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References (17)

Title : Unity in variety--the pan-genome of the Chlamydiae - Collingro_2011_Mol.Biol.Evol_28_3253
Author(s) : Collingro A , Tischler P , Weinmaier T , Penz T , Heinz E , Brunham RC , Read TD , Bavoil PM , Sachse K , Kahane S , Friedman MG , Rattei T , Myers GS , Horn M
Ref : Molecular Biology Evolution , 28 :3253 , 2011
Abstract : Collingro_2011_Mol.Biol.Evol_28_3253
ESTHER : Collingro_2011_Mol.Biol.Evol_28_3253
PubMedSearch : Collingro_2011_Mol.Biol.Evol_28_3253
PubMedID: 21690563
Gene_locus related to this paper: parav-f8l1h0 , simnz-f8l8s3 , parav-f8kzh9

Title : Evidence that human Chlamydia pneumoniae was zoonotically acquired - Myers_2009_J.Bacteriol_191_7225
Author(s) : Myers GS , Mathews SA , Eppinger M , Mitchell C , O'Brien KK , White OR , Benahmed F , Brunham RC , Read TD , Ravel J , Bavoil PM , Timms P
Ref : Journal of Bacteriology , 191 :7225 , 2009
Abstract : Myers_2009_J.Bacteriol_191_7225
ESTHER : Myers_2009_J.Bacteriol_191_7225
PubMedSearch : Myers_2009_J.Bacteriol_191_7225
PubMedID: 19749045
Gene_locus related to this paper: chlpn-CPJ0342 , chlpn-CPN0271 , chlpn-q9k1u7

Title : The complete genome sequence of Bacillus anthracis Ames Ancestor - Ravel_2009_J.Bacteriol_191_445
Author(s) : Ravel J , Jiang L , Stanley ST , Wilson MR , Decker RS , Read TD , Worsham P , Keim PS , Salzberg SL , Fraser-Liggett CM , Rasko DA
Ref : Journal of Bacteriology , 191 :445 , 2009
Abstract : Ravel_2009_J.Bacteriol_191_445
ESTHER : Ravel_2009_J.Bacteriol_191_445
PubMedSearch : Ravel_2009_J.Bacteriol_191_445
PubMedID: 18952800
Gene_locus related to this paper: bacan-BA1866 , bacan-BA3703 , bacan-BA3805 , bacan-DHBF , bacce-BC0192 , bacce-BC1788 , bacce-BC4862 , bacce-PHAC , bacan-a0a6l7h3w8

Title : Genome sequence of Chlamydophila caviae (Chlamydia psittaci GPIC): examining the role of niche-specific genes in the evolution of the Chlamydiaceae - Read_2003_Nucleic.Acids.Res_31_2134
Author(s) : Read TD , Myers GS , Brunham RC , Nelson WC , Paulsen IT , Heidelberg J , Holtzapple E , Khouri H , Federova NB , Carty HA , Umayam LA , Haft DH , Peterson J , Beanan MJ , White O , Salzberg SL , Hsia RC , McClarty G , Rank RG , Bavoil PM , Fraser CM
Ref : Nucleic Acids Research , 31 :2134 , 2003
Abstract : Read_2003_Nucleic.Acids.Res_31_2134
ESTHER : Read_2003_Nucleic.Acids.Res_31_2134
PubMedSearch : Read_2003_Nucleic.Acids.Res_31_2134
PubMedID: 12682364
Gene_locus related to this paper: chlca-CCA00443 , chlca-CCA00510 , chlca-CCA00609 , chlca-CCA00614 , chlcv-p94660

