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Engels R

References (8)

Title : Comparative genomics yields insights into niche adaptation of plant vascular wilt pathogens - Klosterman_2011_PLoS.Pathog_7_e1002137
Author(s) : Klosterman SJ , Subbarao KV , Kang S , Veronese P , Gold SE , Thomma BP , Chen Z , Henrissat B , Lee YH , Park J , Garcia-Pedrajas MD , Barbara DJ , Anchieta A , de Jonge R , Santhanam P , Maruthachalam K , Atallah Z , Amyotte SG , Paz Z , Inderbitzin P , Hayes RJ , Heiman DI , Young S , Zeng Q , Engels R , Galagan J , Cuomo CA , Dobinson KF , Ma LJ
Ref : PLoS Pathog , 7 :e1002137 , 2011
Abstract :
PubMedSearch : Klosterman_2011_PLoS.Pathog_7_e1002137
PubMedID: 21829347
Gene_locus related to this paper: vera1-c9srn2 , vera1-c9sn46 , verdv-g2wq49 , verdv-g2xca2 , vera1-c9sea3 , verdv-g2wzn4 , vera1-c9sek2 , verdv-g2wym5 , verdv-g2x5f3 , vera1-c9sx20 , vera1-c9sw01 , verdv-g2x1l1 , verdv-g2wuv4 , verdv-g2xaw5 , verdv-g2wsb2 , verdv-g2wty6 , vera1-c9si59 , verdv-g2xdu9 , vera1-c9s818 , verdv-g2xdr1 , verdv-g2wsw7 , verdv-g2wvq8 , 9pezi-a0a0g4li73 , vera1-kex1 , verdv-g2x8m5

Title : Genomic analysis of the basal lineage fungus Rhizopus oryzae reveals a whole-genome duplication - Ma_2009_PLoS.Genet_5_e1000549
Author(s) : Ma LJ , Ibrahim AS , Skory C , Grabherr MG , Burger G , Butler M , Elias M , Idnurm A , Lang BF , Sone T , Abe A , Calvo SE , Corrochano LM , Engels R , Fu J , Hansberg W , Kim JM , Kodira CD , Koehrsen MJ , Liu B , Miranda-Saavedra D , O'Leary S , Ortiz-Castellanos L , Poulter R , Rodriguez-Romero J , Ruiz-Herrera J , Shen YQ , Zeng Q , Galagan J , Birren BW , Cuomo CA , Wickes BL
Ref : PLoS Genet , 5 :e1000549 , 2009
Abstract :
PubMedSearch : Ma_2009_PLoS.Genet_5_e1000549
PubMedID: 19578406

Title : Dynamics of Pseudomonas aeruginosa genome evolution - Mathee_2008_Proc.Natl.Acad.Sci.U.S.A_105_3100
Author(s) : Mathee K , Narasimhan G , Valdes C , Qiu X , Matewish JM , Koehrsen M , Rokas A , Yandava CN , Engels R , Zeng E , Olavarietta R , Doud M , Smith RS , Montgomery P , White JR , Godfrey PA , Kodira C , Birren B , Galagan JE , Lory S
Ref : Proc Natl Acad Sci U S A , 105 :3100 , 2008
Abstract :
PubMedSearch : Mathee_2008_Proc.Natl.Acad.Sci.U.S.A_105_3100
PubMedID: 18287045
Gene_locus related to this paper: pseae-a3kt39 , pseae-a3l6v1 , pseae-clipa , pseae-CPO , pseae-llipa , pseae-metx , pseae-PA0201 , pseae-PA0231 , pseae-PA0308 , pseae-PA0368 , pseae-PA0480 , pseae-PA0502 , pseae-PA0543 , pseae-PA0599 , pseae-PA1166 , pseae-PA1239 , pseae-PA1291 , pseae-PA1304 , pseae-PA1510 , pseae-PA1558 , pseae-PA1597 , pseae-PA1990 , pseae-PA2086 , pseae-PA2098 , pseae-PA2302 , pseae-PA2425 , pseae-PA2451 , pseae-PA2540 , pseae-PA2682 , pseae-PA2689 , pseae-PA2745 , pseae-PA2764 , pseae-PA2927 , pseae-PA2934 , pseae-PA2949 , pseae-PA3132 , pseae-PA3301 , pseae-PA3324 , pseae-PA3327 , pseae-PA3429 , pseae-PA3586 , pseae-PA3628 , pseae-PA3695 , pseae-PA3859 , pseae-PA3994 , pseae-PA4152 , pseae-PA4968 , pseae-PA5080 , pseae-PHAC2 , pseae-phaD , pseae-phag , pseae-PVDD , pseae-Q8G8C7 , pseae-Q8G8T6 , pseae-Q9APW4 , pseae-rhla , pseae-q9i252

