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Gabaldon T

References (13)

Title : Transposons played a major role in the diversification between the closely related almond and peach genomes: results from the almond genome sequence - Alioto_2020_Plant.J_101_455
Author(s) : Alioto T , Alexiou KG , Bardil A , Barteri F , Castanera R , Cruz F , Dhingra A , Duval H , Fernandez IMA , Frias L , Galan B , Garcia JL , Howad W , Gomez-Garrido J , Gut M , Julca I , Morata J , Puigdomenech P , Ribeca P , Rubio Cabetas MJ , Vlasova A , Wirthensohn M , Garcia-Mas J , Gabaldon T , Casacuberta JM , Arus P
Ref : Plant J , 101 :455 , 2020
Abstract :
PubMedSearch : Alioto_2020_Plant.J_101_455
PubMedID: 31529539
Gene_locus related to this paper: prupe-m5wr61

Title : The genome sequence of the grape phylloxera provides insights into the evolution, adaptation, and invasion routes of an iconic pest - Rispe_2020_BMC.Biol_18_90
Author(s) : Rispe C , Legeai F , Nabity PD , Fernandez R , Arora AK , Baa-Puyoulet P , Banfill CR , Bao L , Barbera M , Bouallegue M , Bretaudeau A , Brisson JA , Calevro F , Capy P , Catrice O , Chertemps T , Couture C , Deliere L , Douglas AE , Dufault-Thompson K , Escuer P , Feng H , Forneck A , Gabaldon T , Guigo R , Hilliou F , Hinojosa-Alvarez S , Hsiao YM , Hudaverdian S , Jacquin-Joly E , James EB , Johnston S , Joubard B , Le Goff G , Le Trionnaire G , Librado P , Liu S , Lombaert E , Lu HL , Maibeche M , Makni M , Marcet-Houben M , Martinez-Torres D , Meslin C , Montagne N , Moran NA , Papura D , Parisot N , Rahbe Y , Lopes MR , Ripoll-Cladellas A , Robin S , Roques C , Roux P , Rozas J , Sanchez-Gracia A , Sanchez-Herrero JF , Santesmasses D , Scatoni I , Serre RF , Tang M , Tian W , Umina PA , van Munster M , Vincent-Monegat C , Wemmer J , Wilson ACC , Zhang Y , Zhao C , Zhao J , Zhao S , Zhou X , Delmotte F , Tagu D
Ref : BMC Biol , 18 :90 , 2020
Abstract :
PubMedSearch : Rispe_2020_BMC.Biol_18_90
PubMedID: 32698880

Title : Regulatory Mechanisms of a Highly Pectinolytic Mutant of Penicillium occitanis and Functional Analysis of a Candidate Gene in the Plant Pathogen Fusarium oxysporum - Bravo-Ruiz_2017_Front.Microbiol_8_1627
Author(s) : Bravo-Ruiz G , Sassi AH , Marcet-Houben M , Di Pietro A , Gargouri A , Gabaldon T , Roncero MIG
Ref : Front Microbiol , 8 :1627 , 2017
Abstract :
PubMedSearch : Bravo-Ruiz_2017_Front.Microbiol_8_1627
PubMedID: 28951729
Gene_locus related to this paper: 9euro-a0a2h3iaz6 , 9euro-a0a2h3idj6 , talmq-b6qez0 , 9euro-a0a6v8hq83 , 9euro-a0a2h3iyg9

Title : Genome sequencing and secondary metabolism of the postharvest pathogen Penicillium griseofulvum - Banani_2016_BMC.Genomics_17_19
Author(s) : Banani H , Marcet-Houben M , Ballester AR , Abbruscato P , Gonzalez-Candelas L , Gabaldon T , Spadaro D
Ref : BMC Genomics , 17 :19 , 2016
Abstract :
PubMedSearch : Banani_2016_BMC.Genomics_17_19
PubMedID: 26729047
Gene_locus related to this paper: penpa-a0a135lje1 , penpa-a0a135lr60 , penpa-a0a135le68 , penpa-a0a135lm58 , penpa-a0a135ln75 , penpa-a0a135ljx5

Title : Genome sequence of the olive tree, Olea europaea - Cruz_2016_Gigascience_5_29
Author(s) : Cruz F , Julca I , Gomez-Garrido J , Loska D , Marcet-Houben M , Cano E , Galan B , Frias L , Ribeca P , Derdak S , Gut M , Sanchez-Fernandez M , Garcia JL , Gut IG , Vargas P , Alioto TS , Gabaldon T
Ref : Gigascience , 5 :29 , 2016
Abstract :
PubMedSearch : Cruz_2016_Gigascience_5_29
PubMedID: 27346392
Gene_locus related to this paper: aurpu-a0a1a7mdx5