Title : Role of mobile DNA in the evolution of vancomycin-resistant Enterococcus faecalis - Paulsen_2003_Science_299_2071
Author(s) : Paulsen IT , Banerjei L , Myers GS , Nelson KE , Seshadri R , Read TD , Fouts DE , Eisen JA , Gill SR , Heidelberg JF , Tettelin H , Dodson RJ , Umayam L , Brinkac L , Beanan M , Daugherty S , DeBoy RT , Durkin S , Kolonay J , Madupu R , Nelson W , Vamathevan J , Tran B , Upton J , Hansen T , Shetty J , Khouri H , Utterback T , Radune D , Ketchum KA , Dougherty BA , Fraser CM
Ref : Science , 299 :2071 , 2003
Abstract : Paulsen_2003_Science_299_2071
ESTHER : Paulsen_2003_Science_299_2071
PubMedSearch : Paulsen_2003_Science_299_2071
PubMedID: 12663927
Gene_locus related to this paper: entfa-EF0101 , entfa-EF0274 , entfa-EF0381 , entfa-EF0449 , entfa-EF0667 , entfa-EF0786 , entfa-EF1028 , entfa-EF1236 , entfa-EF1505 , entfa-EF1536 , entfa-EF1670 , entfa-EF2618 , entfa-EF2728 , entfa-EF2792 , entfa-EF2963 , entfa-EF3191

Title : Complete genome sequence of the Q-fever pathogen Coxiella burnetii - Seshadri_2003_Proc.Natl.Acad.Sci.U.S.A_100_5455
Author(s) : Seshadri R , Paulsen IT , Eisen JA , Read TD , Nelson KE , Nelson WC , Ward NL , Tettelin H , Davidsen TM , Beanan MJ , DeBoy RT , Daugherty SC , Brinkac LM , Madupu R , Dodson RJ , Khouri HM , Lee KH , Carty HA , Scanlan D , Heinzen RA , Thompson HA , Samuel JE , Fraser CM , Heidelberg JF
Ref : Proc Natl Acad Sci U S A , 100 :5455 , 2003
Abstract : Seshadri_2003_Proc.Natl.Acad.Sci.U.S.A_100_5455
ESTHER : Seshadri_2003_Proc.Natl.Acad.Sci.U.S.A_100_5455
PubMedSearch : Seshadri_2003_Proc.Natl.Acad.Sci.U.S.A_100_5455
PubMedID: 12704232
Gene_locus related to this paper: coxbu-BIOH , coxbu-CBU0752 , coxbu-CBU1119 , coxbu-CBU1225 , coxbu-CBU1529 , coxbu-CBU1769 , coxbu-CBU1975

Title : The genome sequence of Bacillus anthracis Ames and comparison to closely related bacteria - Read_2003_Nature_423_81
Author(s) : Read TD , Peterson SN , Tourasse N , Baillie LW , Paulsen IT , Nelson KE , Tettelin H , Fouts DE , Eisen JA , Gill SR , Holtzapple EK , Okstad OA , Helgason E , Rilstone J , Wu M , Kolonay JF , Beanan MJ , Dodson RJ , Brinkac LM , Gwinn M , DeBoy RT , Madpu R , Daugherty SC , Durkin AS , Haft DH , Nelson WC , Peterson JD , Pop M , Khouri HM , Radune D , Benton JL , Mahamoud Y , Jiang L , Hance IR , Weidman JF , Berry KJ , Plaut RD , Wolf AM , Watkins KL , Nierman WC , Hazen A , Cline R , Redmond C , Thwaite JE , White O , Salzberg SL , Thomason B , Friedlander AM , Koehler TM , Hanna PC , Kolsto AB , Fraser CM
Ref : Nature , 423 :81 , 2003
Abstract : Read_2003_Nature_423_81
ESTHER : Read_2003_Nature_423_81
PubMedSearch : Read_2003_Nature_423_81
PubMedID: 12721629
Gene_locus related to this paper: bacan-BA0160 , bacan-BA0950 , bacan-BA0954 , bacan-BA1019 , bacan-BA1242 , bacan-BA1727 , bacan-BA1747 , bacan-BA1866 , bacan-BA1914 , bacan-BA2015 , bacan-BA2392 , bacan-BA2417 , bacan-BA2557 , bacan-BA2607 , bacan-BA2687 , bacan-BA2694 , bacan-BA2738 , bacan-BA2865 , bacan-BA3068 , bacan-BA3165 , bacan-BA3178 , bacan-BA3187 , bacan-BA3343 , bacan-BA3372 , bacan-BA3703 , bacan-BA3805 , bacan-BA3863 , bacan-BA3877 , bacan-BA3887 , bacan-BA4324 , bacan-BA4328 , bacan-BA4338 , bacan-BA4577 , bacan-BA4983 , bacan-BA5009 , bacan-BA5110 , bacan-BA5136 , bacan-DHBF , bacan-q81tt2 , bacce-BC0192 , bacce-BC1788 , bacce-BC1954 , bacce-BC2141 , bacce-BC2171 , bacce-BC4730 , bacce-BC4862 , bacce-BC5130 , bacce-PHAC , bacce-q72yu1 , baccr-pepx

