ecoli-ypt1

Escherichia coli yiea YPT1 YPT2 hypothetical 31.7 kda protein in trax-fino intergenic region encoded on plasmid

Comment

In some bacteria a gene fusion event leads to expression of a CMD with a hydrolase involved in the same pathway In these bifunctional proteins (e.g. O67982) CMD represents the C-terminal domain, Abhydrolase_1 represents the N-terminal domain wb0004. An identical sequence found in Plasmid R100 Trembl Q7AK60 yiea protein. Q27TG2_ECOLI quite different. There are more than 1000 strains. Other Uniprot entries and list of strains can be found with the link: Other strains.

Relationship

Family : Xaa-Pro-like_dom

Block : X

Position in NCBI Life Tree : Escherichia coli

(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)

> cellular organisms N E > Bacteria N E > Proteobacteria N E > Gammaproteobacteria N E > Enterobacterales N E > Enterobacteriaceae N E > Escherichia N E > Escherichia coli N E

Molecular evidence

No mutation

No structure

No kinetic

No disease

No substrate

No inhibitor

Sequence

Peptide

MKITDHKLSE GIALTFRVPE GNIKHPLIIL CHGFCGIRNV LLPCFANAFT EAGFATITFD YRGFGESDGE RGRLVPAMQT EDIISVINWA EKQECIDNQR IGLWGTSLGG GHVFSARAQD QRVKCIVSQL AFADGDVLVT GEMNESERAS FLSTLNKMAE KKKNTGKEMF VGVTRVLSDN ESKVFFEKVK GQYPEMDIKI PFLTVMETLQ YKPAESAAKV QCPVLIVIAG QDSVNPPEQG KALYDAVASG TKELYEEADA CHYDIYEGAF FERVAAVQTQ WFKKHL

References (38)

Title : Genome Sequence of Escherichia coli O157:H7 Strain 2886-75, Associated with the First Reported Case of Human Infection in the United States - Sanjar_2014_Genome.Announc_2_e01120
Author(s) : Sanjar F , Hazen TH , Shah SM , Koenig SS , Agrawal S , Daugherty S , Sadzewicz L , Tallon LJ , Mammel MK , Feng P , Soderlund R , Tarr PI , Debroy C , Dudley EG , Cebula TA , Ravel J , Fraser CM , Rasko DA , Eppinger M
Ref : Genome Announc , 2 : , 2014
Abstract :
PubMedSearch : Sanjar_2014_Genome.Announc_2_e01120
PubMedID: 24407635
Gene_locus related to this paper: ecoli-fes , ecoli-ycfp , ecoli-ypt1 , ecoli-yqia , ecoli-Z1930

Title : Complete Genome Sequences of Two Escherichia coli O145:H28 Outbreak Strains of Food Origin - Cooper_2014_Genome.Announc_2_e00482
Author(s) : Cooper KK , Mandrell RE , Louie JW , Korlach J , Clark TA , Parker CT , Huynh S , Chain PS , Ahmed S , Carter MQ
Ref : Genome Announc , 2 :e00482 , 2014
Abstract :
PubMedSearch : Cooper_2014_Genome.Announc_2_e00482
PubMedID: 24855308
Gene_locus related to this paper: ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ypt1 , ecoli-yqia , ecoli-Z1341

Title : Genome Sequence of Enterotoxigenic Escherichia coli Strain B2C - Madhavan_2014_Genome.Announc_2_e00247
Author(s) : Madhavan TP , Steen JA , Hugenholtz P , Sakellaris H
Ref : Genome Announc , 2 :e00247 , 2014
Abstract :
PubMedSearch : Madhavan_2014_Genome.Announc_2_e00247
PubMedID: 24723709
Gene_locus related to this paper: ecoli-fes , ecoli-yaim , ecoli-ycfp , ecoli-ypt1 , ecoli-yqia , ecoli-YfhR

