| Title : Provirophages and transpovirons as the diverse mobilome of giant viruses - Desnues_2012_Proc.Natl.Acad.Sci.U.S.A_109_18078 |
| Author(s) : Desnues C , La Scola B , Yutin N , Fournous G , Robert C , Azza S , Jardot P , Monteil S , Campocasso A , Koonin EV , Raoult D |
| Ref : Proc Natl Acad Sci U S A , 109 :18078 , 2012 |
| Abstract : |
| PubMedSearch : Desnues_2012_Proc.Natl.Acad.Sci.U.S.A_109_18078 |
| PubMedID: 23071316 |
| Gene_locus related to this paper: mimvi-cxes |
| Title : Viruses with more than 1,000 genes: Mamavirus, a new Acanthamoeba polyphaga mimivirus strain, and reannotation of Mimivirus genes - Colson_2011_Genome.Biol.Evol_3_737 |
| Author(s) : Colson P , Yutin N , Shabalina SA , Robert C , Fournous G , La Scola B , Raoult D , Koonin EV |
| Ref : Genome Biol Evol , 3 :737 , 2011 |
| Abstract : |
| PubMedSearch : Colson_2011_Genome.Biol.Evol_3_737 |
| PubMedID: 21705471 |
| Gene_locus related to this paper: mimvi-cxes |
| Title : A korarchaeal genome reveals insights into the evolution of the Archaea - Elkins_2008_Proc.Natl.Acad.Sci.U.S.A_105_8102 |
| Author(s) : Elkins JG , Podar M , Graham DE , Makarova KS , Wolf Y , Randau L , Hedlund BP , Brochier-Armanet C , Kunin V , Anderson I , Lapidus A , Goltsman E , Barry K , Koonin EV , Hugenholtz P , Kyrpides N , Wanner G , Richardson P , Keller M , Stetter KO |
| Ref : Proc Natl Acad Sci U S A , 105 :8102 , 2008 |
| Abstract : |
| PubMedSearch : Elkins_2008_Proc.Natl.Acad.Sci.U.S.A_105_8102 |
| PubMedID: 18535141 |
| Title : Complete genome sequence of the extremely acidophilic methanotroph isolate V4, Methylacidiphilum infernorum, a representative of the bacterial phylum Verrucomicrobia - Hou_2008_Biol.Direct_3_26 |
| Author(s) : Hou S , Makarova KS , Saw JH , Senin P , Ly BV , Zhou Z , Ren Y , Wang J , Galperin MY , Omelchenko MV , Wolf YI , Yutin N , Koonin EV , Stott MB , Mountain BW , Crowe MA , Smirnova AV , Dunfield PF , Feng L , Wang L , Alam M |
| Ref : Biol Direct , 3 :26 , 2008 |
| Abstract : |
| PubMedSearch : Hou_2008_Biol.Direct_3_26 |
| PubMedID: 18593465 |
| Gene_locus related to this paper: meti4-b3dw86 , meti4-b3dx04 |
| Title : Encapsulated in silica: genome, proteome and physiology of the thermophilic bacterium Anoxybacillus flavithermus WK1 - Saw_2008_Genome.Biol_9_R161 |
| Author(s) : Saw JH , Mountain BW , Feng L , Omelchenko MV , Hou S , Saito JA , Stott MB , Li D , Zhao G , Wu J , Galperin MY , Koonin EV , Makarova KS , Wolf YI , Rigden DJ , Dunfield PF , Wang L , Alam M |
| Ref : Genome Biol , 9 :R161 , 2008 |
| Abstract : |
| PubMedSearch : Saw_2008_Genome.Biol_9_R161 |
| PubMedID: 19014707 |
| Gene_locus related to this paper: anofw-b7ghw8 , anofw-b7gk10 , anofw-b7gk45 , anofw-b7gln5 , anofw-b7glx5 , anofw-b7gm70 |
| Title : Genome sequence of the cyanobacterium Prochlorococcus marinus SS120, a nearly minimal oxyphototrophic genome - Dufresne_2003_Proc.Natl.Acad.Sci.U.S.A_100_10020 |
| Author(s) : Dufresne A , Salanoubat M , Partensky F , Artiguenave F , Axmann IM , Barbe V , Duprat S , Galperin MY , Koonin EV , Le Gall F , Makarova KS , Ostrowski M , Oztas S , Robert C , Rogozin IB , Scanlan DJ , Tandeau de Marsac N , Weissenbach J , Wincker P , Wolf YI , Hess WR |
| Ref : Proc Natl Acad Sci U S A , 100 :10020 , 2003 |
| Abstract : |
| PubMedSearch : Dufresne_2003_Proc.Natl.Acad.Sci.U.S.A_100_10020 |
| PubMedID: 12917486 |
| Gene_locus related to this paper: proma-MHPC2 , proma-PRO1109 , proma-q7v9n9 , proma-q7vb48 , proma-q7vb60 , proma-q7vbe1 , proma-q7vbl5 , proma-q7vcg4 , proma-q7vdr9 , proma-q7ved1 |
