Report for Hirakawa H

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References (24)

Title : Cellular plasticity of the bone marrow niche promotes hematopoietic stem cell regeneration - Hirakawa_2023_Nat.Genet__
Author(s) : Hirakawa H , Gao L , Tavakol DN , Vunjak-Novakovic G , Ding L
Ref : Nat Genet , : , 2023
Abstract : Hirakawa_2023_Nat.Genet__
ESTHER : Hirakawa_2023_Nat.Genet__
PubMedSearch : Hirakawa_2023_Nat.Genet__
PubMedID: 37857934

Title : The genome sequence of sweet cherry (Prunus avium) for use in genomics-assisted breeding - Shirasawa_2017_DNA.Res_24_499
Author(s) : Shirasawa K , Isuzugawa K , Ikenaga M , Saito Y , Yamamoto T , Hirakawa H , Isobe S
Ref : DNA Research , 24 :499 , 2017
Abstract : Shirasawa_2017_DNA.Res_24_499
ESTHER : Shirasawa_2017_DNA.Res_24_499
PubMedSearch : Shirasawa_2017_DNA.Res_24_499
PubMedID: 28541388
Gene_locus related to this paper: pruav-a0a6p5tfl8 , pruav-a0a6p5sn52 , pruav-a0a6p5tmj7

Title : Identification of the carotenoid modifying gene PALE YELLOW PETAL 1 as an essential factor in xanthophyll esterification and yellow flower pigmentation in tomato (Solanum lycopersicum) - Ariizumi_2014_Plant.J_79_453
Author(s) : Ariizumi T , Kishimoto S , Kakami R , Maoka T , Hirakawa H , Suzuki Y , Ozeki Y , Shirasawa K , Bernillon S , Okabe Y , Moing A , Asamizu E , Rothan C , Ohmiya A , Ezura H
Ref : Plant J , 79 :453 , 2014
Abstract : Ariizumi_2014_Plant.J_79_453
ESTHER : Ariizumi_2014_Plant.J_79_453
PubMedSearch : Ariizumi_2014_Plant.J_79_453
PubMedID: 24888879
Gene_locus related to this paper: pethy-XES

Title : Draft Genomic DNA Sequence of the Facultatively Methylotrophic Bacterium Acidomonas methanolica type strain MB58 - Higashiura_2014_FEMS.Microbiol.Lett_351_9
Author(s) : Higashiura N , Hadano H , Hirakawa H , Matsutani M , Takebe S , Matsushita K , Azuma Y
Ref : FEMS Microbiology Letters , 351 :9 , 2014
Abstract : Higashiura_2014_FEMS.Microbiol.Lett_351_9
ESTHER : Higashiura_2014_FEMS.Microbiol.Lett_351_9
PubMedSearch : Higashiura_2014_FEMS.Microbiol.Lett_351_9
PubMedID: 24330138
Gene_locus related to this paper: acimt-a0a023da75 , acimt-a0a023d357 , acimt-a0a023d0g4

Title : Complete genome sequence of Bradyrhizobium sp. S23321: insights into symbiosis evolution in soil oligotrophs - Okubo_2012_Microbes.Environ_27_306
Author(s) : Okubo T , Tsukui T , Maita H , Okamoto S , Oshima K , Fujisawa T , Saito A , Futamata H , Hattori R , Shimomura Y , Haruta S , Morimoto S , Wang Y , Sakai Y , Hattori M , Aizawa S , Nagashima KV , Masuda S , Hattori T , Yamashita A , Bao Z , Hayatsu M , Kajiya-Kanegae H , Yoshinaga I , Sakamoto K , Toyota K , Nakao M , Kohara M , Anda M , Niwa R , Jung-Hwan P , Sameshima-Saito R , Tokuda S , Yamamoto S , Yokoyama T , Akutsu T , Nakamura Y , Nakahira-Yanaka Y , Takada Hoshino Y , Hirakawa H , Mitsui H , Terasawa K , Itakura M , Sato S , Ikeda-Ohtsubo W , Sakakura N , Kaminuma E , Minamisawa K
Ref : Microbes Environ , 27 :306 , 2012
Abstract : Okubo_2012_Microbes.Environ_27_306
ESTHER : Okubo_2012_Microbes.Environ_27_306
PubMedSearch : Okubo_2012_Microbes.Environ_27_306
PubMedID: 22452844
Gene_locus related to this paper: 9brad-i0g2u8 , 9brad-i0gf89 , braja-pcaD , 9brad-i0fzh8 , 9brad-i0gfv2 , 9brad-i0g2y4

