Escherichia coli, Escherichia albertii, S-formylglutathione hydrolase frmB
There are more than 1000 strains. Other Uniprot entries and list of strains can be found with the link: Other strains
Family : A85-EsteraseD-FGH
Block : X
Position in NCBI Life Tree : Escherichia coli
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms N E > Bacteria N E > Proteobacteria N E > Gammaproteobacteria N E > Enterobacterales N E > Enterobacteriaceae N E > Escherichia N E > Escherichia coli N EMELIEKHVSF GGWQNMYRHY SQSLKCEMNV GVYLPPKAAN EKLPVLYWLS GLTCNEQNFI TKSGMQRYAA EHNIIVVAPD TSPRGSHVAD ADRYDLGQGA GFYLNATQAP WNEHYKMYDY IRNELPDLVM HHFPATAKKS ISGHSMGGLG ALVLALRNPD EYVSVSAFSP IVSPSQVPWG QQAFAAYLAE NKDAWLDYDP VSLISQGQRV AEIMVDQGLS DDFYAEQLRT PNLEKICQEM NIKTLIRYHE GYDHSYYFVS SFIGEHIAYH ANKLNMR
| Title : Complete Genome Sequences of Two Escherichia coli O145:H28 Outbreak Strains of Food Origin - Cooper_2014_Genome.Announc_2_e00482 |
| Author(s) : Cooper KK , Mandrell RE , Louie JW , Korlach J , Clark TA , Parker CT , Huynh S , Chain PS , Ahmed S , Carter MQ |
| Ref : Genome Announc , 2 :e00482 , 2014 |
| Abstract : |
| PubMedSearch : Cooper_2014_Genome.Announc_2_e00482 |
| PubMedID: 24855308 |
| Gene_locus related to this paper: ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ypt1 , ecoli-yqia , ecoli-Z1341 |
| Title : Escherichia coli isolate for studying colonization of the mouse intestine and its application to two-component signaling knockouts - Lasaro_2014_J.Bacteriol_196_1723 |
| Author(s) : Lasaro M , Liu Z , Bishar R , Kelly K , Chattopadhyay S , Paul S , Sokurenko E , Zhu J , Goulian M |
| Ref : Journal of Bacteriology , 196 :1723 , 2014 |
| Abstract : |
| PubMedSearch : Lasaro_2014_J.Bacteriol_196_1723 |
| PubMedID: 24563035 |
| Gene_locus related to this paper: ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-yqia , ecoli-YfhR |
| Title : Genome Sequence of Enterotoxigenic Escherichia coli Strain B2C - Madhavan_2014_Genome.Announc_2_e00247 |
| Author(s) : Madhavan TP , Steen JA , Hugenholtz P , Sakellaris H |
| Ref : Genome Announc , 2 :e00247 , 2014 |
| Abstract : |
| PubMedSearch : Madhavan_2014_Genome.Announc_2_e00247 |
| PubMedID: 24723709 |
| Gene_locus related to this paper: ecoli-fes , ecoli-yaim , ecoli-ycfp , ecoli-ypt1 , ecoli-yqia , ecoli-YfhR |
| Title : Complete Genome Sequences of Nitrofurantoin-Sensitive and -Resistant Escherichia coli ST540 and ST2747 Strains - Xavier_2014_Genome.Announc_2_e00239 |
| Author(s) : Xavier BB , Vervoort J , Stewardson A , Adriaenssens N , Coenen S , Harbarth S , Goossens H , Malhotra-Kumar S |
| Ref : Genome Announc , 2 : , 2014 |
| Abstract : |
| PubMedSearch : Xavier_2014_Genome.Announc_2_e00239 |
| PubMedID: 24723707 |
| Gene_locus related to this paper: ecoli-fes , ecoli-yaim , ecoli-ycfp , ecoli-yiel |
| Title : Comparative genomics of enterohemorrhagic Escherichia coli O145:H28 demonstrates a common evolutionary lineage with Escherichia coli O157:H7 - Cooper_2014_BMC.Genomics_15_17 |
| Author(s) : Cooper KK , Mandrell RE , Louie JW , Korlach J , Clark TA , Parker CT , Huynh S , Chain PS , Ahmed S , Carter MQ |
| Ref : BMC Genomics , 15 :17 , 2014 |
| Abstract : |
| PubMedSearch : Cooper_2014_BMC.Genomics_15_17 |
| PubMedID: 24410921 |
| Gene_locus related to this paper: ecoli-fes , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ypt1 , ecoli-yqia , ecoli-Z1341 , ecoli-Z1930 , ecoli-YfhR |
| Title : Polyamine transporters and polyamines increase furfural tolerance during xylose fermentation with ethanologenic Escherichia coli strain LY180 - Geddes_2014_Appl.Environ.Microbiol_80_5955 |
| Author(s) : Geddes RD , Wang X , Yomano LP , Miller EN , Zheng H , Shanmugam KT , Ingram LO |