Title : Genome, Transcriptome, and Functional Analyses of Penicillium expansum Provide New Insights Into Secondary Metabolism and Pathogenicity - Ballester_2015_Mol.Plant.Microbe.Interact_28_232
Author(s) : Ballester AR , Marcet-Houben M , Levin E , Sela N , Selma-Lazaro C , Carmona L , Wisniewski M , Droby S , Gonzalez-Candelas L , Gabaldon T
Ref : Mol Plant Microbe Interact , 28 :232 , 2015
Abstract :
PubMedSearch : Ballester_2015_Mol.Plant.Microbe.Interact_28_232
PubMedID: 25338147
Gene_locus related to this paper: penit-a0a0a2l561 , penen-a0a0a2iyk1 , penen-a0a0a2i229 , penen-a0a0a2i8g2 , penen-a0a0a2ics6 , penen-a0a0a2ify1 , penen-a0a0a2ihw0 , penen-a0a0a2iiw0 , penen-a0a0a2ikw9 , penen-a0a0a2iml7 , penen-a0a0a2iqj9 , penen-a0a0a2ivm8 , penen-a0a0a2ivv1 , penen-a0a0a2iyi6 , penen-a0a0a2iyr7 , penen-a0a0a2jea6 , penen-a0a0a2jfn6 , penen-a0a0a2jis8 , penen-a0a0a2jj44 , penen-a0a0a2jm29 , penen-a0a0a2jn61 , penen-a0a0a2js16 , penen-a0a0a2jub7 , penen-a0a0a2k5c9 , penen-a0a0a2k6i1 , penen-a0a0a2kcd4 , penit-a0a0a2ki35 , penen-a0a0a2kjr7 , penit-a0a0a2ksc5 , penit-a0a0a2ktu4 , penit-a0a0a2kvf2 , penit-a0a0a2kvj8 , penit-a0a0a2kz50 , penit-a0a0a2kzf2 , penit-a0a0a2l3i2 , penit-a0a0a2l784 , penit-a0a0a2l802 , penit-a0a0a2la42 , penit-a0a0a2lc95 , penit-a0a0a2lcl9 , penit-a0a0a2k9q9 , pend2-k9gep5 , penen-a0a0a2jay5 , penit-a0a0a2lf25 , penen-a0a0a2ipm7 , penit-a0a0a2l0j9 , penit-a0a0a2kwb1 , penen-a0a0a2j4q8 , penen-cnsh , penen-a0a0a2kjd4

Title : Sex and parasites: genomic and transcriptomic analysis of Microbotryum lychnidis-dioicae, the biotrophic and plant-castrating anther smut fungus - Perlin_2015_BMC.Genomics_16_461
Author(s) : Perlin MH , Amselem J , Fontanillas E , Toh SS , Chen Z , Goldberg J , Duplessis S , Henrissat B , Young S , Zeng Q , Aguileta G , Petit E , Badouin H , Andrews J , Razeeq D , Gabaldon T , Quesneville H , Giraud T , Hood ME , Schultz DJ , Cuomo CA
Ref : BMC Genomics , 16 :461 , 2015
Abstract :
PubMedSearch : Perlin_2015_BMC.Genomics_16_461
PubMedID: 26076695
Gene_locus related to this paper: ustv1-u5h5e5

Title : The genome of the recently domesticated crop plant sugar beet (Beta vulgaris) - Dohm_2014_Nature_505_546
Author(s) : Dohm JC , Minoche AE , Holtgrawe D , Capella-Gutierrez S , Zakrzewski F , Tafer H , Rupp O , Sorensen TR , Stracke R , Reinhardt R , Goesmann A , Kraft T , Schulz B , Stadler PF , Schmidt T , Gabaldon T , Lehrach H , Weisshaar B , Himmelbauer H
Ref : Nature , 505 :546 , 2014
Abstract :
PubMedSearch : Dohm_2014_Nature_505_546
PubMedID: 24352233
Gene_locus related to this paper: betvu-a0a0j8bcg5 , betvu-a0a0j8fqe7 , spiol-a0a0k9r9x3 , spiol-a0a0k9rit5 , spiol-a0a0k9riw3 , spiol-a0a0k9rub8 , spiol-a0a0k9rxl0 , spiol-a0a0k9qau1 , spiol-a0a0k9rrd8 , spiol-a0a0k9qe58 , spiol-a0a0k9r322 , betvv-a0a0j8b442 , spiol-a0a0k9qnw2 , spiol-a0a0k9ri52 , spiol-a0a0k9r6e9

Title : Genome structure and metabolic features in the red seaweed Chondrus crispus shed light on evolution of the Archaeplastida - Collen_2013_Proc.Natl.Acad.Sci.U.S.A_110_5247
Author(s) : Collen J , Porcel B , Carre W , Ball SG , Chaparro C , Tonon T , Barbeyron T , Michel G , Noel B , Valentin K , Elias M , Artiguenave F , Arun A , Aury JM , Barbosa-Neto JF , Bothwell JH , Bouget FY , Brillet L , Cabello-Hurtado F , Capella-Gutierrez S , Charrier B , Cladiere L , Cock JM , Coelho SM , Colleoni C , Czjzek M , Da Silva C , Delage L , Denoeud F , Deschamps P , Dittami SM , Gabaldon T , Gachon CM , Groisillier A , Herve C , Jabbari K , Katinka M , Kloareg B , Kowalczyk N , Labadie K , LeBlanc C , Lopez PJ , McLachlan DH , Meslet-Cladiere L , Moustafa A , Nehr Z , Nyvall Collen P , Panaud O , Partensky F , Poulain J , Rensing SA , Rousvoal S , Samson G , Symeonidi A , Weissenbach J , Zambounis A , Wincker P , Boyen C
Ref : Proc Natl Acad Sci U S A , 110 :5247 , 2013
Abstract :
PubMedSearch : Collen_2013_Proc.Natl.Acad.Sci.U.S.A_110_5247
PubMedID: 23503846
Gene_locus related to this paper: chocr-r7qut2 , chocr-r7qfm4 , chocr-r7qf11

