Clark L

References (11)

Title : The Citrobacter rodentium genome sequence reveals convergent evolution with human pathogenic Escherichia coli - Petty_2010_J.Bacteriol_192_525
Author(s) : Petty NK , Bulgin R , Crepin VF , Cerdeno-Tarraga AM , Schroeder GN , Quail MA , Lennard N , Corton C , Barron A , Clark L , Toribio AL , Parkhill J , Dougan G , Frankel G , Thomson NR
Ref : Journal of Bacteriology , 192 :525 , 2010
Abstract :
PubMedSearch : Petty_2010_J.Bacteriol_192_525
PubMedID: 19897651
Gene_locus related to this paper: citk8-bioh , citk8-y1948 , citri-d2th08 , citri-d2tjf8 , citri-d2tjy8 , citri-d2tk80 , citri-d2tmm5 , citri-d2tmq5 , citri-d2tri3 , citri-d2trm8

Title : Comparative genomics of the emerging human pathogen Photorhabdus asymbiotica with the insect pathogen Photorhabdus luminescens - Wilkinson_2009_BMC.Genomics_10_302
Author(s) : Wilkinson P , Waterfield NR , Crossman L , Corton C , Sanchez-Contreras M , Vlisidou I , Barron A , Bignell A , Clark L , Ormond D , Mayho M , Bason N , Smith F , Simmonds M , Churcher C , Harris D , Thompson NR , Quail M , Parkhill J , ffrench-Constant RH
Ref : BMC Genomics , 10 :302 , 2009
Abstract :
PubMedSearch : Wilkinson_2009_BMC.Genomics_10_302
PubMedID: 19583835
Gene_locus related to this paper: phoaa-b6vks1 , phoaa-b6vmd3 , phoaa-c7bgr2 , phoaa-c7bhw5 , phoaa-c7bjq6 , phoaa-c7bk59 , phoaa-c7bnd9 , pholu-lxd2 , pholu-PLU2437 , phoaa-c7bh14 , phoaa-c7bkb9

Title : Co-evolution of genomes and plasmids within Chlamydia trachomatis and the emergence in Sweden of a new variant strain - Seth-Smith_2009_BMC.Genomics_10_239
Author(s) : Seth-Smith HM , Harris SR , Persson K , Marsh P , Barron A , Bignell A , Bjartling C , Clark L , Cutcliffe LT , Lambden PR , Lennard N , Lockey SJ , Quail MA , Salim O , Skilton RJ , Wang Y , Holland MJ , Parkhill J , Thomson NR , Clarke IN
Ref : BMC Genomics , 10 :239 , 2009
Abstract :
PubMedSearch : Seth-Smith_2009_BMC.Genomics_10_239
PubMedID: 19460133
Gene_locus related to this paper: chltr-CT073 , chltr-CT136

Title : Evidence for niche adaptation in the genome of the bovine pathogen Streptococcus uberis - Ward_2009_BMC.Genomics_10_54
Author(s) : Ward PN , Holden MT , Leigh JA , Lennard N , Bignell A , Barron A , Clark L , Quail MA , Woodward J , Barrell BG , Egan SA , Field TR , Maskell D , Kehoe M , Dowson CG , Chanter N , Whatmore AM , Bentley SD , Parkhill J
Ref : BMC Genomics , 10 :54 , 2009
Abstract :
PubMedSearch : Ward_2009_BMC.Genomics_10_54
PubMedID: 19175920
Gene_locus related to this paper: stru0-b9drp1 , stru0-b9dsd7 , stru0-b9dum0 , stru0-b9dvu1 , stru0-pepx

Title : Genome of the actinomycete plant pathogen Clavibacter michiganensis subsp. sepedonicus suggests recent niche adaptation - Bentley_2008_J.Bacteriol_190_2150
Author(s) : Bentley SD , Corton C , Brown SE , Barron A , Clark L , Doggett J , Harris B , Ormond D , Quail MA , May G , Francis D , Knudson D , Parkhill J , Ishimaru CA
Ref : Journal of Bacteriology , 190 :2150 , 2008
Abstract :
PubMedSearch : Bentley_2008_J.Bacteriol_190_2150
PubMedID: 18192393
Gene_locus related to this paper: clam3-a5cqb1 , clam3-a5crq6 , clam3-a5csc5 , clam3-a5css8 , clams-b0rcr0 , clams-b0rdd6 , clams-b0rdd7 , clams-b0rde2 , clams-b0rde3 , clams-b0rer7 , clams-b0rga8 , clams-b0riv5 , clam3-a5cp43 , clam3-a5cp56