Title : Comparative genomics of enterohemorrhagic Escherichia coli O145:H28 demonstrates a common evolutionary lineage with Escherichia coli O157:H7 - Cooper_2014_BMC.Genomics_15_17
Author(s) : Cooper KK , Mandrell RE , Louie JW , Korlach J , Clark TA , Parker CT , Huynh S , Chain PS , Ahmed S , Carter MQ
Ref : BMC Genomics , 15 :17 , 2014
Abstract :
PubMedSearch : Cooper_2014_BMC.Genomics_15_17
PubMedID: 24410921
Gene_locus related to this paper: ecoli-fes , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ypt1 , ecoli-yqia , ecoli-Z1341 , ecoli-Z1930 , ecoli-YfhR

Title : Genome Sequences of 228 Shiga Toxin-Producing Escherichia coli Isolates and 12 Isolates Representing Other Diarrheagenic E. coli Pathotypes - Trees_2014_Genome.Announc_2_e00718
Author(s) : Trees E , Strockbine N , Changayil S , Ranganathan S , Zhao K , Weil R , Maccannell D , Sabol A , Schmidtke A , Martin H , Stripling D , Ribot EM , Gerner-Smidt P
Ref : Genome Announc , 2 : , 2014
Abstract :
PubMedSearch : Trees_2014_Genome.Announc_2_e00718
PubMedID: 25103754
Gene_locus related to this paper: ecoli-fes , ecoli-MCMK , ecoli-ybff , ecoli-yiel , ecoli-ypt1 , ecoli-Z1930 , ecoli-YfhR

Title : Whole-Genome Draft Sequences of 26 Enterohemorrhagic Escherichia coli O157:H7 Strains - Eppinger_2013_Genome.Announc_1_e0013412
Author(s) : Eppinger M , Daugherty S , Agrawal S , Galens K , Sengamalay N , Sadzewicz L , Tallon L , Cebula TA , Mammel MK , Feng P , Soderlund R , Tarr PI , Debroy C , Dudley EG , Fraser CM , Ravel J
Ref : Genome Announc , 1 :e0013412 , 2013
Abstract :
PubMedSearch : Eppinger_2013_Genome.Announc_1_e0013412
PubMedID: 23516226
Gene_locus related to this paper: ecoli-fes , ecoli-estX , ecoli-ycfp , ecoli-yhet , ecoli-ypt1 , ecoli-yqia , ecoli-Z1341 , ecoli-Z1930

Title : Draft Genome Sequences of Two Salmonella Strains from the SARA Collection, SARA64 (Muenchen) and SARA33 (Heidelberg), Provide Insight into Their Antibiotic Resistance - Kroft_2013_Genome.Announc_1_e00806
Author(s) : Kroft BS , Brown EW , Meng J , Gonzalez-Escalona N
Ref : Genome Announc , 1 : , 2013
Abstract :
PubMedSearch : Kroft_2013_Genome.Announc_1_e00806
PubMedID: 24092796
Gene_locus related to this paper: ecoli-ypt1

Title : Draft Genome Sequence of the Hypervirulent Klebsiella pneumoniae Strain hvKP1, Isolated in Buffalo, New York - Russo_2013_Genome.Announc_1_e0006513
Author(s) : Russo TA , Gill SR
Ref : Genome Announc , 1 :e0006513 , 2013
Abstract :
PubMedSearch : Russo_2013_Genome.Announc_1_e0006513
PubMedID: 23516199
Gene_locus related to this paper: ecoli-ypt1 , klep7-a6t9v6 , klep7-y1077 , klepn-w8uta0

Title : Genome Sequences of Avian Pathogenic Escherichia coli Strains Isolated from Brazilian Commercial Poultry - Rojas_2013_Genome.Announc_1_e0011013
Author(s) : Rojas TC , Maluta RP , Parizzi LP , Koenigkan LV , Yang J , Yu J , Pereira GA , Dias da Silveira W
Ref : Genome Announc , 1 :e0011013 , 2013
Abstract :
PubMedSearch : Rojas_2013_Genome.Announc_1_e0011013
PubMedID: 23516222
Gene_locus related to this paper: ecoli-d7xp23 , ecoli-IROD , ecoli-IROE , ecoli-estX , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-yiel , ecoli-ypt1 , ecoli-yqia , ecoli-Z1930 , ecoli-YfhR

