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vibch-y1892

Vibrio cholerae; Vibrio mimicus hypothetical protein vc1892

Comment

Other strains: Vibrio cholerae (serotype O1 M66-2\; ATCC 39541 \/ Ogawa 395 \/ O395\; 12129(1)\; V52\; CIRS101\; AM-19226\; B33\; 1587\; TMA 21\; MAK 757\; 2740-80\; 623-39\; NCTC 8457\; RC27\; MZO-2\; CT 5369-93\; RC9\; TM 11079-80\; MO10\; serotype O1 MJ-1236\; INDRE 91\/1\; bv. albensis VL426\; LMA3984-4\; BX 330286\; RC385\; MZO-3\; CP1044(17)\; HC-71A1\; O1 str. NHCC-008D\; HC-59A1\; O1 str. NHCC-006C\; HC-62B1\; O1 str. EDC-022\; HC-50A2\; HE-46\; O1 str. EC-0027\; HC-55C2\; HC-33A2\; HCUF01\; HC-77A1\; HC-1A2\; HC-78A1\; HC-02C1\; HC-49A2\; O1 str. NHCC-004A\; HC-41A1\; CP1038(11)\; CP1041(14)\; O1 str. EM-1626\; O1 str. PCS-022\; HC-43B1\; O1 str. EDC-020\; HE48\; HC-55A1\; HC-59B1\; O1 str. Nep-21113\; HC-22A1\; O1 str. EM-1546\; HC-19A1\; HE-16\; HC-67A1\; O1 str. EM-1676A\; HE-09\; CP1033(6)\; HC-61A1\; O1 str. PCS-023\; HFU-02\; HC-72A2\; HC-06A1\; O1 str. Inaba G4222\; HC-64A1\; HC-69A1\; O1 str. EC-0051\; HC-23A1\; PS15\; HC-7A1\; HC-47A1\; HC-20A2\; HE-45\; HC-55B2\; HC-80A1\; HC-21A1\; O1 str. 95412\; HC-61A2\; CP1037(10)\; O1 str. 87395\; HC-51A1\; O1 str. EM-1727\; O1 str. EC-0012\; CP1042(15)\; HE-25\; HC-40A1\; HC-60A1\; HC-68A1\; O1 str. 2010EL-1786\; HC-57A1\; HC-81A1\; CP1035(8)\; CP1047(20)\; CP1050(23)\; HC-56A2\; HC-39A1\; HC-56A1\; BJG-01\; CP1032(5)\; CP1048(21)\; CP1040(13)\; HC-70A1\; HC-44C1\; HC-37A1\; HC-65A1\; HC-50A1\; HC-17A1\; O1 str. AG-8040\; HC-41B1\; O1 str. 116063\; O1 str. NHCC-010F\; HC-46A1\; HC-02A1\; IEC224\; O1 str. EM-1536\; HC-32A1\; 4260B\; HC-81A2\; HC-17A2\; HC-46B1\; HC-43A1\; HC-42A1\; HC-62A1\; HC-57A2\; HC-38A1\; O1 str. 116059\; O1 str. EC-0009\; HC-28A1\; HC-48A1\; O1 str. Nep-21106\; CP1046(19)\; HE-40\; HC-52A1\; O1 str. AG-7404\; HE39\; CP1030(3)\; HC-48B2\; HC-36A1)\; Vibrio mimicus (CAIM 602\; MB451\; VM603)

Relationship

Family : abh_upf00227

Block : X

Position in NCBI Life Tree : Vibrio cholerae

(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)

> cellular organisms N E > Bacteria N E > Proteobacteria N E > Gammaproteobacteria N E > Vibrionales N E > Vibrionaceae N E > Vibrio N E > Vibrio cholerae N E