Title : DNA sequence and analysis of human chromosome 8 - Nusbaum_2006_Nature_439_331
Author(s) : Nusbaum C , Mikkelsen TS , Zody MC , Asakawa S , Taudien S , Garber M , Kodira CD , Schueler MG , Shimizu A , Whittaker CA , Chang JL , Cuomo CA , Dewar K , Fitzgerald MG , Yang X , Allen NR , Anderson S , Asakawa T , Blechschmidt K , Bloom T , Borowsky ML , Butler J , Cook A , Corum B , DeArellano K , Decaprio D , Dooley KT , Dorris L, 3rd , Engels R , Glockner G , Hafez N , Hagopian DS , Hall JL , Ishikawa SK , Jaffe DB , Kamat A , Kudoh J , Lehmann R , Lokitsang T , Macdonald P , Major JE , Matthews CD , Mauceli E , Menzel U , Mihalev AH , Minoshima S , Murayama Y , Naylor JW , Nicol R , Nguyen C , O'Leary SB , O'Neill K , Parker SC , Polley A , Raymond CK , Reichwald K , Rodriguez J , Sasaki T , Schilhabel M , Siddiqui R , Smith CL , Sneddon TP , Talamas JA , Tenzin P , Topham K , Venkataraman V , Wen G , Yamazaki S , Young SK , Zeng Q , Zimmer AR , Rosenthal A , Birren BW , Platzer M , Shimizu N , Lander ES
Ref : Nature , 439 :331 , 2006
Abstract :
PubMedSearch : Nusbaum_2006_Nature_439_331
PubMedID: 16421571
Gene_locus related to this paper: human-TG

Title : Analysis of the DNA sequence and duplication history of human chromosome 15 - Zody_2006_Nature_440_671
Author(s) : Zody MC , Garber M , Sharpe T , Young SK , Rowen L , O'Neill K , Whittaker CA , Kamal M , Chang JL , Cuomo CA , Dewar K , Fitzgerald MG , Kodira CD , Madan A , Qin S , Yang X , Abbasi N , Abouelleil A , Arachchi HM , Baradarani L , Birditt B , Bloom S , Bloom T , Borowsky ML , Burke J , Butler J , Cook A , DeArellano K , Decaprio D , Dorris L, 3rd , Dors M , Eichler EE , Engels R , Fahey J , Fleetwood P , Friedman C , Gearin G , Hall JL , Hensley G , Johnson E , Jones C , Kamat A , Kaur A , Locke DP , Munson G , Jaffe DB , Lui A , Macdonald P , Mauceli E , Naylor JW , Nesbitt R , Nicol R , O'Leary SB , Ratcliffe A , Rounsley S , She X , Sneddon KM , Stewart S , Sougnez C , Stone SM , Topham K , Vincent D , Wang S , Zimmer AR , Birren BW , Hood L , Lander ES , Nusbaum C
Ref : Nature , 440 :671 , 2006
Abstract :
PubMedSearch : Zody_2006_Nature_440_671
PubMedID: 16572171
Gene_locus related to this paper: human-DPP8 , human-LIPC , human-SPG21

Title : DNA sequence and analysis of human chromosome 18 - Nusbaum_2005_Nature_437_551
Author(s) : Nusbaum C , Zody MC , Borowsky ML , Kamal M , Kodira CD , Taylor TD , Whittaker CA , Chang JL , Cuomo CA , Dewar K , Fitzgerald MG , Yang X , Abouelleil A , Allen NR , Anderson S , Bloom T , Bugalter B , Butler J , Cook A , Decaprio D , Engels R , Garber M , Gnirke A , Hafez N , Hall JL , Norman CH , Itoh T , Jaffe DB , Kuroki Y , Lehoczky J , Lui A , Macdonald P , Mauceli E , Mikkelsen TS , Naylor JW , Nicol R , Nguyen C , Noguchi H , O'Leary SB , O'Neill K , Piqani B , Smith CL , Talamas JA , Topham K , Totoki Y , Toyoda A , Wain HM , Young SK , Zeng Q , Zimmer AR , Fujiyama A , Hattori M , Birren BW , Sakaki Y , Lander ES
Ref : Nature , 437 :551 , 2005
Abstract :
PubMedSearch : Nusbaum_2005_Nature_437_551
PubMedID: 16177791
Gene_locus related to this paper: human-LIPG