| Ref : Applied Environmental Microbiology , 80 :5955 , 2014 |
| Abstract : |
| PubMedSearch : Geddes_2014_Appl.Environ.Microbiol_80_5955 |
| PubMedID: 25063650 |
| Gene_locus related to this paper: ecoli-fes , ecoli-yaim , ecoli-YfhR |
| Title : Draft Genome Sequences of Extended-Spectrum beta-Lactamase-Producing Escherichia coli Strains Isolated from Patients in Lebanon - Tokajian_2014_Genome.Announc_2_e00123 |
| Author(s) : Tokajian S , Eisen JA , Jospin G , Farra A , Coil DA |
| Ref : Genome Announc , 2 : , 2014 |
| Abstract : |
| PubMedSearch : Tokajian_2014_Genome.Announc_2_e00123 |
| PubMedID: 24558252 |
| Gene_locus related to this paper: ecoli-IROD , ecoli-IROE , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-yqia , ecoli-YfhR , ecolx-f4suw9 , ecolx-g0dan0 |
| Title : Genomics of rapid adaptation to antibiotics: convergent evolution and scalable sequence amplification - Laehnemann_2014_Genome.Biol.Evol_6_1287 |
| Author(s) : Laehnemann D , Pena-Miller R , Rosenstiel P , Beardmore R , Jansen G , Schulenburg H |
| Ref : Genome Biol Evol , 6 :1287 , 2014 |
| Abstract : |
| PubMedSearch : Laehnemann_2014_Genome.Biol.Evol_6_1287 |
| PubMedID: 24850796 |
| Gene_locus related to this paper: ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-yhet , ecoli-yiel , ecoli-yqia , ecoli-YfhR |
| Title : Sequencing and functional annotation of avian pathogenic Escherichia coli serogroup O78 strains reveal the evolution of E. coli lineages pathogenic for poultry via distinct mechanisms - Dziva_2013_Infect.Immun_81_838 |
| Author(s) : Dziva F , Hauser H , Connor TR , van Diemen PM , Prescott G , Langridge GC , Eckert S , Chaudhuri RR , Ewers C , Mellata M , Mukhopadhyay S , Curtiss R, 3rd , Dougan G , Wieler LH , Thomson NR , Pickard DJ , Stevens MP |
| Ref : Infect Immun , 81 :838 , 2013 |
| Abstract : |
| PubMedSearch : Dziva_2013_Infect.Immun_81_838 |
| PubMedID: 23275093 |
| Gene_locus related to this paper: ecoli-yaim , ecoli-ycfp , ecoli-yqia , ecoli-Z1930 |
| Title : Draft Genome Sequence of an Escherichia coli O157:H43 Strain Isolated from Cattle - Svab_2013_Genome.Announc_1_E00263 |
| Author(s) : Svab D , Horvath B , Szucs A , Maroti G , Toth I |
| Ref : Genome Announc , 1 : , 2013 |
| Abstract : |
| PubMedSearch : Svab_2013_Genome.Announc_1_E00263 |
| PubMedID: 23723396 |
| Gene_locus related to this paper: ecoli-yaim , ecoli-ycfp , ecoli-yhet , ecoli-ypt1 , ecoli-yqia , ecoli-yuar , ecoli-Z1930 |
| Title : Complete Genome Sequence of the Epidemic and Highly Virulent CTX-M-15-Producing H30-Rx Subclone of Escherichia coli ST131 - Andersen_2013_Genome.Announc_1_e00988 |
| Author(s) : Andersen PS , Stegger M , Aziz M , Contente-Cuomo T , Gibbons HS , Keim P , Sokurenko EV , Johnson JR , Price LB |
| Ref : Genome Announc , 1 :e00988 , 2013 |
| Abstract : |
| PubMedSearch : Andersen_2013_Genome.Announc_1_e00988 |
| PubMedID: 24309736 |
| Gene_locus related to this paper: ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-yiel , ecoli-ypt1 , ecoli-yqia , ecoli-YfhR , ecolx-f4suw9 , ecolx-g0dan0 |
| Title : Draft Genome Sequence of Uropathogenic Escherichia coli Strain J96 - Klein_2013_Genome.Announc_1_E00245 |
| Author(s) : Klein EA , Gitai Z |
| Ref : Genome Announc , 1 : , 2013 |
| Abstract : |
| PubMedSearch : Klein_2013_Genome.Announc_1_E00245 |
| PubMedID: 23469357 |
| Gene_locus related to this paper: ecoli-IROD , ecoli-IROE , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-yqia |
| Title : Adaptive mutations and replacements of virulence traits in the Escherichia coli O104:H4 outbreak population - Guy_2013_PLoS.One_8_e63027 |
