Gene_Locus Report

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Gene_locus Report for: orysa-q2qx94

Oryza sativa subsp. japonica subsp. indica (Rice) serine esterase, putative

Comment
only c-term PfamA DUF676 534 731


Relationship
Family|Duf_676
Block| X
Position in NCBI Life Tree|Oryza sativa
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Viridiplantae: N E > Streptophyta: N E > Streptophytina: N E > Embryophyta: N E > Tracheophyta: N E > Euphyllophyta: N E > Spermatophyta: N E > Magnoliophyta: N E > Mesangiospermae: N E > Liliopsida: N E > Petrosaviidae: N E > commelinids: N E > Poales: N E > Poaceae: N E > BOP clade: N E > Oryzoideae: N E > Oryzeae: N E > Oryzinae: N E > Oryza: N E > Oryza sativa: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : DP000011
>3 UniProt links 1 more: Q2QX94, A2ZIE5, Q0IPV9
>3 UniProt links 1 more: Q2QX94, A2ZIE5, Q0IPV9
>3 Interpro links 1 more: Q2QX94, A2ZIE5, Q0IPV9
>3 Pfam links 1 more: Q2QX94, A2ZIE5, Q0IPV9
>3 PIRSF links 1 more: Q2QX94, A2ZIE5, Q0IPV9
>3 SUPERFAM links 1 more: Q2QX94, A2ZIE5, Q0IPV9
Sequence
Graphical view for this peptide sequence: orysa-q2qx94
Colored MSA for Duf_676 (raw)
SSAGKKGRILRAVIFVHGFQGHHLDLRLVRNQWLLLDPGAECLMSEANED
KTSGDFKEMGGRLAGEVVAFLKKKVDKLAKYGGCKELKLSFVGHSIGNVI
IRTALAEPALQPYLKNLYTYMSISGPHLGYWYSSNSLFNSGLWLLKKLKG
AQCIHQLTFSDDQDPQNTFFYKLCKLKTLENFKNIILLSSPQDGYVPYHS
ARIELCPAASSDNSRKGQVFTEMLNNCLDQMRAPTSETRIFMRCDVNFDQ
SAQGRNLNTMIGRAAHIEFLETDIYAKFIMWSFPELFR
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

SSAGKKGRILRAVIFVHGFQGHHLDLRLVRNQWLLLDPGAECLMSEANED
KTSGDFKEMGGRLAGEVVAFLKKKVDKLAKYGGCKELKLSFVGHSIGNVI
IRTALAEPALQPYLKNLYTYMSISGPHLGYWYSSNSLFNSGLWLLKKLKG
AQCIHQLTFSDDQDPQNTFFYKLCKLKTLENFKNIILLSSPQDGYVPYHS
ARIELCPAASSDNSRKGQVFTEMLNNCLDQMRAPTSETRIFMRCDVNFDQ
SAQGRNLNTMIGRAAHIEFLETDIYAKFIMWSFPELFR


References
    Title: Comprehensive sequence analysis of 24,783 barley full-length cDNAs derived from 12 clone libraries
    Matsumoto T, Tanaka T, Sakai H, Amano N, Kanamori H, Kurita K, Kikuta A, Kamiya K, Yamamoto M and Sato K <4 more author(s)>
    Ref: Plant Physiol, 156:20, 2011 : PubMed

            

    Title: The map-based sequence of the rice genome.
    Matsumo T, Sasaki T
    Ref: Nature, 436:793, 2005 : PubMed

            

    Title: The Genomes of Oryza sativa: a history of duplications
    Yu J, Wang J, Lin W, Li S, Li H, Zhou J, Ni P, Dong W, Hu S and Yang H <88 more author(s)>
    Ref: PLoS Biol, 3:e38, 2005 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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