Title : Draft Genome Sequence of an Escherichia coli O157:H43 Strain Isolated from Cattle - Svab_2013_Genome.Announc_1_E00263
Author(s) : Svab D , Horvath B , Szucs A , Maroti G , Toth I
Ref : Genome Announc , 1 : , 2013
Abstract :
PubMedSearch : Svab_2013_Genome.Announc_1_E00263
PubMedID: 23723396
Gene_locus related to this paper: ecoli-yaim , ecoli-ycfp , ecoli-yhet , ecoli-ypt1 , ecoli-yqia , ecoli-yuar , ecoli-Z1930

Title : Complete Genome Sequence of the Epidemic and Highly Virulent CTX-M-15-Producing H30-Rx Subclone of Escherichia coli ST131 - Andersen_2013_Genome.Announc_1_e00988
Author(s) : Andersen PS , Stegger M , Aziz M , Contente-Cuomo T , Gibbons HS , Keim P , Sokurenko EV , Johnson JR , Price LB
Ref : Genome Announc , 1 :e00988 , 2013
Abstract :
PubMedSearch : Andersen_2013_Genome.Announc_1_e00988
PubMedID: 24309736
Gene_locus related to this paper: ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-yiel , ecoli-ypt1 , ecoli-yqia , ecoli-YfhR , ecolx-f4suw9 , ecolx-g0dan0

Title : Draft genome of a Brazilian avian-pathogenic Escherichia coli strain and in silico characterization of virulence-related genes - Rojas_2012_J.Bacteriol_194_3023
Author(s) : Rojas TC , Parizzi LP , Tiba MR , Chen L , Pereira GA , Sangal V , Yang J , Yu J , Dias da Silveira W
Ref : Journal of Bacteriology , 194 :3023 , 2012
Abstract :
PubMedSearch : Rojas_2012_J.Bacteriol_194_3023
PubMedID: 22582380
Gene_locus related to this paper: ecoli-IROD , ecoli-IROE , ecoli-ycfp , ecoli-YFBB , ecoli-ypt1 , ecoli-YfhR

Title : Draft Genome sequence of Escherichia coli AI27, a porcine isolate belonging to phylogenetic group B1 - Lee_2012_J.Bacteriol_194_6640
Author(s) : Lee K , Yi H , Cho YJ , Jang J , Hur HG , Chun J
Ref : Journal of Bacteriology , 194 :6640 , 2012
Abstract :
PubMedSearch : Lee_2012_J.Bacteriol_194_6640
PubMedID: 23144394
Gene_locus related to this paper: ecoli-IROD , ecoli-yaim , ecoli-ycfp , ecoli-ypt1 , ecoli-yqia , ecoli-YfhR

Title : DNA sequence analysis of the composite plasmid pTC conferring virulence and antimicrobial resistance for porcine enterotoxigenic Escherichia coli - Fekete_2012_Int.J.Med.Microbiol_302_4
Author(s) : Fekete PZ , Brzuszkiewicz E , Blum-Oehler G , Olasz F , Szabo M , Gottschalk G , Hacker J , Nagy B
Ref : Int J Med Microbiol , 302 :4 , 2012
Abstract :
PubMedSearch : Fekete_2012_Int.J.Med.Microbiol_302_4
PubMedID: 22000740
Gene_locus related to this paper: ecoli-ypt1

Title : Draft genome sequences of the diarrheagenic Escherichia coli collection - Hazen_2012_J.Bacteriol_194_3026
Author(s) : Hazen TH , Sahl JW , Redman JC , Morris CR , Daugherty SC , Chibucos MC , Sengamalay NA , Fraser-Liggett CM , Steinsland H , Whittam TS , Whittam B , Manning SD , Rasko DA
Ref : Journal of Bacteriology , 194 :3026 , 2012
Abstract :
PubMedSearch : Hazen_2012_J.Bacteriol_194_3026
PubMedID: 22582382
Gene_locus related to this paper: ecoli-d7xp23 , ecoli-fes , ecoli-MCMK , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-YFBB , ecoli-yhet , ecoli-yiel , ecoli-ypt1 , ecoli-yqia , ecoli-Z1341 , ecoli-Z1930 , ecoli-YfhR