| Author(s) : Guy L , Jernberg C , Arven Norling J , Ivarsson S , Hedenstrom I , Melefors O , Liljedahl U , Engstrand L , Andersson SG |
| Ref : PLoS ONE , 8 :e63027 , 2013 |
| Abstract : |
| PubMedSearch : Guy_2013_PLoS.One_8_e63027 |
| PubMedID: 23675451 |
| Gene_locus related to this paper: ecoli-MCMK , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-yhet , ecoli-yiel , ecoli-yqia |
| Title : Genome Sequences of Avian Pathogenic Escherichia coli Strains Isolated from Brazilian Commercial Poultry - Rojas_2013_Genome.Announc_1_e0011013 |
| Author(s) : Rojas TC , Maluta RP , Parizzi LP , Koenigkan LV , Yang J , Yu J , Pereira GA , Dias da Silveira W |
| Ref : Genome Announc , 1 :e0011013 , 2013 |
| Abstract : |
| PubMedSearch : Rojas_2013_Genome.Announc_1_e0011013 |
| PubMedID: 23516222 |
| Gene_locus related to this paper: ecoli-d7xp23 , ecoli-IROD , ecoli-IROE , ecoli-estX , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-yiel , ecoli-ypt1 , ecoli-yqia , ecoli-Z1930 , ecoli-YfhR |
| Title : Genome analysis of bovine-mastitis-associated Escherichia coli O32:H37 strain P4 - Blum_2012_J.Bacteriol_194_3732 |
| Author(s) : Blum S , Sela N , Heller ED , Sela S , Leitner G |
| Ref : Journal of Bacteriology , 194 :3732 , 2012 |
| Abstract : |
| PubMedSearch : Blum_2012_J.Bacteriol_194_3732 |
| PubMedID: 22740662 |
| Gene_locus related to this paper: ecoli-yaim , ecoli-ybff , ecoli-yqia , ecoli-yuar , ecoli-Z1930 , ecoli-YfhR |
| Title : Genome sequences and phylogenetic analysis of K88- and F18-positive porcine enterotoxigenic Escherichia coli - Shepard_2012_J.Bacteriol_194_395 |
| Author(s) : Shepard SM , Danzeisen JL , Isaacson RE , Seemann T , Achtman M , Johnson TJ |
| Ref : Journal of Bacteriology , 194 :395 , 2012 |
| Abstract : |
| PubMedSearch : Shepard_2012_J.Bacteriol_194_395 |
| PubMedID: 22081385 |
| Gene_locus related to this paper: ecoli-fes , ecoli-estX , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-YFBB , ecoli-yqia , ecoli-YfhR |
| Title : Genome sequence of Escherichia coli J53, a reference strain for genetic studies - Yi_2012_J.Bacteriol_194_3742 |
| Author(s) : Yi H , Cho YJ , Yong D , Chun J |
| Ref : Journal of Bacteriology , 194 :3742 , 2012 |
| Abstract : |
| PubMedSearch : Yi_2012_J.Bacteriol_194_3742 |
| PubMedID: 22740669 |
| Gene_locus related to this paper: ecoli-fes , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-yiel |
| Title : Genomic epidemiology of the Escherichia coli O104:H4 outbreaks in Europe, 2011 - Grad_2012_Proc.Natl.Acad.Sci.U.S.A_109_3065 |
| Author(s) : Grad YH , Lipsitch M , Feldgarden M , Arachchi HM , Cerqueira GC , FitzGerald M , Godfrey P , Haas BJ , Murphy CI , Russ C , Sykes S , Walker BJ , Wortman JR , Young S , Zeng Q , Abouelleil A , Bochicchio J , Chauvin S , Desmet T , Gujja S , McCowan C , Montmayeur A , Steelman S , Frimodt-Moller J , Petersen AM , Struve C , Krogfelt KA , Bingen E , Weill FX , Lander ES , Nusbaum C , Birren BW , Hung DT , Hanage WP |
| Ref : Proc Natl Acad Sci U S A , 109 :3065 , 2012 |
| Abstract : |
| PubMedSearch : Grad_2012_Proc.Natl.Acad.Sci.U.S.A_109_3065 |
| PubMedID: 22315421 |
| Gene_locus related to this paper: ecoli-fes , ecoli-MCMK , ecoli-yaim , ecoli-ycfp , ecoli-YFBB , ecoli-yhet , ecoli-yiel , ecoli-yqia , ecoli-YfhR |
| Title : Draft Genome sequence of Escherichia coli AI27, a porcine isolate belonging to phylogenetic group B1 - Lee_2012_J.Bacteriol_194_6640 |
| Author(s) : Lee K , Yi H , Cho YJ , Jang J , Hur HG , Chun J |
| Ref : Journal of Bacteriology , 194 :6640 , 2012 |
| Abstract : |
| PubMedSearch : Lee_2012_J.Bacteriol_194_6640 |
| PubMedID: 23144394 |
| Gene_locus related to this paper: ecoli-IROD , ecoli-yaim , ecoli-ycfp , ecoli-ypt1 , ecoli-yqia , ecoli-YfhR |
