mouse-ndr4

 
Mus musculus (Mouse) NDRG4 ndrg4 protein mkiaa1180

Relationship
Family Ndr_family
Block X
Mus musculus position in NCBI Life Tree :
N link to NCBI taxonomic web page and E link to ESTHER gene locus found in this strain.
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Deuterostomia: N E > Chordata: N E > Craniata: N E > Vertebrata: N E > Gnathostomata: N E > Teleostomi: N E > Euteleostomi: N E > Sarcopterygii: N E > Dipnotetrapodomorpha: N E > Tetrapoda: N E > Amniota: N E > Mammalia: N E > Theria: N E > Eutheria: N E > Boreoeutheria: N E > Euarchontoglires: N E > Glires: N E > Rodentia: N E > Myomorpha: N E > Muroidea: N E > Muridae: N E > Murinae: N E > Mus [genus]: N E > Mus [subgenus]: N E > Mus musculus: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic



>3 Genbank links 1 more: AK129305, AK090374, BC006595
>3 UniProt links 1 more: Q8BTG7, E0CZ50, A0A1D5RM17
>3 UniProtTrembl links 1 more: Q8BTG7, E0CZ50, A0A1D5RM17
>3 Interpro links 1 more: Q8BTG7, E0CZ50, A0A1D5RM17
>3 Prodom links 1 more: Q8BTG7, E0CZ50, A0A1D5RM17
>3 Pfam links 1 more: Q8BTG7, E0CZ50, A0A1D5RM17
>3 PIRSF links 1 more: Q8BTG7, E0CZ50, A0A1D5RM17
>3 SUPERFAM links 1 more: Q8BTG7, E0CZ50, A0A1D5RM17
>3 QuickSwissBlast links 1 more: Q8BTG7, E0CZ50, A0A1D5RM17
1 MGD : 2384590
1 ENSEMBL : ENSMUSG00000036564
 
Sequence
Graphical view for this peptide sequence: mouse-ndr4
Colored MSA for Ndr_family (raw)
MPECWDGEHDIETPYGLLHVVIRGSPKGNRPAILTYHDVGLNHKLCFNTF
FNFEDMQEITKHFVVCHVDAPGQQVGASQFPQGYQFPSMEQLAAMLPSVV
QHFGFKYVIGIGVGAGAYVLAKFALIFPDLVEGLVLMNIDPNGKGWIDWA
ATKLSGLTSTLPDTVLSHLFSQEELVNNTELVQSYRQQISNVVNQANLQL
FWNMYNSRRDLDINRPGTVPNAKTLRCPVMLVVGDNAPAEEGVVECNSKL
DPTTTTFLKMADSGGLPQVTQPGKLTEAFKYFLQGMGYIAHLKDRRLSGG
AVPSASMTRLARSRTASLTSASSVDGSRPQPCAHSDSSEGMGQVNHTMEV
SC
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MPECWDGEHDIETPYGLLHVVIRGSPKGNRPAILTYHDVGLNHKLCFNTF
FNFEDMQEITKHFVVCHVDAPGQQVGASQFPQGYQFPSMEQLAAMLPSVV
QHFGFKYVIGIGVGAGAYVLAKFALIFPDLVEGLVLMNIDPNGKGWIDWA
ATKLSGLTSTLPDTVLSHLFSQEELVNNTELVQSYRQQISNVVNQANLQL
FWNMYNSRRDLDINRPGTVPNAKTLRCPVMLVVGDNAPAEEGVVECNSKL
DPTTTTFLKMADSGGLPQVTQPGKLTEAFKYFLQGMGYIAHLKDRRLSGG
AVPSASMTRLARSRTASLTSASSVDGSRPQPCAHSDSSEGMGQVNHTMEV
SC

no DNA




References
3 more
    Title: NDRG4 protein-deficient mice exhibit spatial learning deficits and vulnerabilities to cerebral ischemia
    Yamamoto H, Kokame K, Okuda T, Nakajo Y, Yanamoto H, Miyata T
    Ref: Journal of Biological Chemistry, 286:26158, 2011 : PubMed

            

    Title: Prediction of the coding sequences of mouse homologues of KIAA gene: III. the complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries
    Okazaki N, Kikuno R, Ohara R, Inamoto S, Koseki H, Hiraoka S, Saga Y, Nagase T, Ohara O, Koga H
    Ref: DNA Research, 10:167, 2003 : PubMed

            

    Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs
    Okazaki Y, Furuno M, Kasukawa T, Adachi J, Bono H, Kondo S, Nikaido I, Osato N, Saito R and Hayashizaki Y <127 more author(s)>
    Ref: Nature, 420:563, 2002 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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