA2927 |
| Title : Plastics degradation by hydrolytic enzymes: the Plastics-Active Enzymes Database - PAZy - Buchholz_2021_Authorea__ |
| Author(s) : Buchholz PCF , Zhang H , Perez-Garcia P , Nover LL , Chow J , Streit WR , Pleiss J |
| Ref : Authorea , : , 2021 |
| Abstract : |
| PubMedSearch : Buchholz_2021_Authorea__ |
| PubMedID: |
| Title : Exploring the global metagenome for plastic-degrading enzymes - Perez-Garcia_2021_Methods.Enzymol_648_137 |
| Author(s) : Perez-Garcia P , Danso D , Zhang H , Chow J , Streit WR |
| Ref : Methods Enzymol , 648 :137 , 2021 |
| Abstract : |
| PubMedSearch : Perez-Garcia_2021_Methods.Enzymol_648_137 |
| PubMedID: 33579401 |
| Title : The abundance of mRNA transcripts of bacteroidetal polyethylene terephthalate (PET) esterase genes may indicate a role in marine plastic degradation - Zhang_2021_ResearchSquare__ |
| Author(s) : Zhang H , Dierkes R , Perez-Garcia P , Weigert S , Sternagel S , Hallam S , Schott T , Juergens K , Vollstedt C , Chibani C , Danso D , Buchholz PCF , Pleiss J , Almeida A , Hocker B , Schmitz R , Chow J , Streit WR |
| Ref : ResearchSquare , : , 2021 |
| Abstract : |
| PubMedSearch : Zhang_2021_ResearchSquare__ |
| PubMedID: |
| Gene_locus related to this paper: flutr-f2ie04 , 9flao-a0a0c1f4u8 , 9flao-kjj39608 , 9flao-a0a1m6f5v0 , 9flao-a0a330mq60 |
| Title : The Bacteroidetes Aequorivita sp. and Kaistella jeonii Produce Promiscuous Esterases With PET-Hydrolyzing Activity - Zhang_2022_Front.Microbiol_12_803896 |
| Author(s) : Zhang H , Perez-Garcia P , Dierkes RF , Applegate V , Schumacher J , Chibani CM , Sternagel S , Preuss L , Weigert S , Schmeisser C , Danso D , Pleiss J , Almeida A , Hocker B , Hallam SJ , Schmitz RA , Smits SHJ , Chow J , Streit WR |
| Ref : Front Microbiol , 12 :803896 , 2021 |
| Abstract : |
| PubMedSearch : Zhang_2022_Front.Microbiol_12_803896 |
| PubMedID: 35069509 |
| Gene_locus related to this paper: flutr-f2ie04 , 9flao-a0a0c1f4u8 , 9flao-kjj39608 , 9flao-a0a330mq60 |
| Title : Plastics: Environmental and Biotechnological Perspectives on Microbial Degradation - Danso_2019_Appl.Environ.Microbiol_85_e01095 |
| Author(s) : Danso D , Chow J , Streit WR |
| Ref : Applied Environmental Microbiology , 85 : , 2019 |
| Abstract : |
| PubMedSearch : Danso_2019_Appl.Environ.Microbiol_85_e01095 |
| PubMedID: 31324632 |
| Title : The Thaumarchaeon N. gargensis carries functional bioABD genes and has a promiscuous E. coli DeltabioH-complementing esterase EstN1 - Chow_2018_Sci.Rep_8_13823 |
| Author(s) : Chow J , Danso D , Ferrer M , Streit WR |
| Ref : Sci Rep , 8 :13823 , 2018 |
| Abstract : |
| PubMedSearch : Chow_2018_Sci.Rep_8_13823 |
| PubMedID: 30218044 |
| Title : New insights into the function and global distribution of polyethylene terephthalate (PET) degrading bacteria and enzymes in marine and terrestrial metagenomes - Danso_2018_Appl.Environ.Microbiol_84_e2773 |
| Author(s) : Danso D , Schmeisser C , Chow J , Zimmermann W , Wei R , Leggewie C , Li X , Hazen T , Streit WR |
| Ref : Applied Environmental Microbiology , 84 :e2773 , 2018 |
| Abstract : |
| PubMedSearch : Danso_2018_Appl.Environ.Microbiol_84_e2773 |
| PubMedID: 29427431 |