| Title : Optical mapping and sequencing of the Escherichia coli KO11 genome reveal extensive chromosomal rearrangements, and multiple tandem copies of the Zymomonas mobilis pdc and adhB genes - Turner_2012_J.Ind.Microbiol.Biotechnol_39_629 |
| Author(s) : Turner PC , Yomano LP , Jarboe LR , York SW , Baggett CL , Moritz BE , Zentz EB , Shanmugam KT , Ingram LO |
| Ref : J Ind Microbiol Biotechnol , 39 :629 , 2012 |
| Abstract : |
| PubMedSearch : Turner_2012_J.Ind.Microbiol.Biotechnol_39_629 |
| PubMedID: 22075923 |
| Gene_locus related to this paper: ecoli-rutD , ecoli-bioh , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-yeiG , ecoli-yhet , ecoli-yiel , ecoli-yqia , ecoli-YfhR |
| Title : Draft genome sequences of the diarrheagenic Escherichia coli collection - Hazen_2012_J.Bacteriol_194_3026 |
| Author(s) : Hazen TH , Sahl JW , Redman JC , Morris CR , Daugherty SC , Chibucos MC , Sengamalay NA , Fraser-Liggett CM , Steinsland H , Whittam TS , Whittam B , Manning SD , Rasko DA |
| Ref : Journal of Bacteriology , 194 :3026 , 2012 |
| Abstract : |
| PubMedSearch : Hazen_2012_J.Bacteriol_194_3026 |
| PubMedID: 22582382 |
| Gene_locus related to this paper: ecoli-d7xp23 , ecoli-fes , ecoli-MCMK , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-YFBB , ecoli-yhet , ecoli-yiel , ecoli-ypt1 , ecoli-yqia , ecoli-Z1341 , ecoli-Z1930 , ecoli-YfhR |
| Title : Phylogenetic analysis of non-O157 Shiga toxin-producing Escherichia coli strains by whole-genome sequencing - Ju_2012_J.Clin.Microbiol_50_4123 |
| Author(s) : Ju W , Cao G , Rump L , Strain E , Luo Y , Timme R , Allard M , Zhao S , Brown E , Meng J |
| Ref : J Clin Microbiol , 50 :4123 , 2012 |
| Abstract : |
| PubMedSearch : Ju_2012_J.Clin.Microbiol_50_4123 |
| PubMedID: 23052305 |
| Gene_locus related to this paper: ecoli-d7xp23 , ecoli-MCMK , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-yhet , ecoli-yiel , ecoli-ypt1 , ecoli-yqia , ecoli-Z1341 , ecoli-Z1930 , ecoli-YfhR |
| Title : A novel non-homologous recombination-mediated mechanism for Escherichia coli unilateral flagellar phase variation - Liu_2012_Nucleic.Acids.Res_40_4530 |
| Author(s) : Liu B , Hu B , Zhou Z , Guo D , Guo X , Ding P , Feng L , Wang L |
| Ref : Nucleic Acids Research , 40 :4530 , 2012 |
| Abstract : |
| PubMedSearch : Liu_2012_Nucleic.Acids.Res_40_4530 |
| PubMedID: 22287625 |
| Gene_locus related to this paper: ecoli-yaim , ecoli-ybff , ecoli-yqia , ecoli-YfhR |
| Title : Genome of multidrug-resistant uropathogenic Escherichia coli strain NA114 from India - Avasthi_2011_J.Bacteriol_193_4272 |
| Author(s) : Avasthi TS , Kumar N , Baddam R , Hussain A , Nandanwar N , Jadhav S , Ahmed N |
| Ref : Journal of Bacteriology , 193 :4272 , 2011 |
| Abstract : |
| PubMedSearch : Avasthi_2011_J.Bacteriol_193_4272 |
| PubMedID: 21685291 |
| Gene_locus related to this paper: ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-YFBB , ecoli-yiel , ecoli-yqia , ecoli-YfhR , ecolx-f4suw9 , ecolx-g0dan0 |
| Title : Insights into a multidrug resistant Escherichia coli pathogen of the globally disseminated ST131 lineage: genome analysis and virulence mechanisms - Totsika_2011_PLoS.One_6_e26578 |
| Author(s) : Totsika M , Beatson SA , Sarkar S , Phan MD , Petty NK , Bachmann N , Szubert M , Sidjabat HE , Paterson DL , Upton M , Schembri MA |
| Ref : PLoS ONE , 6 :e26578 , 2011 |
| Abstract : |
| PubMedSearch : Totsika_2011_PLoS.One_6_e26578 |
| PubMedID: 22053197 |
| Gene_locus related to this paper: ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-yqia , ecolx-f4suw9 , ecolx-g0dan0 |
| Title : Origins of the E. coli strain causing an outbreak of hemolytic-uremic syndrome in Germany - Rasko_2011_N.Engl.J.Med_365_709 |