Title : The genome and development-dependent transcriptomes of Pyronema confluens: a window into fungal evolution - Traeger_2013_PLoS.Genet_9_e1003820
Author(s) : Traeger S , Altegoer F , Freitag M , Gabaldon T , Kempken F , Kumar A , Marcet-Houben M , Poggeler S , Stajich JE , Nowrousian M
Ref : PLoS Genet , 9 :e1003820 , 2013
Abstract :
PubMedSearch : Traeger_2013_PLoS.Genet_9_e1003820
PubMedID: 24068976
Gene_locus related to this paper: pyrom-u4ltg1 , pyrom-u4lhe1 , pyrom-u4kwa3 , pyrom-u4lfu9 , pyrom-u4l0a5 , pyrom-u4l0n5 , pyrom-u4lhv4 , pyrom-u4l8w9 , pyrom-u4lvb8 , pyrom-u4l9c9 , pyrom-u4lwe6 , pyrom-u4l3n9

Title : Genome sequence of the necrotrophic fungus Penicillium digitatum, the main postharvest pathogen of citrus - Marcet-Houben_2012_BMC.Genomics_13_646
Author(s) : Marcet-Houben M , Ballester AR , de la Fuente B , Harries E , Marcos JF , Gonzalez-Candelas L , Gabaldon T
Ref : BMC Genomics , 13 :646 , 2012
Abstract :
PubMedSearch : Marcet-Houben_2012_BMC.Genomics_13_646
PubMedID: 23171342
Gene_locus related to this paper: pend2-k9fpm0 , pend1-k9gj54 , pend1-k9g8k4 , pend1-k9fb74 , pend2-k9gs82 , pend2-k9fwv2 , pend2-k9gsr6 , pend2-k9fhm2 , pend2-k9ga52 , pend1-k9fxn6 , pend1-k9ge15 , pend1-k9f6u9 , pend1-k9gkp0 , pend2-k9frp1 , pend2-k9gep5

Title : The genome of melon (Cucumis melo L.) - Garcia-Mas_2012_Proc.Natl.Acad.Sci.U.S.A_109_11872
Author(s) : Garcia-Mas J , Benjak A , Sanseverino W , Bourgeois M , Mir G , Gonzalez VM , Henaff E , Camara F , Cozzuto L , Lowy E , Alioto T , Capella-Gutierrez S , Blanca J , Canizares J , Ziarsolo P , Gonzalez-Ibeas D , Rodriguez-Moreno L , Droege M , Du L , Alvarez-Tejado M , Lorente-Galdos B , Mele M , Yang L , Weng Y , Navarro A , Marques-Bonet T , Aranda MA , Nuez F , Pico B , Gabaldon T , Roma G , Guigo R , Casacuberta JM , Arus P , Puigdomenech P
Ref : Proc Natl Acad Sci U S A , 109 :11872 , 2012
Abstract :
PubMedSearch : Garcia-Mas_2012_Proc.Natl.Acad.Sci.U.S.A_109_11872
PubMedID: 22753475
Gene_locus related to this paper: cucme-a0a1s3cge4 , cucme-a0a1s3ct47 , cucme-a0a1s3bcl7 , cucsa-a0a0a0m228 , cucme-a0a1s3bnl4 , cucme-a0a1s3b1c9 , cucme-a0a1s3b1d4 , cucme-a0a1s3buy0 , cucme-a0a1s3bva9 , cucme-a0a1s3c6j4 , cucme-a0a1s3cky2 , cucme-a0a1s3clz8 , cucme-a0a1s3buy6 , cucme-a0a1s3bp26

Title : Fine-scale evolution: genomic, phenotypic and ecological differentiation in two coexisting Salinibacter ruber strains - Pena_2010_ISME.J_4_882
Author(s) : Pena A , Teeling H , Huerta-Cepas J , Santos F , Yarza P , Brito-Echeverria J , Lucio M , Schmitt-Kopplin P , Meseguer I , Schenowitz C , Dossat C , Barbe V , Dopazo J , Rossello-Mora R , Schuler M , Glockner FO , Amann R , Gabaldon T , Anton J
Ref : Isme J , 4 :882 , 2010
Abstract :
PubMedSearch : Pena_2010_ISME.J_4_882
PubMedID: 20164864
Gene_locus related to this paper: salrd-q2rzy1 , salrd-q2s0e4 , salrd-q2s1i8