| Gene_locus related to this paper: 9burk-PET10 , 9burk-PET11 , 9gamm-a0a0d4l7e6 , 9alte-n6vy44 , 9zzzz-a0a0f9x315 , deiml-e8u721 , olean-r4ykl9 , vibga-a0a1z2siq1 , 9burk-a0a0g3bi90 , 9bact-c3ryl0 , 9actn-h6wx58 , idesa-peth , 9bact-g9by57 , acide-PBSA , morsp-lip1 |
| Title : Molecular Keys to the Janthinobacterium and Duganella spp. Interaction with the Plant Pathogen Fusarium graminearum - Haack_2016_Front.Microbiol_7_1668 |
| Author(s) : Haack FS , Poehlein A , Kroger C , Voigt CA , Piepenbring M , Bode HB , Daniel R , Schafer W , Streit WR |
| Ref : Front Microbiol , 7 :1668 , 2016 |
| Abstract : |
| PubMedSearch : Haack_2016_Front.Microbiol_7_1668 |
| PubMedID: 27833590 |
| Gene_locus related to this paper: 9burk-a0a1e7w6l2 , 9burk-a0a1e7wlu5 |
| Title : A novel thermoalkalostable esterase from Acidicaldus sp. strain USBA-GBX-499 with enantioselectivity isolated from an acidic hot springs of Colombian Andes - Lopez_2014_Appl.Microbiol.Biotechnol_98_8603 |
| Author(s) : Lopez G , Chow J , Bongen P , Lauinger B , Pietruszka J , Streit WR , Baena S |
| Ref : Applied Microbiology & Biotechnology , 98 :8603 , 2014 |
| Abstract : |
| PubMedSearch : Lopez_2014_Appl.Microbiol.Biotechnol_98_8603 |
| PubMedID: 24818691 |
| Gene_locus related to this paper: 9prot-a0a068lg40 |
| Title : Cloning, expression, purification and preliminary X-ray analysis of EstN2, a novel archaeal alpha\/beta-hydrolase from Candidatus Nitrososphaera gargensis - Kaljunen_2014_Acta.Crystallogr.F.Struct.Biol.Commun_70_1394 |
| Author(s) : Kaljunen H , Chow J , Streit WR , Mueller-Dieckmann J |
| Ref : Acta Crystallographica F Struct Biol Commun , 70 :1394 , 2014 |
| Abstract : |
| PubMedSearch : Kaljunen_2014_Acta.Crystallogr.F.Struct.Biol.Commun_70_1394 |
| PubMedID: 25286947 |
| Gene_locus related to this paper: nitgg-k0im51 |
| Title : Complete Genome Sequence of Geobacillus sp. Strain GHH01, a Thermophilic Lipase-Secreting Bacterium - Wiegand_2013_Genome.Announc_1_e0009213 |
| Author(s) : Wiegand S , Rabausch U , Chow J , Daniel R , Streit WR , Liesegang H |
| Ref : Genome Announc , 1 :e0009213 , 2013 |
| Abstract : |
| PubMedSearch : Wiegand_2013_Genome.Announc_1_e0009213 |
| PubMedID: 23618712 |
| Gene_locus related to this paper: geoka-q5l3h0 , geosc-d7d055 , geotn-a4isp0 , geos2-a0a0e0tby6 |
| Title : The Janthinobacterium sp. HH01 genome encodes a homologue of the V. cholerae CqsA and L. pneumophila LqsA autoinducer synthases - Hornung_2013_PLoS.One_8_e55045 |
| Author(s) : Hornung C , Poehlein A , Haack FS , Schmidt M , Dierking K , Pohlen A , Schulenburg H , Blokesch M , Plener L , Jung K , Bonge A , Krohn-Molt I , Utpatel C , Timmermann G , Spieck E , Pommerening-Roser A , Bode E , Bode HB , Daniel R , Schmeisser C , Streit WR |
| Ref : PLoS ONE , 8 :e55045 , 2013 |
| Abstract : |
| PubMedSearch : Hornung_2013_PLoS.One_8_e55045 |
| PubMedID: 23405110 |
| Gene_locus related to this paper: 9burk-l9pl81 , 9burk-l9pql3 , 9burk-l9pc92 , 9burk-l9pf07 , 9burk-l9pgi7 , 9burk-l9p8t0 , 9burk-l9pl28 |
| Title : Complete genome sequence of the broad-host-range strain Sinorhizobium fredii USDA257 - Schuldes_2012_J.Bacteriol_194_4483 |