| Author(s) : Rasko DA , Webster DR , Sahl JW , Bashir A , Boisen N , Scheutz F , Paxinos EE , Sebra R , Chin CS , Iliopoulos D , Klammer A , Peluso P , Lee L , Kislyuk AO , Bullard J , Kasarskis A , Wang S , Eid J , Rank D , Redman JC , Steyert SR , Frimodt-Moller J , Struve C , Petersen AM , Krogfelt KA , Nataro JP , Schadt EE , Waldor MK |
| Ref : N Engl J Med , 365 :709 , 2011 |
| Abstract : |
| PubMedSearch : Rasko_2011_N.Engl.J.Med_365_709 |
| PubMedID: 21793740 |
| Gene_locus related to this paper: ecoli-fes , ecoli-MCMK , ecoli-yaim , ecoli-ycfp , ecoli-YFBB , ecoli-yiel , ecoli-yqia |
| Title : Complete genome sequence of adherent invasive Escherichia coli UM146 isolated from Ileal Crohn's disease biopsy tissue - Krause_2011_J.Bacteriol_193_583 |
| Author(s) : Krause DO , Little AC , Dowd SE , Bernstein CN |
| Ref : Journal of Bacteriology , 193 :583 , 2011 |
| Abstract : |
| PubMedSearch : Krause_2011_J.Bacteriol_193_583 |
| PubMedID: 21075930 |
| Gene_locus related to this paper: ecoli-rutD , ecoli-bioh , ecoli-C4836 , ecoli-entf , ecoli-IROD , ecoli-IROE , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-yeiG , ecoli-YFBB , ecoli-yiel , ecoli-yqia , ecoli-YfhR , ecout-q1r7l6 |
| Title : Derivation of Escherichia coli O157:H7 from its O55:H7 precursor - Zhou_2010_PLoS.One_5_e8700 |
| Author(s) : Zhou Z , Li X , Liu B , Beutin L , Xu J , Ren Y , Feng L , Lan R , Reeves PR , Wang L |
| Ref : PLoS ONE , 5 :e8700 , 2010 |
| Abstract : |
| PubMedSearch : Zhou_2010_PLoS.One_5_e8700 |
| PubMedID: 20090843 |
| Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C0410 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-yqia , ecoli-Z0347 , ecoli-Z1930 , ecoli-Z2445 , ecoli-YfhR |
| Title : Complete genome sequence of the wild-type commensal Escherichia coli strain SE15, belonging to phylogenetic group B2 - Toh_2010_J.Bacteriol_192_1165 |
| Author(s) : Toh H , Oshima K , Toyoda A , Ogura Y , Ooka T , Sasamoto H , Park SH , Iyoda S , Kurokawa K , Morita H , Itoh K , Taylor TD , Hayashi T , Hattori M |
| Ref : Journal of Bacteriology , 192 :1165 , 2010 |
| Abstract : |
| PubMedSearch : Toh_2010_J.Bacteriol_192_1165 |
| PubMedID: 20008064 |
| Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C0410 , ecoli-C2429 , ecoli-C4836 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-ypfh , ecoli-ypt1 , ecoli-yqia , ecoli-YfhR , ecos5-d2nhh3 , yerpe-YBTT , ecolx-f4suw9 |
| Title : Complete genome sequence and comparative metabolic profiling of the prototypical enteroaggregative Escherichia coli strain 042 - Chaudhuri_2010_PLoS.One_5_e8801 |
| Author(s) : Chaudhuri RR , Sebaihia M , Hobman JL , Webber MA , Leyton DL , Goldberg MD , Cunningham AF , Scott-Tucker A , Ferguson PR , Thomas CM , Frankel G , Tang CM , Dudley EG , Roberts IS , Rasko DA , Pallen MJ , Parkhill J , Nataro JP , Thomson NR , Henderson IR |
| Ref : PLoS ONE , 5 :e8801 , 2010 |
| Abstract : |
| PubMedSearch : Chaudhuri_2010_PLoS.One_5_e8801 |
| PubMedID: 20098708 |
| Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C0410 , ecoli-C2429 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-MCMK , ecoli-mhpc , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yhet , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-yqia , ecoli-Z0347 , ecoli-YfhR , yerpe-YBTT |
| Title : A commensal gone bad: complete genome sequence of the prototypical enterotoxigenic Escherichia coli strain H10407 - Crossman_2010_J.Bacteriol_192_5822 |
| Author(s) : Crossman LC , Chaudhuri RR , Beatson SA , Wells TJ , Desvaux M , Cunningham AF , Petty NK , Mahon V , Brinkley C , Hobman JL , Savarino SJ , Turner SM , Pallen MJ , Penn CW , Parkhill J , Turner AK , Johnson TJ , Thomson NR , Smith SG , Henderson IR |
