Gene_Locus Report

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Gene_locus Report for: orysa-q7xts6

Oryza sativa subsp. indica subsp. japonica (Rice) osjnba0008m17.7 protein

Relationship
Family|PC-sterol_acyltransferase
Block| L
Position in NCBI Life Tree|Oryza sativa
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Viridiplantae: N E > Streptophyta: N E > Streptophytina: N E > Embryophyta: N E > Tracheophyta: N E > Euphyllophyta: N E > Spermatophyta: N E > Magnoliophyta: N E > Mesangiospermae: N E > Liliopsida: N E > Petrosaviidae: N E > commelinids: N E > Poales: N E > Poaceae: N E > BOP clade: N E > Oryzoideae: N E > Oryzeae: N E > Oryzinae: N E > Oryza: N E > Oryza sativa: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : AL662950
2 UniProt : Q7XTS6, B8AU63
2 UniProt : Q7XTS6, B8AU63
2 Interpro : Q7XTS6, B8AU63
2 Prodom : Q7XTS6, B8AU63
2 Pfam : Q7XTS6, B8AU63
2 PIRSF : Q7XTS6, B8AU63
2 SUPERFAM : Q7XTS6, B8AU63
Sequence
Graphical view for this peptide sequence: orysa-q7xts6
Colored MSA for PC-sterol_acyltransferase (raw)
MAVLEDLIRAIELWLRIAKEQVPLVDPTLDPVLLVPGIGGSILEAVDEAG
KKERVWVRILAADHEFRAHLWSKFDASTGKTVSVDEKTNIVVPEDRYGLY
AIDTLDPDMIIGDDSVCYYHDMIVQMIKWGYQEGKTLFGFGYDFRQSNRL
SETLDRFSRKLESVYIASGEKKINLITHSMGGLLVKCFMSLHSDVFEKYI
KSWIAIAAPFQGAPGYITTSLLNGMSFVEGWESRFFISKWSMQQLLLECP
SIYELLANSTFQWEDTPYLQIWRQKLDTNGKKSAMLESYEPDEAIKMIRE
ALSKHEIISDGMHIPLPLDMDILRWAKETQDVLCNAKLPKSVKFYNIYGT
DYDTAHTVRYGSEHHPISNLSDLLYTQGNYICVDGDGSVPVESAKADGLD
AVARVGVAADHRGIVCDRHVFRIIQHWLHAGEPDPFYDPLNDYVILPTAF
EIEKYHEKHGDITSVREDWEIISHRDDESKRPAELPPMFNTLSASREGED
GSLEEAQATIFVHPESKGRQHVEVRAVGVTHDG
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MAVLEDLIRAIELWLRIAKEQVPLVDPTLDPVLLVPGIGGSILEAVDEAG
KKERVWVRILAADHEFRAHLWSKFDASTGKTVSVDEKTNIVVPEDRYGLY
AIDTLDPDMIIGDDSVCYYHDMIVQMIKWGYQEGKTLFGFGYDFRQSNRL
SETLDRFSRKLESVYIASGEKKINLITHSMGGLLVKCFMSLHSDVFEKYI
KSWIAIAAPFQGAPGYITTSLLNGMSFVEGWESRFFISKWSMQQLLLECP
SIYELLANSTFQWEDTPYLQIWRQKLDTNGKKSAMLESYEPDEAIKMIRE
ALSKHEIISDGMHIPLPLDMDILRWAKETQDVLCNAKLPKSVKFYNIYGT
DYDTAHTVRYGSEHHPISNLSDLLYTQGNYICVDGDGSVPVESAKADGLD
AVARVGVAADHRGIVCDRHVFRIIQHWLHAGEPDPFYDPLNDYVILPTAF
EIEKYHEKHGDITSVREDWEIISHRDDESKRPAELPPMFNTLSASREGED
GSLEEAQATIFVHPESKGRQHVEVRAVGVTHDG


References
2 more
    Title: The Genomes of Oryza sativa: a history of duplications
    Yu J, Wang J, Lin W, Li S, Li H, Zhou J, Ni P, Dong W, Hu S and Yang H <88 more author(s)>
    Ref: PLoS Biol, 3:e38, 2005 : PubMed

            

    Title: Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice
    Kikuchi S, Satoh K, Nagata T, Kawagashira N, Doi K, Kishimoto N, Yazaki J, Ishikawa M, Yamada H and Yasunishi A <64 more author(s)>
    Ref: Science, 301:376, 2003 : PubMed

            

    Title: Sequence and analysis of rice chromosome 4
    Feng Q, Zhang Y, Hao P, Wang S, Fu G, Huang Y, Li Y, Zhu J, Liu Y and Han B <61 more author(s)>
    Ref: Nature, 420:316, 2002 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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