| Author(s) : Schuldes J , Rodriguez Orbegoso M , Schmeisser C , Krishnan HB , Daniel R , Streit WR |
| Ref : Journal of Bacteriology , 194 :4483 , 2012 |
| Abstract : |
| PubMedSearch : Schuldes_2012_J.Bacteriol_194_4483 |
| PubMedID: 22843606 |
| Gene_locus related to this paper: rhifr-i3x2k3 , rhifr-i3x2s5 , rhifr-i3xe25 |
| Title : The genome of the ammonia-oxidizing Candidatus Nitrososphaera gargensis: insights into metabolic versatility and environmental adaptations - Spang_2012_Environ.Microbiol_14_3122 |
| Author(s) : Spang A , Poehlein A , Offre P , Zumbragel S , Haider S , Rychlik N , Nowka B , Schmeisser C , Lebedeva EV , Rattei T , Bohm C , Schmid M , Galushko A , Hatzenpichler R , Weinmaier T , Daniel R , Schleper C , Spieck E , Streit WR , Wagner M |
| Ref : Environ Microbiol , 14 :3122 , 2012 |
| Abstract : |
| PubMedSearch : Spang_2012_Environ.Microbiol_14_3122 |
| PubMedID: 23057602 |
| Gene_locus related to this paper: nitgg-k0im51 |
| Title : The metagenome-derived enzymes LipS and LipT increase the diversity of known lipases - Chow_2012_PLoS.One_7_e47665 |
| Author(s) : Chow J , Kovacic F , Dall Antonia Y , Krauss U , Fersini F , Schmeisser C , Lauinger B , Bongen P , Pietruszka J , Schmidt M , Menyes I , Bornscheuer UT , Eckstein M , Thum O , Liese A , Mueller-Dieckmann J , Jaeger KE , Streit WR |
| Ref : PLoS ONE , 7 :e47665 , 2012 |
| Abstract : |
| PubMedSearch : Chow_2012_PLoS.One_7_e47665 |
| PubMedID: 23112831 |
| Gene_locus related to this paper: symth-q67mr3 , 9bact-k7qe48 |
| Title : Cloning, expression, purification and preliminary X-ray analysis of a putative metagenome-derived lipase - Fersini_2012_Acta.Crystallogr.Sect.F.Struct.Biol.Cryst.Commun_68_923 |
| Author(s) : Fersini F , Dall'Antonia Y , Chow J , Streit WR , Mueller-Dieckmann J |
| Ref : Acta Crystallographica Sect F Struct Biol Cryst Commun , 68 :923 , 2012 |
| Abstract : |
| PubMedSearch : Fersini_2012_Acta.Crystallogr.Sect.F.Struct.Biol.Cryst.Commun_68_923 |
| PubMedID: 22869123 |
| Gene_locus related to this paper: symth-q67mr3 |
| Title : Harvesting of novel polyhydroxyalkanaote (PHA) synthase encoding genes from a soil metagenome library using phenotypic screening - Schallmey_2011_FEMS.Microbiol.Lett_321_150 |
| Author(s) : Schallmey M , Ly A , Wang C , Meglei G , Voget S , Streit WR , Driscoll BT , Charles TC |
| Ref : FEMS Microbiology Letters , 321 :150 , 2011 |
| Abstract : |
| PubMedSearch : Schallmey_2011_FEMS.Microbiol.Lett_321_150 |
| PubMedID: 21631577 |
| Gene_locus related to this paper: 9bact-a3rgw9 |
| Title : Enantioselective kinetic resolution of phenylalkyl carboxylic acids using metagenome-derived esterases - Fernandez-Alvaro_2010_Microb.Biotechnol_3_59 |
| Author(s) : Fernandez-Alvaro E , Kourist R , Winter J , Bottcher D , Liebeton K , Naumer C , Eck J , Leggewie C , Jaeger KE , Streit WR , Bornscheuer UT |
| Ref : Microb Biotechnol , 3 :59 , 2010 |
| Abstract : |
| PubMedSearch : Fernandez-Alvaro_2010_Microb.Biotechnol_3_59 |
| PubMedID: 21255306 |
| Gene_locus related to this paper: 9bact-Est8.6Y9K |
| Title : Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems - Schmeisser_2009_Appl.Environ.Microbiol_75_4035 |