Title : Complete genome sequence of Bacillus cereus NC7401, which produces high levels of the emetic toxin cereulide - Takeno_2012_J.Bacteriol_194_4767
Author(s) : Takeno A , Okamoto A , Tori K , Oshima K , Hirakawa H , Toh H , Agata N , Yamada K , Ogasawara N , Hayashi T , Shimizu T , Kuhara S , Hattori M , Ohta M
Ref : Journal of Bacteriology , 194 :4767 , 2012
Abstract : Takeno_2012_J.Bacteriol_194_4767
ESTHER : Takeno_2012_J.Bacteriol_194_4767
PubMedSearch : Takeno_2012_J.Bacteriol_194_4767
PubMedID: 22887669
Gene_locus related to this paper: bacce-c2zyv1

Title : Genome-wide phylogenetic analysis of differences in thermotolerance among closely related Acetobacter pasteurianus strains - Matsutani_2012_Microbiology.(Mosc.)_158_229
Author(s) : Matsutani M , Hirakawa H , Saichana N , Soemphol W , Yakushi T , Matsushita K
Ref : Microbiology , 158 :229 , 2012
Abstract : Matsutani_2012_Microbiology.(Mosc.)_158_229
ESTHER : Matsutani_2012_Microbiology.(Mosc.)_158_229
PubMedSearch : Matsutani_2012_Microbiology.(Mosc.)_158_229
PubMedID: 22016572
Gene_locus related to this paper: acepa-h1uu55 , acepa-c7jpi3 , acep3-c7jf97 , acepa-h1uru6

Title : Increased number of Arginine-based salt bridges contributes to the thermotolerance of thermotolerant acetic acid bacteria, Acetobacter tropicalis SKU1100 - Matsutani_2011_Biochem.Biophys.Res.Commun_409_120
Author(s) : Matsutani M , Hirakawa H , Nishikura M , Soemphol W , Ali IA , Yakushi T , Matsushita K
Ref : Biochemical & Biophysical Research Communications , 409 :120 , 2011
Abstract : Matsutani_2011_Biochem.Biophys.Res.Commun_409_120
ESTHER : Matsutani_2011_Biochem.Biophys.Res.Commun_409_120
PubMedSearch : Matsutani_2011_Biochem.Biophys.Res.Commun_409_120
PubMedID: 21554859

Title : Complete Genome Sequence of the Soybean Symbiont Bradyrhizobium japonicum Strain USDA6T - Kaneko_2011_Genes.(Basel)_2_763
Author(s) : Kaneko T , Maita H , Hirakawa H , Uchiike N , Minamisawa K , Watanabe A , Sato S
Ref : Genes (Basel) , 2 :763 , 2011
Abstract : Kaneko_2011_Genes.(Basel)_2_763
ESTHER : Kaneko_2011_Genes.(Basel)_2_763
PubMedSearch : Kaneko_2011_Genes.(Basel)_2_763
PubMedID: 24710291
Gene_locus related to this paper: braja-pcaD , brajp-g7d382 , brajp-g7daf5 , brajp-g7daf6 , brajp-g7dfn9 , brajp-g7dbr2 , brajp-g7dmu1 , brajp-g7dnh7