Molecular evidence

No mutation

No structure

No kinetic

No disease

No substrate

No inhibitor

Database

ACYU01000096 ADAF01000001 AE004265 AFOK01000214 AFOL01000216 AFOM01000018 AFON01000164 AFOO01000018 AFOP01000155 AFOQ01000009 AFOR01000015 AFOS01000058 AFOT01000136 AFOU01000222 AFOV01000074 AGUI01000120 AGUJ01000064 AGUK01000121 AGUL01000106 AGUM01000011 AGUN01000126 AGUO01000051 AGUP01000051 AGUQ01000018 AGUR01000173 AGUS01000010 AGUT02000052 AGUU02000060 AGUV02000054 AGUW02000058 AGUX02000048 AGUY02000111 AGUZ02000149 AGVA02000011 AGVB02000134 AGVC02000007 AIJR01000101 AJRL01000031 AJRM01000182 AJRN01000436 AJRO01000011 AJRP01000055 AJRQ01000423 AJRR01000091 AJRS01000149 AJRT01000129 AJRU01000021 AJRV01000050 AJRW01000113 AJRX01000082 AJRY01000083 AJSH01000043 AJSI01000122 AJSJ01000127 AJSK01000046 AJSL01000013 AJSM01000136 AJSN01000047 AJSO01000108 AJSP01000046 ALCZ01000086 ALDA01000015 ALDB01000144 ALDC01000012 ALDD01000188 ALDE01000022 ALDF01000012 ALDG01000217 ALDH01000024 ALDI01000058 ALDJ01000014 ALDK01000212 ALDL01000015 ALDM01000168 ALDN01000106 ALDO01000089 ALDP01000016 ALDQ01000021 ALDR01000188 ALDS01000097 ALDT01000163 ALDU01000237 ALDV01000142 ALDW01000127 ALDX01000192 ALDY01000150 ALDZ01000191 ALEA01000175 ALEB01000068 ALEC01000007 ALED01000026 AMVL01000012 ANNB01000011 AOMO01000024 APFJ01000118 APFK01000150 APFL01000051 APFM01000060 APFN01000108 APFO01000054 APFP01000100 APFQ01000047 APFR01000108 APFS01000121 APFT01000053 APFU01000059 APFV01000115 APFW01000057 APFX01000045 APFY01000104 APFZ01000120 APGA01000095 APGB01000052 APGC01000070 APGD01000050 APGE01000102 APGF01000045 APGG01000052 AXDR01000010 CP000627 CP001233 CP001235 CP003069 CP003330 JDTE01000060

Sequence

Peptide

MIIYLHGFDS NSPGNHEKVL QLQFIDSDVR FINYSTLHPK HDMQHLLKEV HKAIEQSGDP NPLICGVGLG GYWSERIGFL CGIKQVIFNP NLHPELTMQG RIDRPEEYED ISTKCVEKFR AKNQGRCLVI LSRQDEIHDN QKTAQELQDY YDIVWDDTQT HKFKKISHHL QAMKAFKAA

References (12)

Title : Draft Genome Sequence of Vibrio mimicus Strain CAIM 602T - Guardiola-Avila_2013_Genome.Announc_1_e0008413
Author(s) : Guardiola-Avila I , Acedo-Felix E , Noriega-Orozco L , Yepiz-Plascencia G , Sifuentes-Romero I , Gomez-Gil B
Ref : Genome Announc , 1 :e0008413 , 2013
Abstract :
PubMedSearch : Guardiola-Avila_2013_Genome.Announc_1_e0008413
PubMedID: 23516211
Gene_locus related to this paper: vibch-y1892 , vibmi-u4zh77

Title : Genome Sequence of Vibrio cholerae G4222, a South African Clinical Isolate - le Roux_2013_Genome.Announc_1_e0004013
Author(s) : le Roux WJ , Chan WY , De Maayer P , Venter SN
Ref : Genome Announc , 1 :e0004013 , 2013
Abstract :
PubMedSearch : le Roux_2013_Genome.Announc_1_e0004013
PubMedID: 23516184
Gene_locus related to this paper: vibch-y1892

Title : Genome Sequence of Non-O1 Vibrio cholerae PS15 - Kumar_2013_Genome.Announc_1_E00227
Author(s) : Kumar S , Lindquist IE , Sundararajan A , Rajanna C , Floyd JT , Smith KP , Andersen JL , He G , Ayers RM , Johnson JA , Werdann JJ , Sandoval AA , Mojica NM , Schilkey FD , Mudge J , Varela MF
Ref : Genome Announc , 1 :E00227 , 2013
Abstract :
PubMedSearch : Kumar_2013_Genome.Announc_1_E00227
PubMedID: 23409261
Gene_locus related to this paper: vibch-y1892