Title : Phylogenetic analysis of non-O157 Shiga toxin-producing Escherichia coli strains by whole-genome sequencing - Ju_2012_J.Clin.Microbiol_50_4123
Author(s) : Ju W , Cao G , Rump L , Strain E , Luo Y , Timme R , Allard M , Zhao S , Brown E , Meng J
Ref : J Clin Microbiol , 50 :4123 , 2012
Abstract :
PubMedSearch : Ju_2012_J.Clin.Microbiol_50_4123
PubMedID: 23052305
Gene_locus related to this paper: ecoli-d7xp23 , ecoli-MCMK , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-yhet , ecoli-yiel , ecoli-ypt1 , ecoli-yqia , ecoli-Z1341 , ecoli-Z1930 , ecoli-YfhR

Title : Genome sequence of a porcine extraintestinal pathogenic Escherichia coli strain - Tan_2011_J.Bacteriol_193_5038
Author(s) : Tan C , Xu Z , Zheng H , Liu W , Tang X , Shou J , Wu B , Wang S , Zhao GP , Chen H
Ref : Journal of Bacteriology , 193 :5038 , 2011
Abstract :
PubMedSearch : Tan_2011_J.Bacteriol_193_5038
PubMedID: 21742868
Gene_locus related to this paper: ecoli-IROD , ecoli-IROE , ecoli-ycfp , ecoli-YFBB , ecoli-ypt1 , ecoli-yqia

Title : Sequence analysis and characterization of a transferable hybrid plasmid encoding multidrug resistance and enabling zoonotic potential for extraintestinal Escherichia coli - Johnson_2010_Infect.Immun_78_1931
Author(s) : Johnson TJ , Jordan D , Kariyawasam S , Stell AL , Bell NP , Wannemuehler YM , Alarcon CF , Li G , Tivendale KA , Logue CM , Nolan LK
Ref : Infect Immun , 78 :1931 , 2010
Abstract :
PubMedSearch : Johnson_2010_Infect.Immun_78_1931
PubMedID: 20160015
Gene_locus related to this paper: ecoli-IROD , ecoli-IROE , ecoli-rdmC , ecoli-ypt1

Title : Complete genome sequence of the wild-type commensal Escherichia coli strain SE15, belonging to phylogenetic group B2 - Toh_2010_J.Bacteriol_192_1165
Author(s) : Toh H , Oshima K , Toyoda A , Ogura Y , Ooka T , Sasamoto H , Park SH , Iyoda S , Kurokawa K , Morita H , Itoh K , Taylor TD , Hayashi T , Hattori M
Ref : Journal of Bacteriology , 192 :1165 , 2010
Abstract :
PubMedSearch : Toh_2010_J.Bacteriol_192_1165
PubMedID: 20008064
Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C0410 , ecoli-C2429 , ecoli-C4836 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-ypfh , ecoli-ypt1 , ecoli-yqia , ecoli-YfhR , ecos5-d2nhh3 , yerpe-YBTT , ecolx-f4suw9

Title : Multiple antibiotic resistance gene recruitment onto the enterohemorrhagic Escherichia coli virulence plasmid - Venturini_2010_FASEB.J_24_1160
Author(s) : Venturini C , Beatson SA , Djordjevic SP , Walker MJ
Ref : FASEB Journal , 24 :1160 , 2010
Abstract :
PubMedSearch : Venturini_2010_FASEB.J_24_1160
PubMedID: 19917674
Gene_locus related to this paper: ecoli-ypt1

Title : Pyrosequencing of the Vir plasmid of necrotoxigenic Escherichia coli - Johnson_2010_Vet.Microbiol_144_100
Author(s) : Johnson TJ , Debroy C , Belton S , Williams ML , Lawrence M , Nolan LK , Thorsness JL
Ref : Vet Microbiol , 144 :100 , 2010
Abstract :
PubMedSearch : Johnson_2010_Vet.Microbiol_144_100
PubMedID: 20060660
Gene_locus related to this paper: ecoli-ypt1 , ecoli-yuar