Title : The genome of the mesopolyploid crop species Brassica rapa - Wang_2011_Nat.Genet_43_1035
Author(s) : Wang X , Wang H , Wang J , Sun R , Wu J , Liu S , Bai Y , Mun JH , Bancroft I , Cheng F , Huang S , Li X , Hua W , Freeling M , Pires JC , Paterson AH , Chalhoub B , Wang B , Hayward A , Sharpe AG , Park BS , Weisshaar B , Liu B , Li B , Tong C , Song C , Duran C , Peng C , Geng C , Koh C , Lin C , Edwards D , Mu D , Shen D , Soumpourou E , Li F , Fraser F , Conant G , Lassalle G , King GJ , Bonnema G , Tang H , Belcram H , Zhou H , Hirakawa H , Abe H , Guo H , Jin H , Parkin IA , Batley J , Kim JS , Just J , Li J , Xu J , Deng J , Kim JA , Yu J , Meng J , Min J , Poulain J , Hatakeyama K , Wu K , Wang L , Fang L , Trick M , Links MG , Zhao M , Jin M , Ramchiary N , Drou N , Berkman PJ , Cai Q , Huang Q , Li R , Tabata S , Cheng S , Zhang S , Sato S , Sun S , Kwon SJ , Choi SR , Lee TH , Fan W , Zhao X , Tan X , Xu X , Wang Y , Qiu Y , Yin Y , Li Y , Du Y , Liao Y , Lim Y , Narusaka Y , Wang Z , Li Z , Xiong Z , Zhang Z
Ref : Nat Genet , 43 :1035 , 2011
Abstract : Wang_2011_Nat.Genet_43_1035
ESTHER : Wang_2011_Nat.Genet_43_1035
PubMedSearch : Wang_2011_Nat.Genet_43_1035
PubMedID: 21873998
Gene_locus related to this paper: braol-Q8GTM3 , braol-Q8GTM4 , brarp-m4ei94 , brarp-m4c988 , brana-a0a078j4a9 , brana-a0a078e1m0 , brana-a0a078cd75 , brarp-m4dwa6 , brana-a0a078j4f0 , brana-a0a078cus4 , brana-a0a078f8c2 , brana-a0a078jql1 , brana-a0a078dgj3 , brana-a0a078hw50 , brana-a0a078cuu0 , brana-a0a078dfa9 , brana-a0a078ic91 , brarp-m4ctw3 , brana-a0a078ca65 , brana-a0a078ctc8 , brana-a0a078h021 , brana-a0a078jx23 , brarp-m4da84 , brarp-m4dwr7 , brana-a0a078dh94 , brana-a0a078h612 , brana-a0a078j2t3 , braol-a0a0d3dpb2 , braol-a0a0d3dx76 , brana-a0a078jxa8 , brana-a0a078i2k3 , brarp-m4cwq4 , brarp-m4dcj8 , brarp-m4eh17 , brarp-m4eey4 , brarp-m4dnj8 , brarp-m4ey83 , brarp-m4ey84

Title : Whole-genome analyses reveal genetic instability of Acetobacter pasteurianus - Azuma_2009_Nucleic.Acids.Res_37_5768
Author(s) : Azuma Y , Hosoyama A , Matsutani M , Furuya N , Horikawa H , Harada T , Hirakawa H , Kuhara S , Matsushita K , Fujita N , Shirai M
Ref : Nucleic Acids Research , 37 :5768 , 2009
Abstract : Azuma_2009_Nucleic.Acids.Res_37_5768
ESTHER : Azuma_2009_Nucleic.Acids.Res_37_5768
PubMedSearch : Azuma_2009_Nucleic.Acids.Res_37_5768
PubMedID: 19638423
Gene_locus related to this paper: acepa-c7jn35 , acepa-c7k2x1 , acepa-c7kgx1 , acepa-c7kzj8 , acepa-este2 , acepa-h1uu55 , acepa-c7jpi3 , acep3-c7jf97

Title : Complete genome sequence of Finegoldia magna, an anaerobic opportunistic pathogen - Goto_2008_DNA.Res_15_39
Author(s) : Goto T , Yamashita A , Hirakawa H , Matsutani M , Todo K , Ohshima K , Toh H , Miyamoto K , Kuhara S , Hattori M , Shimizu T , Akimoto S
Ref : DNA Research , 15 :39 , 2008
Abstract : Goto_2008_DNA.Res_15_39
ESTHER : Goto_2008_DNA.Res_15_39
PubMedSearch : Goto_2008_DNA.Res_15_39
PubMedID: 18263572

Title : Determination of the genome sequence of Porphyromonas gingivalis strain ATCC 33277 and genomic comparison with strain W83 revealed extensive genome rearrangements in P. gingivalis - Naito_2008_DNA.Res_15_215
Author(s) : Naito M , Hirakawa H , Yamashita A , Ohara N , Shoji M , Yukitake H , Nakayama K , Toh H , Yoshimura F , Kuhara S , Hattori M , Hayashi T
Ref : DNA Research , 15 :215 , 2008
Abstract : Naito_2008_DNA.Res_15_215
ESTHER : Naito_2008_DNA.Res_15_215
PubMedSearch : Naito_2008_DNA.Res_15_215
PubMedID: 18524787
Gene_locus related to this paper: porgi-DPP , porgi-q7mub3 , porgi-q7muw6 , porgi-q7mwa7 , porgi-q7mx03

