Gene_Locus Report

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Gene_locus Report for: ratno-cauxin

Rattus norvegicus (Rat) Carboxylesterase 5A (old est7) Epididymis-specific carboxylesterase 615 protein Carboxylesterase-like urinary excreted protein homolog

Relationship
Family|Carb_B_Chordata
Block| C
Position in NCBI Life Tree|Rattus norvegicus
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Deuterostomia: N E > Chordata: N E > Craniata: N E > Vertebrata: N E > Gnathostomata: N E > Teleostomi: N E > Euteleostomi: N E > Sarcopterygii: N E > Dipnotetrapodomorpha: N E > Tetrapoda: N E > Amniota: N E > Mammalia: N E > Theria: N E > Eutheria: N E > Boreoeutheria: N E > Euarchontoglires: N E > Glires: N E > Rodentia: N E > Myomorpha: N E > Muroidea: N E > Muridae: N E > Murinae: N E > Rattus: N E > Rattus norvegicus: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : AF479659
2 UniProt : Q5GRG2, F1M786
2 UniProt : Q5GRG2, F1M786
2 Interpro : Q5GRG2, F1M786
2 Pfam : Q5GRG2, F1M786
2 PIRSF : Q5GRG2, F1M786
2 SUPERFAM : Q5GRG2, F1M786
Sequence
Graphical view for this peptide sequence: ratno-cauxin
Colored MSA for Carb_B_Chordata (raw)
MSGDWVHTGQALIWVLWIFAAIIRGSVTEEPHRYTRLGWVQGKQATVLGR
LEPVNVFLGIPFAAPPLGPLRFSNPQPPIPWHDLREATTYPNVCFQNLEW
LFIYQNLLKVHYPKLGVSEDCLYLNIYAPAYANDGSRLPVMMWIPGGGFE
TGSASIFDGSALAAYEDVLIVTIQYRLGIFGFFNTQNQHAPGNWAFQDQL
AALQWVRENINYFGGNPDSVTIFGGSAGAISISSLILSPLSAGLFHRAIM
QSGVAIIPSLKNFDDELKHGLQVVADVCKCNVSDSKVLLKCLREKSSLEL
LSLGQKTKAFTRVVDGSFFPEEPMELLSQKTFKTVPSIIGVNNQECGYIL
PMREAPEILFGSNESTALTLIHVLLHIPPQYMHIVAKDYFHGKHSLTDIR
DTLLDLFGDVFFVVPGLVTARNHRDADGPVYFYEFQHRPNCFQNTRPAFV
KADHTDEIRFVFGGPFLEGDVVMFEEATEDEKLLSRKMMSYWANFARSGD
PNGDDLPLWPAYDQNESYLKLDVNISTGWRLKDRRVEFWTDTLPLIMSAS
KALLSPTFPLILFSLLPPSLLSIAS
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MSGDWVHTGQALIWVLWIFAAIIRGSVTEEPHRYTRLGWVQGKQATVLGR
LEPVNVFLGIPFAAPPLGPLRFSNPQPPIPWHDLREATTYPNVCFQNLEW
LFIYQNLLKVHYPKLGVSEDCLYLNIYAPAYANDGSRLPVMMWIPGGGFE
TGSASIFDGSALAAYEDVLIVTIQYRLGIFGFFNTQNQHAPGNWAFQDQL
AALQWVRENINYFGGNPDSVTIFGGSAGAISISSLILSPLSAGLFHRAIM
QSGVAIIPSLKNFDDELKHGLQVVADVCKCNVSDSKVLLKCLREKSSLEL
LSLGQKTKAFTRVVDGSFFPEEPMELLSQKTFKTVPSIIGVNNQECGYIL
PMREAPEILFGSNESTALTLIHVLLHIPPQYMHIVAKDYFHGKHSLTDIR
DTLLDLFGDVFFVVPGLVTARNHRDADGPVYFYEFQHRPNCFQNTRPAFV
KADHTDEIRFVFGGPFLEGDVVMFEEATEDEKLLSRKMMSYWANFARSGD
PNGDDLPLWPAYDQNESYLKLDVNISTGWRLKDRRVEFWTDTLPLIMSAS
KALLSPTFPLILFSLLPPSLLSIAS


References
    Title: Mammalian carboxylesterase 5: comparative biochemistry and genomics
    Holmes RS, Cox LA, Vandeberg JL
    Ref: Comparative Biochemistry & Physiology Part D Genomics Proteomics, 3:195, 2008 : PubMed

            

    Title: Genome sequence of the Brown Norway rat yields insights into mammalian evolution
    Gibbs RA, Weinstock GM, Metzker ML, Muzny DM, Sodergren EJ, Scherer S, Scott G, Steffen D, Worley KC and Collins F <218 more author(s)>
    Ref: Nature, 428:493, 2004 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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