Title : Comparative genome analysis of Salmonella Enteritidis PT4 and Salmonella Gallinarum 287\/91 provides insights into evolutionary and host adaptation pathways - Thomson_2008_Genome.Res_18_1624
Author(s) : Thomson NR , Clayton DJ , Windhorst D , Vernikos G , Davidson S , Churcher C , Quail MA , Stevens M , Jones MA , Watson M , Barron A , Layton A , Pickard D , Kingsley RA , Bignell A , Clark L , Harris B , Ormond D , Abdellah Z , Brooks K , Cherevach I , Chillingworth T , Woodward J , Norberczak H , Lord A , Arrowsmith C , Jagels K , Moule S , Mungall K , Sanders M , Whitehead S , Chabalgoity JA , Maskell D , Humphrey T , Roberts M , Barrow PA , Dougan G , Parkhill J
Ref : Genome Res , 18 :1624 , 2008
Abstract :
PubMedSearch : Thomson_2008_Genome.Res_18_1624
PubMedID: 18583645
Gene_locus related to this paper: salen-OPDB , salti-q8z717 , salty-AES , salty-BIOH , salty-DLHH , salty-ENTF , salty-FES , salty-IROD , salty-IROE , salty-P74847 , salty-PLDB , salty-STM0332 , salty-STM4506 , salty-STY1441 , salty-STY2428 , salty-STY3846 , salty-yafa , salty-YBFF , salty-ycfp , salty-YFBB , salty-YHET , salty-YQIA

Title : Extensive DNA inversions in the B. fragilis genome control variable gene expression - Cerdeno-Tarraga_2005_Science_307_1463
Author(s) : Cerdeno-Tarraga AM , Patrick S , Crossman LC , Blakely G , Abratt V , Lennard N , Poxton I , Duerden B , Harris B , Quail MA , Barron A , Clark L , Corton C , Doggett J , Holden MT , Larke N , Line A , Lord A , Norbertczak H , Ormond D , Price C , Rabbinowitsch E , Woodward J , Barrell B , Parkhill J
Ref : Science , 307 :1463 , 2005
Abstract :
PubMedSearch : Cerdeno-Tarraga_2005_Science_307_1463
PubMedID: 15746427
Gene_locus related to this paper: bacfn-q5l8p8 , bacfn-q5lef1 , bacfn-q5lh43 , bacfn-q5lhv2 , bacfr-q64mh3 , bacfr-q64n33 , bacfr-q64qs3 , bacfr-q64t24 , bacfr-q64uj8 , bacfr-q64vx6 , bacfr-q64wh2 , bacfr-q64xp9 , bacfr-q650j0

Title : Disorder-associated mutations lead to functional inactivation of neuroligins - Chih_2004_Hum.Mol.Genet_13_1471
Author(s) : Chih B , Afridi SK , Clark L , Scheiffele P
Ref : Hum Mol Genet , 13 :1471 , 2004
Abstract :
PubMedSearch : Chih_2004_Hum.Mol.Genet_13_1471
PubMedID: 15150161

Title : Complete genomes of two clinical Staphylococcus aureus strains: evidence for the rapid evolution of virulence and drug resistance - Holden_2004_Proc.Natl.Acad.Sci.U.S.A_101_9786
Author(s) : Holden MT , Feil EJ , Lindsay JA , Peacock SJ , Day NP , Enright MC , Foster TJ , Moore CE , Hurst L , Atkin R , Barron A , Bason N , Bentley SD , Chillingworth C , Chillingworth T , Churcher C , Clark L , Corton C , Cronin A , Doggett J , Dowd L , Feltwell T , Hance Z , Harris B , Hauser H , Holroyd S , Jagels K , James KD , Lennard N , Line A , Mayes R , Moule S , Mungall K , Ormond D , Quail MA , Rabbinowitsch E , Rutherford K , Sanders M , Sharp S , Simmonds M , Stevens K , Whitehead S , Barrell BG , Spratt BG , Parkhill J
Ref : Proc Natl Acad Sci U S A , 101 :9786 , 2004
Abstract :
PubMedSearch : Holden_2004_Proc.Natl.Acad.Sci.U.S.A_101_9786
PubMedID: 15213324
Gene_locus related to this paper: staau-d2feb3 , staau-d2uin3 , staau-LIP , staau-lipas , staau-MW0741 , staau-MW2456 , staau-q6gfm6 , staau-SA0011 , staau-SA0569 , staau-SA0572 , staau-SA0897 , staau-SA1143 , staau-SA2240 , staau-SA2306 , staau-SA2367 , staau-SA2422 , staau-SAV0321 , staau-SAV0446 , staau-SAV0457 , staau-SAV0655 , staau-SAV1014 , staau-SAV1765 , staau-SAV1793 , staau-SAV2188 , staau-SAV2350 , staau-SAV2594

