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Gene_locus Report for: rat-Kansl3

Rattus norvegicus (Rat) Non-specific lethal 3 homologue Uncharacterized protein KIAA1310 homolog

Comment
old rat-k1310 K1310_RAT only central part Pfam A Abhydrolase_5 289 436


Relationship
Family|NLS3-Tex30
Block| X
Position in NCBI Life Tree|Rattus norvegicus
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Deuterostomia: N E > Chordata: N E > Craniata: N E > Vertebrata: N E > Gnathostomata: N E > Teleostomi: N E > Euteleostomi: N E > Sarcopterygii: N E > Dipnotetrapodomorpha: N E > Tetrapoda: N E > Amniota: N E > Mammalia: N E > Theria: N E > Eutheria: N E > Boreoeutheria: N E > Euarchontoglires: N E > Glires: N E > Rodentia: N E > Myomorpha: N E > Muroidea: N E > Muridae: N E > Murinae: N E > Rattus: N E > Rattus norvegicus: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : BC105865
1 UniProt : Q3KR73
1 UniProt : Q3KR73
1 Interpro : Q3KR73
1 Prodom : Q3KR73
1 Pfam : Q3KR73
1 PIRSF : Q3KR73
1 SUPERFAM : Q3KR73
Sequence
Graphical view for this peptide sequence: rat-Kansl3
Colored MSA for NLS3-Tex30 (raw)
NKPSKLPGSPLILIASSGPSSSVFPASRRHRFWQSQLSCLGKVIPVATHL
LNNGSGVGVLQCLEHMTGAVRSKVLEIHSHFPHKPIILIGWSTGALVACH
VSVMEYVTAVVCLGFPLLTVDGPRGDVDDPLLDMKTPVLFVIGQNSLQCH
PEAMEDFREKIRAENSLVVVGGADDNLRISKAKKKSEGLTQSMVDRCIQD
EIVDFLTGVLTRA
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

NKPSKLPGSPLILIASSGPSSSVFPASRRHRFWQSQLSCLGKVIPVATHL
LNNGSGVGVLQCLEHMTGAVRSKVLEIHSHFPHKPIILIGWSTGALVACH
VSVMEYVTAVVCLGFPLLTVDGPRGDVDDPLLDMKTPVLFVIGQNSLQCH
PEAMEDFREKIRAENSLVVVGGADDNLRISKAKKKSEGLTQSMVDRCIQD
EIVDFLTGVLTRA


References
    Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)
    Gerhard DS, Wagner L, Feingold EA, Shenmen CM, Grouse LH, Schuler G, Klein SL, Old S, Rasooly R and Malek J <104 more author(s)>
    Ref: Genome Res, 14:2121, 2004 : PubMed

            

    Title: Genome sequence of the Brown Norway rat yields insights into mammalian evolution
    Gibbs RA, Weinstock GM, Metzker ML, Muzny DM, Sodergren EJ, Scherer S, Scott G, Steffen D, Worley KC and Collins F <218 more author(s)>
    Ref: Nature, 428:493, 2004 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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