| Title : The complete genome of hyperthermophile Methanopyrus kandleri AV19 and monophyly of archaeal methanogens - Slesarev_2002_Proc.Natl.Acad.Sci.U.S.A_99_4644 |
| Author(s) : Slesarev AI , Mezhevaya KV , Makarova KS , Polushin NN , Shcherbinina OV , Shakhova VV , Belova GI , Aravind L , Natale DA , Rogozin IB , Tatusov RL , Wolf YI , Stetter KO , Malykh AG , Koonin EV , Kozyavkin SA |
| Ref : Proceedings of the National Academy of Sciences of the United States of America , 99 :4644 , 2002 |
| Abstract : |
| PubMedSearch : Slesarev_2002_Proc.Natl.Acad.Sci.U.S.A_99_4644 |
| PubMedID: 11930014 |
| Title : Genome sequence and comparative analysis of the solvent-producing bacterium Clostridium acetobutylicum - Nolling_2001_J.Bacteriol_183_4823 |
| Author(s) : Nolling J , Breton G , Omelchenko MV , Makarova KS , Zeng Q , Gibson R , Lee HM , Dubois J , Qiu D , Hitti J , Wolf YI , Tatusov RL , Sabathe F , Doucette-Stamm L , Soucaille P , Daly MJ , Bennett GN , Koonin EV , Smith DR |
| Ref : Journal of Bacteriology , 183 :4823 , 2001 |
| Abstract : |
| PubMedSearch : Nolling_2001_J.Bacteriol_183_4823 |
| PubMedID: 11466286 |
| Gene_locus related to this paper: cloab-CAC2917 , cloab-q97db4 , cloab-q97fl1 , cloac-CAC0202 , cloac-CAC0719 , cloac-CAC0816 , cloac-CAC1022 , cloac-CAC1028 , cloac-CAC1450 , cloac-CAC1470 , cloac-CAC1962 , cloac-CAC2246 , cloac-CAC2472 , cloac-CAC2688 , cloac-CAC2936 , cloac-CAC3022 , cloac-CAC3402 , cloac-CAC3407 , cloac-CAC3432 , cloac-CAC3515 , cloac-CAC3665 , cloac-CAP0071 , cloac-CAP0097 , cloac-CAP0133 , cloac-pnbae |
| Title : Bacterial rhodopsin: evidence for a new type of phototrophy in the sea - Beja_2000_Science_289_1902 |
| Author(s) : Beja O , Aravind L , Koonin EV , Suzuki MT , Hadd A , Nguyen LP , Jovanovich SB , Gates CM , Feldman RA , Spudich JL , Spudich EN , DeLong EF |
| Ref : Science , 289 :1902 , 2000 |
| Abstract : |
| PubMedSearch : Beja_2000_Science_289_1902 |
| PubMedID: 10988064 |
| Gene_locus related to this paper: bacte-AF279106.13 , prb01-lipas , prb01-Q9F7Q5 |
| Title : Chromosome 2 sequence of the human malaria parasite Plasmodium falciparum - Gardner_1998_Science_282_1126 |
| Author(s) : Gardner MJ , Tettelin H , Carucci DJ , Cummings LM , Aravind L , Koonin EV , Shallom S , Mason T , Yu K , Fujii C , Pederson J , Shen K , Jing J , Aston C , Lai Z , Schwartz DC , Pertea M , Salzberg S , Zhou L , Sutton GG , Clayton R , White O , Smith HO , Fraser CM , Hoffman SL |
| Ref : Science , 282 :1126 , 1998 |
| Abstract : |
| PubMedSearch : Gardner_1998_Science_282_1126 |
| PubMedID: 9804551 |
| Title : Genome sequence of an obligate intracellular pathogen of humans: Chlamydia trachomatis - Stephens_1998_Science_282_754 |
| Author(s) : Stephens RS , Kalman S , Lammel C , Fan J , Marathe R , Aravind L , Mitchell W , Olinger L , Tatusov RL , Zhao Q , Koonin EV , Davis RW |
| Ref : Science , 282 :754 , 1998 |
| Abstract : |
| PubMedSearch : Stephens_1998_Science_282_754 |
| PubMedID: 9784136 |
| Gene_locus related to this paper: chltr-CT073 , chltr-CT136 , chltr-CT149 , chltr-CT206 |
| Title : A new family of peptidyl-prolyl isomerases - |
| Author(s) : Rudd KE , Sofia HJ , Koonin EV , Plunkett G, 3rd , Lazar S , Rouviere PE |
| Ref : Trends in Biochemical Sciences , 20 :12 , 1995 |
| PubMedID: 7878731 |
| Gene_locus related to this paper: ecoli-pldb |
| Title : Tale of two serines - |
| Author(s) : Koonin EV , Gorbalenya AE |
| Ref : Nature , 338 :467 , 1989 |
| PubMedID: 2494457 |