Title : Analysis of the genome of the Escherichia coli O157:H7 2006 spinach-associated outbreak isolate indicates candidate genes that may enhance virulence - Kulasekara_2009_Infect.Immun_77_3713
Author(s) : Kulasekara BR , Jacobs M , Zhou Y , Wu Z , Sims E , Saenphimmachak C , Rohmer L , Ritchie JM , Radey M , McKevitt M , Freeman TL , Hayden H , Haugen E , Gillett W , Fong C , Chang J , Beskhlebnaya V , Waldor MK , Samadpour M , Whittam TS , Kaul R , Brittnacher M , Miller SI
Ref : Infect Immun , 77 :3713 , 2009
Abstract :
PubMedSearch : Kulasekara_2009_Infect.Immun_77_3713
PubMedID: 19564389
Gene_locus related to this paper: eco57-b3a913 , ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C0410 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-MCMK , ecoli-mhpc , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-ypt1 , ecoli-yqia , ecoli-Z0347 , ecoli-Z1341 , ecoli-Z1930 , ecoli-YfhR

Title : The conserved portion of the putative virulence region contributes to virulence of avian pathogenic Escherichia coli - Tivendale_2009_Microbiology_155_450
Author(s) : Tivendale KA , Noormohammadi AH , Allen JL , Browning GF
Ref : Microbiology , 155 :450 , 2009
Abstract :
PubMedSearch : Tivendale_2009_Microbiology_155_450
PubMedID: 19202093
Gene_locus related to this paper: ecoli-IROD , ecoli-IROE , ecoli-ypt1

Title : Comparative genomics reveal the mechanism of the parallel evolution of O157 and non-O157 enterohemorrhagic Escherichia coli - Ogura_2009_Proc.Natl.Acad.Sci.U.S.A_106_17939
Author(s) : Ogura Y , Ooka T , Iguchi A , Toh H , Asadulghani M , Oshima K , Kodama T , Abe H , Nakayama K , Kurokawa K , Tobe T , Hattori M , Hayashi T
Ref : Proc Natl Acad Sci U S A , 106 :17939 , 2009
Abstract :
PubMedSearch : Ogura_2009_Proc.Natl.Acad.Sci.U.S.A_106_17939
PubMedID: 19815525
Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C2429 , ecoli-C4836 , ecoli-d7xp23 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-ypt1 , ecoli-yqia , ecoli-Z1341 , ecoli-Z1930 , ecoli-Z2445 , ecoli-YfhR , yerpe-YBTT

Title : Full sequence and comparative analysis of the plasmid pAPEC-1 of avian pathogenic E. coli chi7122 (O78:K80:H9) - Mellata_2009_PLoS.One_4_e4232
Author(s) : Mellata M , Touchman JW , Curtiss R
Ref : PLoS ONE , 4 :e4232 , 2009
Abstract :
PubMedSearch : Mellata_2009_PLoS.One_4_e4232
PubMedID: 19156210
Gene_locus related to this paper: ecoli-ypt1

Title : Complete genome sequence and comparative genome analysis of enteropathogenic Escherichia coli O127:H6 strain E2348\/69 - Iguchi_2009_J.Bacteriol_191_347
Author(s) : Iguchi A , Thomson NR , Ogura Y , Saunders D , Ooka T , Henderson IR , Harris D , Asadulghani M , Kurokawa K , Dean P , Kenny B , Quail MA , Thurston S , Dougan G , Hayashi T , Parkhill J , Frankel G
Ref : Journal of Bacteriology , 191 :347 , 2009
Abstract :
PubMedSearch : Iguchi_2009_J.Bacteriol_191_347
PubMedID: 18952797
Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C0410 , ecoli-C4836 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-ypfh , ecoli-ypt1 , ecoli-yqia , ecoli-YfhR