Title : Complete genome sequence of a sucrose-nonfermenting epidemic strain of Vibrio cholerae O1 from Brazil - de Sa Morais_2012_J.Bacteriol_194_2772
Author(s) : de Sa Morais LL , Garza DR , Loureiro EC , Nunes KN , Vellasco RS , da Silva CP , Nunes MR , Thompson CC , Vicente AC , Santos EC
Ref : Journal of Bacteriology , 194 :2772 , 2012
Abstract :
PubMedSearch : de Sa Morais_2012_J.Bacteriol_194_2772
PubMedID: 22535947
Gene_locus related to this paper: vibch-VC1974 , vibch-y1892

Title : Genome-wide study of the defective sucrose fermenter strain of Vibrio cholerae from the Latin American cholera epidemic - Garza_2012_PLoS.One_7_e37283
Author(s) : Garza DR , Thompson CC , Loureiro EC , Dutilh BE , Inada DT , Junior EC , Cardoso JF , Nunes MR , de Lima CP , Silvestre RV , Nunes KN , Santos EC , Edwards RA , Vicente AC , de Sa Morais LL
Ref : PLoS ONE , 7 :e37283 , 2012
Abstract :
PubMedSearch : Garza_2012_PLoS.One_7_e37283
PubMedID: 22662140
Gene_locus related to this paper: vibch-VC1974 , vibch-y1892

Title : Comparative genomics of Vibrio cholerae from Haiti, Asia, and Africa - Reimer_2011_Emerg.Infect.Dis_17_2113
Author(s) : Reimer AR , Van Domselaar G , Stroika S , Walker M , Kent H , Tarr C , Talkington D , Rowe L , Olsen-Rasmussen M , Frace M , Sammons S , Dahourou GA , Boncy J , Smith AM , Mabon P , Petkau A , Graham M , Gilmour MW , Gerner-Smidt P
Ref : Emerg Infect Dis , 17 :2113 , 2011
Abstract :
PubMedSearch : Reimer_2011_Emerg.Infect.Dis_17_2113
PubMedID: 22099115
Gene_locus related to this paper: vibch-VC1974 , vibch-y1892

Title : Comparative genomics of clinical and environmental Vibrio mimicus - Hasan_2010_Proc.Natl.Acad.Sci.U.S.A_107_21134
Author(s) : Hasan NA , Grim CJ , Haley BJ , Chun J , Alam M , Taviani E , Hoq M , Munk AC , Saunders E , Brettin TS , Bruce DC , Challacombe JF , Detter JC , Han CS , Xie G , Nair GB , Huq A , Colwell RR
Ref : Proc Natl Acad Sci U S A , 107 :21134 , 2010
Abstract :
PubMedSearch : Hasan_2010_Proc.Natl.Acad.Sci.U.S.A_107_21134
PubMedID: 21078967
Gene_locus related to this paper: vibch-VC2610 , vibch-VC2718 , vibch-VCA0688 , vibch-y1892 , vibch-y2276 , vibmi-d0gt41 , vibmi-u4zh77

Title : Genomic taxonomy of Vibrios - Thompson_2009_BMC.Evol.Biol_9_258
Author(s) : Thompson CC , Vicente AC , Souza RC , Vasconcelos AT , Vesth T , Alves N, Jr. , Ussery DW , Iida T , Thompson FL
Ref : BMC Evol Biol , 9 :258 , 2009
Abstract :
PubMedSearch : Thompson_2009_BMC.Evol.Biol_9_258
PubMedID: 19860885
Gene_locus related to this paper: vibal-q1v7b5 , vibal-q1v7d0 , vibal-q1v463 , vibal-q1v627 , vibal-q1v697 , vibal-q1va42 , vibal-q1vai8 , vibal-q1vap1 , vibal-q1vbx2 , vibal-q1vfw6 , vibch-a6xrz3 , vibch-VC2718 , vibch-VCA0688 , vibch-y1892 , vibch-y2276 , vibha-d0x5c8 , vibha-d0x7p9 , vibha-d0xb11 , vibha-d0xgc5 , vibcb-a7mwv0 , vibhb-a7mzs1 , vibhb-a7n5i4 , vibhb-bioh , vibmi-d2y908 , vibmi-d2ygk2 , vibpa-PHAC , vibpa-VPA0468 , vibpa-VPA1467 , vibpa-VPA1496 , vibpa-VPA1595 , vibal-d0wu09 , vibha-d0xda8 , vibmi-u4zh77 , 9vibr-k5u9q4 , vibmi-g0sil5