Title : Genome sequence of the cat pathogen, Chlamydophila felis - Azuma_2006_DNA.Res_13_15
Author(s) : Azuma Y , Hirakawa H , Yamashita A , Cai Y , Rahman MA , Suzuki H , Mitaku S , Toh H , Goto S , Murakami T , Sugi K , Hayashi H , Fukushi H , Hattori M , Kuhara S , Shirai M
Ref : DNA Research , 13 :15 , 2006
Abstract : Azuma_2006_DNA.Res_13_15
ESTHER : Azuma_2006_DNA.Res_13_15
PubMedSearch : Azuma_2006_DNA.Res_13_15
PubMedID: 16766509
Gene_locus related to this paper: chlff-q253e0 , chlff-q254l8

Title : Whole genome sequence of Staphylococcus saprophyticus reveals the pathogenesis of uncomplicated urinary tract infection - Kuroda_2005_Proc.Natl.Acad.Sci.U.S.A_102_13272
Author(s) : Kuroda M , Yamashita A , Hirakawa H , Kumano M , Morikawa K , Higashide M , Maruyama A , Inose Y , Matoba K , Toh H , Kuhara S , Hattori M , Ohta T
Ref : Proc Natl Acad Sci U S A , 102 :13272 , 2005
Abstract : Kuroda_2005_Proc.Natl.Acad.Sci.U.S.A_102_13272
ESTHER : Kuroda_2005_Proc.Natl.Acad.Sci.U.S.A_102_13272
PubMedSearch : Kuroda_2005_Proc.Natl.Acad.Sci.U.S.A_102_13272
PubMedID: 16135568
Gene_locus related to this paper: stas1-q4a0b8 , stas1-q4a0z3 , stas1-q4a018 , stas1-q4a076 , stas1-q4a169 , stas1-q49uw5 , stas1-q49vf8 , stas1-q49vg1 , stas1-q49vk0 , stas1-q49w07 , stas1-q49w20 , stas1-q49we3 , stas1-q49wg7 , stas1-q49ws3 , stas1-q49x95 , stas1-q49xp4 , stas1-q49yj4 , stas1-q49zd4 , stas1-q49zs7

Title : Genomic analysis of Bacteroides fragilis reveals extensive DNA inversions regulating cell surface adaptation - Kuwahara_2004_Proc.Natl.Acad.Sci.U.S.A_101_14919
Author(s) : Kuwahara T , Yamashita A , Hirakawa H , Nakayama H , Toh H , Okada N , Kuhara S , Hattori M , Hayashi T , Ohnishi Y
Ref : Proc Natl Acad Sci U S A , 101 :14919 , 2004
Abstract : Kuwahara_2004_Proc.Natl.Acad.Sci.U.S.A_101_14919
ESTHER : Kuwahara_2004_Proc.Natl.Acad.Sci.U.S.A_101_14919
PubMedSearch : Kuwahara_2004_Proc.Natl.Acad.Sci.U.S.A_101_14919
PubMedID: 15466707
Gene_locus related to this paper: bacfn-q5lh43 , bacfr-q64mh3 , bacfr-q64n33 , bacfr-q64qs3 , bacfr-q64t24 , bacfr-q64uj8 , bacfr-q64vl4 , bacfr-q64vx6 , bacfr-q64wh2 , bacfr-q64xp9 , bacfr-q64yv4 , bacfr-q650j0

Title : Complete genome sequence of Clostridium perfringens, an anaerobic flesh-eater - Shimizu_2002_Proc.Natl.Acad.Sci.U.S.A_99_996
Author(s) : Shimizu T , Ohtani K , Hirakawa H , Ohshima K , Yamashita A , Shiba T , Ogasawara N , Hattori M , Kuhara S , Hayashi H
Ref : Proc Natl Acad Sci U S A , 99 :996 , 2002
Abstract : Shimizu_2002_Proc.Natl.Acad.Sci.U.S.A_99_996
ESTHER : Shimizu_2002_Proc.Natl.Acad.Sci.U.S.A_99_996
PubMedSearch : Shimizu_2002_Proc.Natl.Acad.Sci.U.S.A_99_996
PubMedID: 11792842
Gene_locus related to this paper: clope-CPE0307 , clope-CPE0432 , clope-CPE1581 , clope-CPE1596 , clope-CPE1989 , clope-CPE2231 , clope-CPE2312 , clope-lipa , clope-LIPB , clope-PLDB