Title : Organised genome dynamics in the Escherichia coli species results in highly diverse adaptive paths - Touchon_2009_PLoS.Genet_5_e1000344
Author(s) : Touchon M , Hoede C , Tenaillon O , Barbe V , Baeriswyl S , Bidet P , Bingen E , Bonacorsi S , Bouchier C , Bouvet O , Calteau A , Chiapello H , Clermont O , Cruveiller S , Danchin A , Diard M , Dossat C , Karoui ME , Frapy E , Garry L , Ghigo JM , Gilles AM , Johnson J , Le Bouguenec C , Lescat M , Mangenot S , Martinez-Jehanne V , Matic I , Nassif X , Oztas S , Petit MA , Pichon C , Rouy Z , Ruf CS , Schneider D , Tourret J , Vacherie B , Vallenet D , Medigue C , Rocha EP , Denamur E
Ref : PLoS Genet , 5 :e1000344 , 2009
Abstract :
PubMedSearch : Touchon_2009_PLoS.Genet_5_e1000344
PubMedID: 19165319
Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C0410 , ecoli-C2429 , ecoli-C3633 , ecoli-C3636 , ecoli-C4836 , ecoli-d7xp23 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-IROD , ecoli-IROE , ecoli-mhpc , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-ypt1 , ecoli-yqia , ecoli-Z0347 , ecoli-Z1930 , ecoli-YfhR , ecout-q1r7l6 , escfe-e9z855 , yerpe-YBTT , ecolx-e0qx45

Title : The pangenome structure of Escherichia coli: comparative genomic analysis of E. coli commensal and pathogenic isolates - Rasko_2008_J.Bacteriol_190_6881
Author(s) : Rasko DA , Rosovitz MJ , Myers GS , Mongodin EF , Fricke WF , Gajer P , Crabtree J , Sebaihia M , Thomson NR , Chaudhuri R , Henderson IR , Sperandio V , Ravel J
Ref : Journal of Bacteriology , 190 :6881 , 2008
Abstract :
PubMedSearch : Rasko_2008_J.Bacteriol_190_6881
PubMedID: 18676672
Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C4836 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-ypt1 , ecoli-yqia , ecoli-Z2445 , ecoli-YfhR

Title : Complete DNA sequence of a ColBM plasmid from avian pathogenic Escherichia coli suggests that it evolved from closely related ColV virulence plasmids - Johnson_2006_J.Bacteriol_188_5975
Author(s) : Johnson TJ , Johnson SJ , Nolan LK
Ref : Journal of Bacteriology , 188 :5975 , 2006
Abstract :
PubMedSearch : Johnson_2006_J.Bacteriol_188_5975
PubMedID: 16885466
Gene_locus related to this paper: ecoli-IROD , ecoli-IROE , ecoli-ypt1

Title : Nucleotide sequence analysis of the enteropathogenic Escherichia coli adherence factor plasmid pMAR7 - Brinkley_2006_Infect.Immun_74_5408
Author(s) : Brinkley C , Burland V , Keller R , Rose DJ , Boutin AT , Klink SA , Blattner FR , Kaper JB
Ref : Infect Immun , 74 :5408 , 2006
Abstract :
PubMedSearch : Brinkley_2006_Infect.Immun_74_5408
PubMedID: 16926437
Gene_locus related to this paper: ecoli-ypt1

Title : Complete sequence of the large virulence plasmid pSFO157 of the sorbitol-fermenting enterohemorrhagic Escherichia coli O157:H- strain 3072\/96 - Brunder_2006_Int.J.Med.Microbiol_296_467
Author(s) : Brunder W , Karch H , Schmidt H
Ref : Int J Med Microbiol , 296 :467 , 2006
Abstract :
PubMedSearch : Brunder_2006_Int.J.Med.Microbiol_296_467
PubMedID: 16887390
Gene_locus related to this paper: ecoli-ypt1