Title : Comparative genomics reveals mechanism for short-term and long-term clonal transitions in pandemic Vibrio cholerae - Chun_2009_Proc.Natl.Acad.Sci.U.S.A_106_15442
Author(s) : Chun J , Grim CJ , Hasan NA , Lee JH , Choi SY , Haley BJ , Taviani E , Jeon YS , Kim DW , Brettin TS , Bruce DC , Challacombe JF , Detter JC , Han CS , Munk AC , Chertkov O , Meincke L , Saunders E , Walters RA , Huq A , Nair GB , Colwell RR
Ref : Proc Natl Acad Sci U S A , 106 :15442 , 2009
Abstract :
PubMedSearch : Chun_2009_Proc.Natl.Acad.Sci.U.S.A_106_15442
PubMedID: 19720995
Gene_locus related to this paper: vibch-lipas , vibch-VC0135 , vibch-VC1418 , vibch-VC1974 , vibch-VC2432 , vibch-VC2718 , vibch-VCA0063 , vibch-VCA0490 , vibch-VCA0688 , vibch-VCA0754 , vibch-y1892 , vibch-y2276

Title : Genomic analysis of a novel integrative conjugative element in Vibrio cholerae - Taviani_2009_FEBS.Lett_583_3630
Author(s) : Taviani E , Grim CJ , Chun J , Huq A , Colwell RR
Ref : FEBS Letters , 583 :3630 , 2009
Abstract :
PubMedSearch : Taviani_2009_FEBS.Lett_583_3630
PubMedID: 19850044
Gene_locus related to this paper: vibch-lipas , vibch-VC0135 , vibch-VC1418 , vibch-VC2432 , vibch-VC2718 , vibch-VCA0063 , vibch-VCA0490 , vibch-VCA0688 , vibch-VCA0754 , vibch-y1892 , vibch-y2276

Title : A recalibrated molecular clock and independent origins for the cholera pandemic clones - Feng_2008_PLoS.One_3_e4053
Author(s) : Feng L , Reeves PR , Lan R , Ren Y , Gao C , Zhou Z , Cheng J , Wang W , Wang J , Qian W , Li D , Wang L
Ref : PLoS ONE , 3 :e4053 , 2008
Abstract :
PubMedSearch : Feng_2008_PLoS.One_3_e4053
PubMedID: 19115014
Gene_locus related to this paper: vibch-VC1974 , vibch-VC2610 , vibch-VC2718 , vibch-y1892 , vibch-y2276

Title : DNA sequence of both chromosomes of the cholera pathogen Vibrio cholerae - Heidelberg_2000_Nature_406_477
Author(s) : Heidelberg JF , Eisen JA , Nelson WC , Clayton RA , Gwinn ML , Dodson RJ , Haft DH , Hickey EK , Peterson JD , Umayam L , Gill SR , Nelson KE , Read TD , Tettelin H , Richardson D , Ermolaeva MD , Vamathevan J , Bass S , Qin H , Dragoi I , Sellers P , McDonald L , Utterback T , Fleishmann RD , Nierman WC , White O , Salzberg SL , Smith HO , Colwell RR , Mekalanos JJ , Venter JC , Fraser CM
Ref : Nature , 406 :477 , 2000
Abstract :
PubMedSearch : Heidelberg_2000_Nature_406_477
PubMedID: 10952301
Gene_locus related to this paper: vibch-rtxAABH , vibch-lipas , vibch-VC0135 , vibch-VC0522 , vibch-VC1418 , vibch-VC1725 , vibch-VC1974 , vibch-VC1986 , vibch-VC2097 , vibch-VC2432 , vibch-VC2610 , vibch-VC2718 , vibch-VCA0063 , vibch-VCA0092 , vibch-VCA0490 , vibch-VCA0688 , vibch-VCA0754 , vibch-VCA0863 , vibch-y1892 , vibch-y2276