Title : Comparison of whole genome sequences of Chlamydia pneumoniae J138 from Japan and CWL029 from USA - Shirai_2000_Nucleic.Acids.Res_28_2311
Author(s) : Shirai M , Hirakawa H , Kimoto M , Tabuchi M , Kishi F , Ouchi K , Shiba T , Ishii K , Hattori M , Kuhara S , Nakazawa T
Ref : Nucleic Acids Research , 28 :2311 , 2000
Abstract : Shirai_2000_Nucleic.Acids.Res_28_2311
ESTHER : Shirai_2000_Nucleic.Acids.Res_28_2311
PubMedSearch : Shirai_2000_Nucleic.Acids.Res_28_2311
PubMedID: 10871362
Gene_locus related to this paper: chlpn-CPJ0152 , chlpn-CPJ0342 , chlpn-CPN0161 , chlpn-CPN0271 , chlpn-q9jrv1 , chlpn-q9js10 , chlpn-q9k1u7 , chlpn-q9z6x9

Title : Abnormal internal anal sphincter innervation in patients with Hirschsprung's disease and allied disorders - Kobayashi_1996_J.Pediatr.Surg_31_794
Author(s) : Kobayashi H , Hirakawa H , Puri P
Ref : Journal of Pediatric Surgery , 31 :794 , 1996
Abstract : Kobayashi_1996_J.Pediatr.Surg_31_794
ESTHER : Kobayashi_1996_J.Pediatr.Surg_31_794
PubMedSearch : Kobayashi_1996_J.Pediatr.Surg_31_794
PubMedID: 8783106

Title : Intraoperative evaluation of extent of aganglionosis by a rapid acetylcholinesterase histochemical technique - Kobayashi_1995_J.Pediatr.Surg_30_248
Author(s) : Kobayashi H , Wang Y , Hirakawa H , O'Briain DS , Puri P
Ref : Journal of Pediatric Surgery , 30 :248 , 1995
Abstract : Kobayashi_1995_J.Pediatr.Surg_30_248
ESTHER : Kobayashi_1995_J.Pediatr.Surg_30_248
PubMedSearch : Kobayashi_1995_J.Pediatr.Surg_30_248
PubMedID: 7738746

Title : Intestinal neuronal dysplasia is a possible cause of persistent bowel symptoms after pull-through operation for Hirschsprung's disease - Kobayashi_1995_J.Pediatr.Surg_30_253
Author(s) : Kobayashi H , Hirakawa H , Surana R , O'Briain DS , Puri P
Ref : Journal of Pediatric Surgery , 30 :253 , 1995
Abstract : Kobayashi_1995_J.Pediatr.Surg_30_253
ESTHER : Kobayashi_1995_J.Pediatr.Surg_30_253
PubMedSearch : Kobayashi_1995_J.Pediatr.Surg_30_253
PubMedID: 7738747

Title : Absence of NADPH-diaphorase activity in internal anal sphincter (IAS) achalasia - Hirakawa_1995_J.Pediat.Gastroenterol.Nut_20_54
Author(s) : Hirakawa H , Kobayashi H , O'Briain DS , Puri P
Ref : Journal of Pediatric Gastroenterology & Nutrition , 20 :54 , 1995
Abstract : Hirakawa_1995_J.Pediat.Gastroenterol.Nut_20_54
ESTHER : Hirakawa_1995_J.Pediat.Gastroenterol.Nut_20_54
PubMedSearch : Hirakawa_1995_J.Pediat.Gastroenterol.Nut_20_54
PubMedID: 7533833

Title : A rapid technique of acetylcholinesterase staining - Kobayashi_1994_Arch.Pathol.Lab.Med_118_1127
Author(s) : Kobayashi H , O'Briain DS , Hirakawa H , Wang Y , Puri P
Ref : Archives of Pathology & Laboratory Medicine , 118 :1127 , 1994
Abstract : Kobayashi_1994_Arch.Pathol.Lab.Med_118_1127
ESTHER : Kobayashi_1994_Arch.Pathol.Lab.Med_118_1127
PubMedSearch : Kobayashi_1994_Arch.Pathol.Lab.Med_118_1127
PubMedID: 7526819