Title : The genome sequence of the filamentous fungus Neurospora crassa - Galagan_2003_Nature_422_859
Author(s) : Galagan JE , Calvo SE , Borkovich KA , Selker EU , Read ND , Jaffe D , FitzHugh W , Ma LJ , Smirnov S , Purcell S , Rehman B , Elkins T , Engels R , Wang S , Nielsen CB , Butler J , Endrizzi M , Qui D , Ianakiev P , Bell-Pedersen D , Nelson MA , Werner-Washburne M , Selitrennikoff CP , Kinsey JA , Braun EL , Zelter A , Schulte U , Kothe GO , Jedd G , Mewes W , Staben C , Marcotte E , Greenberg D , Roy A , Foley K , Naylor J , Stange-Thomann N , Barrett R , Gnerre S , Kamal M , Kamvysselis M , Mauceli E , Bielke C , Rudd S , Frishman D , Krystofova S , Rasmussen C , Metzenberg RL , Perkins DD , Kroken S , Cogoni C , Macino G , Catcheside D , Li W , Pratt RJ , Osmani SA , DeSouza CP , Glass L , Orbach MJ , Berglund JA , Voelker R , Yarden O , Plamann M , Seiler S , Dunlap J , Radford A , Aramayo R , Natvig DO , Alex LA , Mannhaupt G , Ebbole DJ , Freitag M , Paulsen I , Sachs MS , Lander ES , Nusbaum C , Birren B
Ref : Nature , 422 :859 , 2003
Abstract :
PubMedSearch : Galagan_2003_Nature_422_859
PubMedID: 12712197
Gene_locus related to this paper: neucr-5E6.090 , neucr-64C2.080 , neucr-90C4.300 , neucr-a7uw78 , neucr-a7uwh6 , neucr-a7uwy7 , neucr-apth1 , neucr-ATG15 , neucr-B7H23.190 , neucr-B11O8.160 , neucr-B13B3.090 , neucr-B14D6.130 , neucr-B18E6.050 , neucr-B19A17.360 , neucr-B23G1.090 , neucr-CBPYA , neucr-MET5 , neucr-NCU00292.1 , neucr-NCU00350.1 , neucr-NCU00536.1 , neucr-NCU00825.1 , neucr-NCU02148.1 , neucr-NCU02679.1 , neucr-NCU02904.1 , neucr-NCU02924.1 , neucr-NCU03158.1 , neucr-NCU04930.1 , neucr-NCU06332.1 , neucr-NCU06573.1 , neucr-NCU07081.1 , neucr-NCU07415.1 , neucr-NCU07909.1 , neucr-NCU08752.1 , neucr-NCU09575.1 , neucr-NCU10022.1 , neucr-ppme1 , neucr-q6mfs7 , neucr-q7rxb4 , neucr-q7rxv5 , neucr-q7ry06 , neucr-q7ryd2 , neucr-q7rzk2 , neucr-q7s0g7 , neucr-q7s1x0 , neucr-q7s2b3 , neucr-q7s2c5 , neucr-q7s2p4 , neucr-q7s2u9 , neucr-q7s3c6 , neucr-q7s3c8 , neucr-q7s3m2 , neucr-q7s4e3 , neucr-q7s4f8 , neucr-q7s4j4 , neucr-q7s5d6 , neucr-q7s5m2 , neucr-q7s5v8 , neucr-q7s6c5 , neucr-q7s8h2 , neucr-q7s070 , neucr-q7s082 , neucr-q7s134 , neucr-q7s216 , neucr-q7s259 , neucr-q7s260 , neucr-q7s283 , neucr-q7s512 , neucr-q7s736 , neucr-q7s828 , neucr-q7s897 , neucr-q7sbf9 , neucr-q7sbn0 , neucr-q7scr4 , neucr-q7sdw5 , neucr-q7sdx9 , neucr-q7se51 , neucr-q7sea3 , neucr-q7sez8 , neucr-q7sff7 , neucr-q7sga3 , neucr-q7sgj0 , neucr-q7sgp3 , neucr-q7sha3 , neucr-q7sha5 , neucr-q7shu8 , neucr-q9p6a7 , neucr-q872l1 , neucr-f5hbr2 , neucr-q7ry64

Title : The genome of M. acetivorans reveals extensive metabolic and physiological diversity - Galagan_2002_Genome.Res_12_532
Author(s) : Galagan JE , Nusbaum C , Roy A , Endrizzi MG , Macdonald P , FitzHugh W , Calvo S , Engels R , Smirnov S , Atnoor D , Brown A , Allen N , Naylor J , Stange-Thomann N , DeArellano K , Johnson R , Linton L , McEwan P , McKernan K , Talamas J , Tirrell A , Ye W , Zimmer A , Barber RD , Cann I , Graham DE , Grahame DA , Guss AM , Hedderich R , Ingram-Smith C , Kuettner HC , Krzycki JA , Leigh JA , Li W , Liu J , Mukhopadhyay B , Reeve JN , Smith K , Springer TA , Umayam LA , White O , White RH , Conway de Macario E , Ferry JG , Jarrell KF , Jing H , Macario AJ , Paulsen I , Pritchett M , Sowers KR , Swanson RV , Zinder SH , Lander E , Metcalf WW , Birren B
Ref : Genome Res , 12 :532 , 2002
Abstract :
PubMedSearch : Galagan_2002_Genome.Res_12_532
PubMedID: 11932238
Gene_locus related to this paper: metac-MA0077 , metac-MA0362 , metac-MA0419 , metac-MA0736 , metac-MA0993 , metac-MA1571 , metac-MA1856 , metac-MA1857 , metac-MA2002 , metac-MA2343 , metac-MA2629 , metac-MA2691 , metac-MA2743 , metac-MA2933 , metac-MA3611 , metac-MA3635 , metac-MA3920 , metac-META