Title : Identification of genes subject to positive selection in uropathogenic strains of Escherichia coli: a comparative genomics approach - Chen_2006_Proc.Natl.Acad.Sci.U.S.A_103_5977
Author(s) : Chen SL , Hung CS , Xu J , Reigstad CS , Magrini V , Sabo A , Blasiar D , Bieri T , Meyer RR , Ozersky P , Armstrong JR , Fulton RS , Latreille JP , Spieth J , Hooton TM , Mardis ER , Hultgren SJ , Gordon JI
Ref : Proc Natl Acad Sci U S A , 103 :5977 , 2006
Abstract :
PubMedSearch : Chen_2006_Proc.Natl.Acad.Sci.U.S.A_103_5977
PubMedID: 16585510
Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C0410 , ecoli-C2429 , ecoli-C2451 , ecoli-C4836 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-IROD , ecoli-IROE , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-ypt1 , ecoli-yqia , ecoli-YfhR , ecout-q1r7l6 , yerpe-YBTT

Title : Complete nucleotide sequence of a 92-kilobase plasmid harboring the CTX-M-15 extended-spectrum beta-lactamase involved in an outbreak in long-term-care facilities in Toronto, Canada - Boyd_2004_Antimicrob.Agents.Chemother_48_3758
Author(s) : Boyd DA , Tyler S , Christianson S , McGeer A , Muller MP , Willey BM , Bryce E , Gardam M , Nordmann P , Mulvey MR
Ref : Antimicrobial Agents & Chemotherapy , 48 :3758 , 2004
Abstract :
PubMedSearch : Boyd_2004_Antimicrob.Agents.Chemother_48_3758
PubMedID: 15388431
Gene_locus related to this paper: ecoli-ypt1

Title : Novel type of fimbriae encoded by the large plasmid of sorbitol-fermenting enterohemorrhagic Escherichia coli O157:H(-) - Brunder_2001_Infect.Immun_69_4447
Author(s) : Brunder W , Khan AS , Hacker J , Karch H
Ref : Infect Immun , 69 :4447 , 2001
Abstract :
PubMedSearch : Brunder_2001_Infect.Immun_69_4447
PubMedID: 11401985
Gene_locus related to this paper: ecoli-ypt1

Title : Complete nucleotide sequences of 93-kb and 3.3-kb plasmids of an enterohemorrhagic Escherichia coli O157:H7 derived from Sakai outbreak - Makino_1998_DNA.Res_5_1
Author(s) : Makino K , Ishii K , Yasunaga T , Hattori M , Yokoyama K , Yutsudo CH , Kubota Y , Yamaichi Y , Iida T , Yamamoto K , Honda T , Han CG , Ohtsubo E , Kasamatsu M , Hayashi T , Kuhara S , Shinagawa H
Ref : DNA Research , 5 :1 , 1998
Abstract :
PubMedSearch : Makino_1998_DNA.Res_5_1
PubMedID: 9628576
Gene_locus related to this paper: ecoli-ypt1

Title : The complete DNA sequence and analysis of the large virulence plasmid of Escherichia coli O157:H7 - Burland_1998_Nucleic.Acids.Res_26_4196
Author(s) : Burland V , Shao Y , Perna NT , Plunkett G , Sofia HJ , Blattner FR
Ref : Nucleic Acids Research , 26 :4196 , 1998
Abstract :
PubMedSearch : Burland_1998_Nucleic.Acids.Res_26_4196
PubMedID: 9722640
Gene_locus related to this paper: ecoli-ypt1

Title : Sequence and conservation of genes at the distal end of the transfer region on plasmids F and R6-5 - Cram_1991_Gene_104_85
Author(s) : Cram DS , Loh SM , Cheah KC , Skurray RA
Ref : Gene , 104 :85 , 1991
Abstract :
PubMedSearch : Cram_1991_Gene_104_85
PubMedID: 1916281
Gene_locus related to this paper: ecoli-ypt1

Title : Nucleotide sequence of the promoter-distal region of the tra operon of plasmid R100, including traI (DNA helicase I) and traD genes - Yoshioka_1990_J.Mol.Biol_214_39
Author(s) : Yoshioka Y , Fujita Y , Ohtsubo E
Ref : Journal of Molecular Biology , 214 :39 , 1990
Abstract :
PubMedSearch : Yoshioka_1990_J.Mol.Biol_214_39
PubMedID: 2164585
Gene_locus related to this paper: ecoli-ypt1