| Author(s) : Schmeisser C , Liesegang H , Krysciak D , Bakkou N , Le Quere A , Wollherr A , Heinemeyer I , Morgenstern B , Pommerening-Roser A , Flores M , Palacios R , Brenner S , Gottschalk G , Schmitz RA , Broughton WJ , Perret X , Strittmatter AW , Streit WR |
| Ref : Applied Environmental Microbiology , 75 :4035 , 2009 |
| Abstract : |
| PubMedSearch : Schmeisser_2009_Appl.Environ.Microbiol_75_4035 |
| PubMedID: 19376903 |
| Gene_locus related to this paper: rhime-R01391 , rhime-R02260 , rhime-R02478 , rhisn-c3kku8 , rhisn-c3kl46 , rhisn-c3kly5 , rhisn-c3klz9 , rhisn-c3kmf4 , rhisn-c3kmp5 , rhisn-c3knq1 , rhisn-c3krv5 , rhisn-c3mdb6 , rhisn-c3mee2 , rhisn-c3meq6 , rhisn-c3mev4 , rhisn-c3mgd2 , rhisn-c3mil7 , rhisn-c3miq5 , rhisn-q6w1e1 , sinmw-a6ugj8 , rhisn-c3km61 , rhisn-c3m991 , sinfn-c3m9f4 , sinfn-y4kf |
| Title : Isolation and biochemical characterization of two novel metagenome-derived esterases - Elend_2006_Appl.Environ.Microbiol_72_3637 |
| Author(s) : Elend C , Schmeisser C , Leggewie C , Babiak P , Carballeira JD , Steele HL , Reymond JL , Jaeger KE , Streit WR |
| Ref : Applied Environmental Microbiology , 72 :3637 , 2006 |
| Abstract : |
| PubMedSearch : Elend_2006_Appl.Environ.Microbiol_72_3637 |
| PubMedID: 16672512 |
| Title : Prospecting for biocatalysts and drugs in the genomes of non-cultured microorganisms - Streit_2004_Curr.Opin.Biotechnol_15_285 |
| Author(s) : Streit WR , Daniel R , Jaeger KE |
| Ref : Curr Opin Biotechnol , 15 :285 , 2004 |
| Abstract : |
| PubMedSearch : Streit_2004_Curr.Opin.Biotechnol_15_285 |
| PubMedID: 15296926 |
| Title : An evolutionary hot spot: the pNGR234b replicon of Rhizobium sp. strain NGR234 - Streit_2004_J.Bacteriol_186_535 |
| Author(s) : Streit WR , Schmitz RA , Perret X , Staehelin C , Deakin WJ , Raasch C , Liesegang H , Broughton WJ |
| Ref : Journal of Bacteriology , 186 :535 , 2004 |
| Abstract : |
| PubMedSearch : Streit_2004_J.Bacteriol_186_535 |
| PubMedID: 14702322 |
| Gene_locus related to this paper: rhime-R01391 , rhisn-c3kku8 , rhisn-c3kl46 , rhisn-c3kly5 , rhisn-c3klz9 , rhisn-c3kmf4 , rhisn-c3kmp5 , rhisn-c3knq1 , rhisn-c3krv5 , rhisn-q6w1e1 , rhisn-q6w231 , rhisn-q6w256 , sinmw-a6ugj8 , rhisn-c3km61 |
| Title : Metagenome survey of biofilms in drinking-water networks - Schmeisser_2003_Appl.Environ.Microbiol_69_7298 |
| Author(s) : Schmeisser C , Stockigt C , Raasch C , Wingender J , Timmis KN , Wenderoth DF , Flemming HC , Liesegang H , Schmitz RA , Jaeger KE , Streit WR |
| Ref : Applied Environmental Microbiology , 69 :7298 , 2003 |
| Abstract : |
| PubMedSearch : Schmeisser_2003_Appl.Environ.Microbiol_69_7298 |
| PubMedID: 14660379 |
| Gene_locus related to this paper: 9bact-q6wlc7 |
| Title : Prospecting for novel biocatalysts in a soil metagenome - Voget_2003_Appl.Environ.Microbiol_69_6235 |
| Author(s) : Voget S , Leggewie C , Uesbeck A , Raasch C , Jaeger KE , Streit WR |
| Ref : Applied Environmental Microbiology , 69 :6235 , 2003 |
| Abstract : |
| PubMedSearch : Voget_2003_Appl.Environ.Microbiol_69_6235 |
| PubMedID: 14532085 |
| Gene_locus related to this paper: 9bact-q6xci1 , 9bact-q6xci2 |