Title : Complete genome sequence and comparative genomic analysis of an emerging human pathogen, serotype V Streptococcus agalactiae - Tettelin_2002_Proc.Natl.Acad.Sci.U.S.A_99_12391
Author(s) : Tettelin H , Masignani V , Cieslewicz MJ , Eisen JA , Peterson S , Wessels MR , Paulsen IT , Nelson KE , Margarit I , Read TD , Madoff LC , Wolf AM , Beanan MJ , Brinkac LM , Daugherty SC , DeBoy RT , Durkin AS , Kolonay JF , Madupu R , Lewis MR , Radune D , Fedorova NB , Scanlan D , Khouri H , Mulligan S , Carty HA , Cline RT , Van Aken SE , Gill J , Scarselli M , Mora M , Iacobini ET , Brettoni C , Galli G , Mariani M , Vegni F , Maione D , Rinaudo D , Rappuoli R , Telford JL , Kasper DL , Grandi G , Fraser CM
Ref : Proc Natl Acad Sci U S A , 99 :12391 , 2002
Abstract : Tettelin_2002_Proc.Natl.Acad.Sci.U.S.A_99_12391
ESTHER : Tettelin_2002_Proc.Natl.Acad.Sci.U.S.A_99_12391
PubMedSearch : Tettelin_2002_Proc.Natl.Acad.Sci.U.S.A_99_12391
PubMedID: 12200547
Gene_locus related to this paper: strag-ESTA , strag-GBS0040 , strag-GBS1828 , strag-pepx , strag-SAG0108 , strag-SAG0246 , strag-SAG0383 , strag-SAG0521 , strag-SAG0679 , strag-SAG0680 , strag-SAG0681 , strag-SAG0785 , strag-SAG0912 , strag-SAG1040 , strag-SAG1562 , strag-SAG2132

Title : Comparative genome sequencing for discovery of novel polymorphisms in Bacillus anthracis - Read_2002_Science_296_2028
Author(s) : Read TD , Salzberg SL , Pop M , Shumway M , Umayam L , Jiang L , Holtzapple E , Busch JD , Smith KL , Schupp JM , Solomon D , Keim P , Fraser CM
Ref : Science , 296 :2028 , 2002
Abstract : Read_2002_Science_296_2028
ESTHER : Read_2002_Science_296_2028
PubMedSearch : Read_2002_Science_296_2028
PubMedID: 12004073