| Ref : Journal of Bacteriology , 192 :5822 , 2010 |
| Abstract : |
| PubMedSearch : Crossman_2010_J.Bacteriol_192_5822 |
| PubMedID: 20802035 |
| Gene_locus related to this paper: ecoli-rutD , ecoli-bioh , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-yeiG , ecoli-YFBB , ecoli-yiel , ecoli-yqia |
| Title : Genome sequences of Escherichia coli B strains REL606 and BL21(DE3) - Jeong_2009_J.Mol.Biol_394_644 |
| Author(s) : Jeong H , Barbe V , Lee CH , Vallenet D , Yu DS , Choi SH , Couloux A , Lee SW , Yoon SH , Cattolico L , Hur CG , Park HS , Segurens B , Kim SC , Oh TK , Lenski RE , Studier FW , Daegelen P , Kim JF |
| Ref : Journal of Molecular Biology , 394 :644 , 2009 |
| Abstract : |
| PubMedSearch : Jeong_2009_J.Mol.Biol_394_644 |
| PubMedID: 19786035 |
| Gene_locus related to this paper: eco57-b3a913 , ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-yqia , ecoli-YfhR |
| Title : Comparative genomics reveal the mechanism of the parallel evolution of O157 and non-O157 enterohemorrhagic Escherichia coli - Ogura_2009_Proc.Natl.Acad.Sci.U.S.A_106_17939 |
| Author(s) : Ogura Y , Ooka T , Iguchi A , Toh H , Asadulghani M , Oshima K , Kodama T , Abe H , Nakayama K , Kurokawa K , Tobe T , Hattori M , Hayashi T |
| Ref : Proc Natl Acad Sci U S A , 106 :17939 , 2009 |
| Abstract : |
| PubMedSearch : Ogura_2009_Proc.Natl.Acad.Sci.U.S.A_106_17939 |
| PubMedID: 19815525 |
| Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C2429 , ecoli-C4836 , ecoli-d7xp23 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-ypt1 , ecoli-yqia , ecoli-Z1341 , ecoli-Z1930 , ecoli-Z2445 , ecoli-YfhR , yerpe-YBTT |
| Title : A precise reconstruction of the emergence and constrained radiations of Escherichia coli O157 portrayed by backbone concatenomic analysis - Leopold_2009_Proc.Natl.Acad.Sci.U.S.A_106_8713 |
| Author(s) : Leopold SR , Magrini V , Holt NJ , Shaikh N , Mardis ER , Cagno J , Ogura Y , Iguchi A , Hayashi T , Mellmann A , Karch H , Besser TE , Sawyer SA , Whittam TS , Tarr PI |
| Ref : Proc Natl Acad Sci U S A , 106 :8713 , 2009 |
| Abstract : |
| PubMedSearch : Leopold_2009_Proc.Natl.Acad.Sci.U.S.A_106_8713 |
| PubMedID: 19439656 |
| Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-yqia , ecoli-YfhR , neucr-q7sha3 |
| Title : Complete genome sequence and comparative genome analysis of enteropathogenic Escherichia coli O127:H6 strain E2348\/69 - Iguchi_2009_J.Bacteriol_191_347 |
| Author(s) : Iguchi A , Thomson NR , Ogura Y , Saunders D , Ooka T , Henderson IR , Harris D , Asadulghani M , Kurokawa K , Dean P , Kenny B , Quail MA , Thurston S , Dougan G , Hayashi T , Parkhill J , Frankel G |
| Ref : Journal of Bacteriology , 191 :347 , 2009 |
| Abstract : |
| PubMedSearch : Iguchi_2009_J.Bacteriol_191_347 |
| PubMedID: 18952797 |
| Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C0410 , ecoli-C4836 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-ypfh , ecoli-ypt1 , ecoli-yqia , ecoli-YfhR |
| Title : Genomic sequencing reveals regulatory mutations and recombinational events in the widely used MC4100 lineage of Escherichia coli K-12 - Ferenci_2009_J.Bacteriol_191_4025 |
| Author(s) : Ferenci T , Zhou Z , Betteridge T , Ren Y , Liu Y , Feng L , Reeves PR , Wang L |
| Ref : Journal of Bacteriology , 191 :4025 , 2009 |
| Abstract : |
| PubMedSearch : Ferenci_2009_J.Bacteriol_191_4025 |
| PubMedID: 19376874 |
| Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-yqia , ecoli-YfhR |
| Title : The pangenome structure of Escherichia coli: comparative genomic analysis of E. coli commensal and pathogenic isolates - Rasko_2008_J.Bacteriol_190_6881 |