Title : Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13 - Hall_2002_Nature_419_527
Author(s) : Hall N , Pain A , Berriman M , Churcher C , Harris B , Harris D , Mungall K , Bowman S , Atkin R , Baker S , Barron A , Brooks K , Buckee CO , Burrows C , Cherevach I , Chillingworth C , Chillingworth T , Christodoulou Z , Clark L , Clark R , Corton C , Cronin A , Davies R , Davis P , Dear P , Dearden F , Doggett J , Feltwell T , Goble A , Goodhead I , Gwilliam R , Hamlin N , Hance Z , Harper D , Hauser H , Hornsby T , Holroyd S , Horrocks P , Humphray S , Jagels K , James KD , Johnson D , Kerhornou A , Knights A , Konfortov B , Kyes S , Larke N , Lawson D , Lennard N , Line A , Maddison M , McLean J , Mooney P , Moule S , Murphy L , Oliver K , Ormond D , Price C , Quail MA , Rabbinowitsch E , Rajandream MA , Rutter S , Rutherford KM , Sanders M , Simmonds M , Seeger K , Sharp S , Smith R , Squares R , Squares S , Stevens K , Taylor K , Tivey A , Unwin L , Whitehead S , Woodward J , Sulston JE , Craig A , Newbold C , Barrell BG
Ref : Nature , 419 :527 , 2002
Abstract :
PubMedSearch : Hall_2002_Nature_419_527
PubMedID: 12368867
Gene_locus related to this paper: plaf7-c0h4q4 , plafa-MAL6P1.135 , plafa-PFD0185C , plafa-PFI1775W , plafa-PFI1800W

Title : Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana - Mayer_1999_Nature_402_769
Author(s) : Mayer K , Schuller C , Wambutt R , Murphy G , Volckaert G , Pohl T , Dusterhoft A , Stiekema W , Entian KD , Terryn N , Harris B , Ansorge W , Brandt P , Grivell L , Rieger M , Weichselgartner M , de Simone V , Obermaier B , Mache R , Muller M , Kreis M , Delseny M , Puigdomenech P , Watson M , Schmidtheini T , Reichert B , Portatelle D , Perez-Alonso M , Boutry M , Bancroft I , Vos P , Hoheisel J , Zimmermann W , Wedler H , Ridley P , Langham SA , McCullagh B , Bilham L , Robben J , Van der Schueren J , Grymonprez B , Chuang YJ , Vandenbussche F , Braeken M , Weltjens I , Voet M , Bastiaens I , Aert R , Defoor E , Weitzenegger T , Bothe G , Ramsperger U , Hilbert H , Braun M , Holzer E , Brandt A , Peters S , van Staveren M , Dirske W , Mooijman P , Klein Lankhorst R , Rose M , Hauf J , Kotter P , Berneiser S , Hempel S , Feldpausch M , Lamberth S , Van den Daele H , De Keyser A , Buysshaert C , Gielen J , Villarroel R , De Clercq R , van Montagu M , Rogers J , Cronin A , Quail M , Bray-Allen S , Clark L , Doggett J , Hall S , Kay M , Lennard N , McLay K , Mayes R , Pettett A , Rajandream MA , Lyne M , Benes V , Rechmann S , Borkova D , Blocker H , Scharfe M , Grimm M , Lohnert TH , Dose S , de Haan M , Maarse A , Schafer M , Muller-Auer S , Gabel C , Fuchs M , Fartmann B , Granderath K , Dauner D , Herzl A , Neumann S , Argiriou A , Vitale D , Liguori R , Piravandi E , Massenet O , Quigley F , Clabauld G , Mundlein A , Felber R , Schnabl S , Hiller R , Schmidt W , Lecharny A , Aubourg S , Chefdor F , Cooke R , Berger C , Montfort A , Casacuberta E , Gibbons T , Weber N , Vandenbol M , Bargues M , Terol J , Torres A , Perez-Perez A , Purnelle B , Bent E , Johnson S , Tacon D , Jesse T , Heijnen L , Schwarz S , Scholler P , Heber S , Francs P , Bielke C , Frishman D , Haase D , Lemcke K , Mewes HW , Stocker S , Zaccaria P , Bevan M , Wilson RK , de la Bastide M , Habermann K , Parnell L , Dedhia N , Gnoj L , Schutz K , Huang E , Spiegel L , Sehkon M , Murray J , Sheet P , Cordes M , Abu-Threideh J , Stoneking T , Kalicki J , Graves T , Harmon G , Edwards J , Latreille P , Courtney L , Cloud J , Abbott A , Scott K , Johnson D , Minx P , Bentley D , Fulton B , Miller N , Greco T , Kemp K , Kramer J , Fulton L , Mardis E , Dante M , Pepin K , Hillier L , Nelson J , Spieth J , Ryan E , Andrews S , Geisel C , Layman D , Du H , Ali J , Berghoff A , Jones K , Drone K , Cotton M , Joshu C , Antonoiu B , Zidanic M , Strong C , Sun H , Lamar B , Yordan C , Ma P , Zhong J , Preston R , Vil D , Shekher M , Matero A , Shah R , Swaby IK , O'Shaughnessy A , Rodriguez M , Hoffmann J , Till S , Granat S , Shohdy N , Hasegawa A , Hameed A , Lodhi M , Johnson A , Chen E , Marra M , Martienssen R , McCombie WR
Ref : Nature , 402 :769 , 1999
Abstract :
PubMedSearch : Mayer_1999_Nature_402_769
PubMedID: 10617198
Gene_locus related to this paper: arath-AT4G00500 , arath-AT4G16690 , arath-AT4G17480 , arath-AT4G24380 , arath-AT4g30610 , arath-o65513 , arath-o65713 , arath-LPAAT , arath-f4jt64