Title : Genome sequence of the dissimilatory metal ion-reducing bacterium Shewanella oneidensis - Heidelberg_2002_Nat.Biotechnol_20_1118
Author(s) : Heidelberg JF , Paulsen IT , Nelson KE , Gaidos EJ , Nelson WC , Read TD , Eisen JA , Seshadri R , Ward N , Methe B , Clayton RA , Meyer T , Tsapin A , Scott J , Beanan M , Brinkac L , Daugherty S , DeBoy RT , Dodson RJ , Durkin AS , Haft DH , Kolonay JF , Madupu R , Peterson JD , Umayam LA , White O , Wolf AM , Vamathevan J , Weidman J , Impraim M , Lee K , Berry K , Lee C , Mueller J , Khouri H , Gill J , Utterback TR , McDonald LA , Feldblyum TV , Smith HO , Venter JC , Nealson KH , Fraser CM
Ref : Nat Biotechnol , 20 :1118 , 2002
Abstract : Heidelberg_2002_Nat.Biotechnol_20_1118
ESTHER : Heidelberg_2002_Nat.Biotechnol_20_1118
PubMedSearch : Heidelberg_2002_Nat.Biotechnol_20_1118
PubMedID: 12368813
Gene_locus related to this paper: sheon-BIOH , sheon-LYPA , sheon-PIP , sheon-PTRB , sheon-q8ej95 , sheon-SO0071 , sheon-SO0614 , sheon-SO0616 , sheon-SO0801 , sheon-SO0880 , sheoe-SO0967 , sheon-SO1006 , sheon-SO1224 , sheon-SO1310 , sheon-SO1534 , sheon-SO1539 , sheon-SO1686 , sheon-SO1743 , sheon-SO1976 , sheon-SO1999 , sheon-SO2024 , sheon-SO2047 , sheon-SO2055 , sheon-SO2223 , sheon-SO2333 , sheon-SO2473 , sheon-SO2582 , sheon-SO2753 , sheon-SO2934 , sheon-SO3025 , sheon-SO3900 , sheon-SO3990 , sheon-SO4252 , sheon-SO4400 , sheon-SO4537 , sheon-SO4543 , sheon-SO4574 , sheon-SO4618 , sheon-SO4650 , sheon-SOA0048 , shefn-SfSFGH , sheon-ym51

Title : Complete genome sequence of a virulent isolate of Streptococcus pneumoniae - Tettelin_2001_Science_293_498
Author(s) : Tettelin H , Nelson KE , Paulsen IT , Eisen JA , Read TD , Peterson S , Heidelberg J , DeBoy RT , Haft DH , Dodson RJ , Durkin AS , Gwinn M , Kolonay JF , Nelson WC , Peterson JD , Umayam LA , White O , Salzberg SL , Lewis MR , Radune D , Holtzapple E , Khouri H , Wolf AM , Utterback TR , Hansen CL , McDonald LA , Feldblyum TV , Angiuoli S , Dickinson T , Hickey EK , Holt IE , Loftus BJ , Yang F , Smith HO , Venter JC , Dougherty BA , Morrison DA , Hollingshead SK , Fraser CM
Ref : Science , 293 :498 , 2001
Abstract : Tettelin_2001_Science_293_498
ESTHER : Tettelin_2001_Science_293_498
PubMedSearch : Tettelin_2001_Science_293_498
PubMedID: 11463916
Gene_locus related to this paper: strp2-q04l35 , strpj-b8zns7 , strpn-AXE1 , strpn-b2dz20 , strpn-pepx , strpn-SP0614 , strpn-SP0666 , strpn-SP0777 , strpn-SP0902 , strpn-SP1343

Title : Genome sequences of Chlamydia trachomatis MoPn and Chlamydia pneumoniae AR39 - Read_2000_Nucleic.Acids.Res_28_1397
Author(s) : Read TD , Brunham RC , Shen C , Gill SR , Heidelberg JF , White O , Hickey EK , Peterson J , Utterback T , Berry K , Bass S , Linher K , Weidman J , Khouri H , Craven B , Bowman C , Dodson R , Gwinn M , Nelson W , Deboy R , Kolonay J , McClarty G , Salzberg SL , Eisen J , Fraser CM
Ref : Nucleic Acids Research , 28 :1397 , 2000
Abstract : Read_2000_Nucleic.Acids.Res_28_1397
ESTHER : Read_2000_Nucleic.Acids.Res_28_1397
PubMedSearch : Read_2000_Nucleic.Acids.Res_28_1397
PubMedID: 10684935
Gene_locus related to this paper: chlmu-TC0345 , chlmu-TC0413 , chlmu-TC0426 , chlmu-TC0478 , chlpn-CPJ0152 , chlpn-CPJ0342 , chlpn-CPN0161 , chlpn-CPN0271 , chlpn-q9jrv1 , chlpn-q9js10 , chlpn-q9k1u7 , chlpn-q9z6x9