| Author(s) : Rasko DA , Rosovitz MJ , Myers GS , Mongodin EF , Fricke WF , Gajer P , Crabtree J , Sebaihia M , Thomson NR , Chaudhuri R , Henderson IR , Sperandio V , Ravel J |
| Ref : Journal of Bacteriology , 190 :6881 , 2008 |
| Abstract : |
| PubMedSearch : Rasko_2008_J.Bacteriol_190_6881 |
| PubMedID: 18676672 |
| Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C4836 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-ypt1 , ecoli-yqia , ecoli-Z2445 , ecoli-YfhR |
| Title : The complete genome sequence of Escherichia coli DH10B: insights into the biology of a laboratory workhorse - Durfee_2008_J.Bacteriol_190_2597 |
| Author(s) : Durfee T , Nelson R , Baldwin S , Plunkett G, 3rd , Burland V , Mau B , Petrosino JF , Qin X , Muzny DM , Ayele M , Gibbs RA , Csorgo B , Posfai G , Weinstock GM , Blattner FR |
| Ref : Journal of Bacteriology , 190 :2597 , 2008 |
| Abstract : |
| PubMedSearch : Durfee_2008_J.Bacteriol_190_2597 |
| PubMedID: 18245285 |
| Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-yqia , ecoli-YfhR |
| Title : Complete genome sequence and comparative analysis of the wild-type commensal Escherichia coli strain SE11 isolated from a healthy adult - Oshima_2008_DNA.Res_15_375 |
| Author(s) : Oshima K , Toh H , Ogura Y , Sasamoto H , Morita H , Park SH , Ooka T , Iyoda S , Taylor TD , Hayashi T , Itoh K , Hattori M |
| Ref : DNA Research , 15 :375 , 2008 |
| Abstract : |
| PubMedSearch : Oshima_2008_DNA.Res_15_375 |
| PubMedID: 18931093 |
| Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C4836 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-yqia , ecoli-Z1930 , ecoli-Z2445 , ecoli-YfhR |
| Title : Insights into the environmental resistance gene pool from the genome sequence of the multidrug-resistant environmental isolate Escherichia coli SMS-3-5 - Fricke_2008_J.Bacteriol_190_6779 |
| Author(s) : Fricke WF , Wright MS , Lindell AH , Harkins DM , Baker-Austin C , Ravel J , Stepanauskas R |
| Ref : Journal of Bacteriology , 190 :6779 , 2008 |
| Abstract : |
| PubMedSearch : Fricke_2008_J.Bacteriol_190_6779 |
| PubMedID: 18708504 |
| Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C0410 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-pldb , ecoli-ptrb , ecoli-estX , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-yqia , ecoli-YfhR , ecosm-b1lhu2 |
| Title : The genome sequence of avian pathogenic Escherichia coli strain O1:K1:H7 shares strong similarities with human extraintestinal pathogenic E. coli genomes - Johnson_2007_J.Bacteriol_189_3228 |
| Author(s) : Johnson TJ , Kariyawasam S , Wannemuehler Y , Mangiamele P , Johnson SJ , Doetkott C , Skyberg JA , Lynne AM , Johnson JR , Nolan LK |
| Ref : Journal of Bacteriology , 189 :3228 , 2007 |
| Abstract : |
| PubMedSearch : Johnson_2007_J.Bacteriol_189_3228 |
| PubMedID: 17293413 |
| Gene_locus related to this paper: ecok1-a1acc0 , ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C0410 , ecoli-C2429 , ecoli-C4836 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-yqia , ecoli-Z1930 , ecoli-YfhR , ecout-q1r7l6 , yerpe-YBTT |
| Title : Identification of genes subject to positive selection in uropathogenic strains of Escherichia coli: a comparative genomics approach - Chen_2006_Proc.Natl.Acad.Sci.U.S.A_103_5977 |
| Author(s) : Chen SL , Hung CS , Xu J , Reigstad CS , Magrini V , Sabo A , Blasiar D , Bieri T , Meyer RR , Ozersky P , Armstrong JR , Fulton RS , Latreille JP , Spieth J , Hooton TM , Mardis ER , Hultgren SJ , Gordon JI |
| Ref : Proc Natl Acad Sci U S A , 103 :5977 , 2006 |
| Abstract : |
| PubMedSearch : Chen_2006_Proc.Natl.Acad.Sci.U.S.A_103_5977 |
| PubMedID: 16585510 |
| Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C0410 , ecoli-C2429 , ecoli-C2451 , ecoli-C4836 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-IROD , ecoli-IROE , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-ypt1 , ecoli-yqia , ecoli-YfhR , ecout-q1r7l6 , yerpe-YBTT |
| Title : Role of pathogenicity island-associated integrases in the genome plasticity of uropathogenic Escherichia coli strain 536 - Hochhut_2006_Mol.Microbiol_61_584 |
| Author(s) : Hochhut B , Wilde C , Balling G , Middendorf B , Dobrindt U , Brzuszkiewicz E , Gottschalk G , Carniel E , Hacker J |
| Ref : Molecular Microbiology , 61 :584 , 2006 |
| Abstract : |
| PubMedSearch : Hochhut_2006_Mol.Microbiol_61_584 |
| PubMedID: 16879640 |
| Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C0410 , ecoli-C2429 , ecoli-C2451 , ecoli-C4836 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-IROD , ecoli-IROE , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-yqia , ecoli-YfhR , ecolx-q707d7 , yerpe-YBTT |
| Title : Molecular basis of formaldehyde detoxification. Characterization of two S-formylglutathione hydrolases from Escherichia coli, FrmB and YeiG - Gonzalez_2006_J.Biol.Chem_281_14514 |
| Author(s) : Gonzalez CF , Proudfoot M , Brown G , Korniyenko Y , Mori H , Savchenko AV , Yakunin AF |
| Ref : Journal of Biological Chemistry , 281 :14514 , 2006 |
| Abstract : |
| PubMedSearch : Gonzalez_2006_J.Biol.Chem_281_14514 |
| PubMedID: 16567800 |
| Gene_locus related to this paper: ecoli-yaim , ecoli-yeiG |
| Title : Genome sequence of enterohaemorrhagic Escherichia coli O157:H7 - Perna_2001_Nature_409_529 |
| Author(s) : Perna NT , Plunkett G, 3rd , Burland V , Mau B , Glasner JD , Rose DJ , Mayhew GF , Evans PS , Gregor J , Kirkpatrick HA , Posfai G , Hackett J , Klink S , Boutin A , Shao Y , Miller L , Grotbeck EJ , Davis NW , Lim A , Dimalanta ET , Potamousis KD , Apodaca J , Anantharaman TS , Lin J , Yen G , Schwartz DC , Welch RA , Blattner FR |
| Ref : Nature , 409 :529 , 2001 |
| Abstract : |
| PubMedSearch : Perna_2001_Nature_409_529 |
| PubMedID: 11206551 |
| Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C0410 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-MCMK , ecoli-mhpc , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yhet , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-yqia , ecoli-Z0347 , ecoli-Z1341 , ecoli-Z1930 , ecoli-Z2445 , ecoli-YfhR |
| Title : Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12 - Hayashi_2001_DNA.Res_8_11 |
| Author(s) : Hayashi T , Makino K , Ohnishi M , Kurokawa K , Ishii K , Yokoyama K , Han CG , Ohtsubo E , Nakayama K , Murata T , Tanaka M , Tobe T , Iida T , Takami H , Honda T , Sasakawa C , Ogasawara N , Yasunaga T , Kuhara S , Shiba T , Hattori M , Shinagawa H |
| Ref : DNA Research , 8 :11 , 2001 |
| Abstract : |
| PubMedSearch : Hayashi_2001_DNA.Res_8_11 |
| PubMedID: 11258796 |
| Gene_locus related to this paper: ecoli-rutD , ecoli-bioh , ecoli-C0410 , ecoli-entf , ecoli-fes , ecoli-MCMK , ecoli-mhpc , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-yqia , ecoli-Z0347 , ecoli-Z1341 , ecoli-Z1930 , ecoli-Z2445 , ecoli-YfhR |
| Title : The complete genome sequence of Escherichia coli K-12 - Blattner_1997_Science_277_1453 |
| Author(s) : Blattner FR , Plunkett G, 3rd , Bloch CA , Perna NT , Burland V , Riley M , Collado-Vides J , Glasner JD , Rode CK , Mayhew GF , Gregor J , Davis NW , Kirkpatrick HA , Goeden MA , Rose DJ , Mau B , Shao Y |
| Ref : Science , 277 :1453 , 1997 |
| Abstract : |
| PubMedSearch : Blattner_1997_Science_277_1453 |
| PubMedID: 9278503 |
| Gene_locus related to this paper: ecoli-Aes , ecoli-bioh , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-yqia , ecoli-YfhR |