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Danchin A

References (10)

Title : Parallel evolution of non-homologous isofunctional enzymes in methionine biosynthesis - Bastard_2017_Nat.Chem.Biol_13_858
Author(s) : Bastard K , Perret A , Mariage A , Bessonnet T , Pinet-Turpault A , Petit JL , Darii E , Bazire P , Vergne-Vaxelaire C , Brewee C , Debard A , Pellouin V , Besnard-Gonnet M , Artiguenave F , Medigue C , Vallenet D , Danchin A , Zaparucha A , Weissenbach J , Salanoubat M , de Berardinis V
Ref : Nat Chemical Biology , 13 :858 , 2017
Abstract :
PubMedSearch : Bastard_2017_Nat.Chem.Biol_13_858
PubMedID: 28581482
Gene_locus related to this paper: neima-metx , strmk-metx , defds-metxa , desmr-metxa , halvd-metxa , metfp-metxa , sulao-metxa , hallt-metxa , metez-metxa , halaf-metxs , metms-metxa , fraad-sst , halaf-sst , naupa-metxa , metzd-metxa , cycms-metxa , comtk-metxs , metpe-metxa , metrm-metxa , halnc-metxs , breda-metxs

Title : Organised genome dynamics in the Escherichia coli species results in highly diverse adaptive paths - Touchon_2009_PLoS.Genet_5_e1000344
Author(s) : Touchon M , Hoede C , Tenaillon O , Barbe V , Baeriswyl S , Bidet P , Bingen E , Bonacorsi S , Bouchier C , Bouvet O , Calteau A , Chiapello H , Clermont O , Cruveiller S , Danchin A , Diard M , Dossat C , Karoui ME , Frapy E , Garry L , Ghigo JM , Gilles AM , Johnson J , Le Bouguenec C , Lescat M , Mangenot S , Martinez-Jehanne V , Matic I , Nassif X , Oztas S , Petit MA , Pichon C , Rouy Z , Ruf CS , Schneider D , Tourret J , Vacherie B , Vallenet D , Medigue C , Rocha EP , Denamur E
Ref : PLoS Genet , 5 :e1000344 , 2009
Abstract :
PubMedSearch : Touchon_2009_PLoS.Genet_5_e1000344
PubMedID: 19165319
Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C0410 , ecoli-C2429 , ecoli-C3633 , ecoli-C3636 , ecoli-C4836 , ecoli-d7xp23 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-IROD , ecoli-IROE , ecoli-mhpc , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-ypt1 , ecoli-yqia , ecoli-Z0347 , ecoli-Z1930 , ecoli-YfhR , ecout-q1r7l6 , escfe-e9z855 , yerpe-YBTT , ecolx-e0qx45

Title : From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later - Barbe_2009_Microbiology_155_1758
Author(s) : Barbe V , Cruveiller S , Kunst F , Lenoble P , Meurice G , Sekowska A , Vallenet D , Wang T , Moszer I , Medigue C , Danchin A
Ref : Microbiology , 155 :1758 , 2009
Abstract :
PubMedSearch : Barbe_2009_Microbiology_155_1758
PubMedID: 19383706

Title : A tale of two oxidation states: bacterial colonization of arsenic-rich environments - Muller_2007_PLoS.Genet_3_e53
Author(s) : Muller D , Medigue C , Koechler S , Barbe V , Barakat M , Talla E , Bonnefoy V , Krin E , Arsene-Ploetze F , Carapito C , Chandler M , Cournoyer B , Cruveiller S , Dossat C , Duval S , Heymann M , Leize E , Lieutaud A , Lievremont D , Makita Y , Mangenot S , Nitschke W , Ortet P , Perdrial N , Schoepp B , Siguier P , Simeonova DD , Rouy Z , Segurens B , Turlin E , Vallenet D , Van Dorsselaer A , Weiss S , Weissenbach J , Lett MC , Danchin A , Bertin PN
Ref : PLoS Genet , 3 :e53 , 2007
Abstract :
PubMedSearch : Muller_2007_PLoS.Genet_3_e53
PubMedID: 17432936
Gene_locus related to this paper: herar-a4g4w8 , herar-a4g5p0 , herar-a4g6p3 , herar-a4g378 , herar-a4g411 , herar-a4g622 , herar-a4g818 , herar-a4g899 , herar-a4gac3 , herar-metx , herar-a4g8n7

Title : Coping with cold: the genome of the versatile marine Antarctica bacterium Pseudoalteromonas haloplanktis TAC125 - Medigue_2005_Genome.Res_15_1325
Author(s) : Medigue C , Krin E , Pascal G , Barbe V , Bernsel A , Bertin PN , Cheung F , Cruveiller S , D'Amico S , Duilio A , Fang G , Feller G , Ho C , Mangenot S , Marino G , Nilsson J , Parrilli E , Rocha EP , Rouy Z , Sekowska A , Tutino ML , Vallenet D , von Heijne G , Danchin A
Ref : Genome Res , 15 :1325 , 2005
Abstract :
PubMedSearch : Medigue_2005_Genome.Res_15_1325
PubMedID: 16169927
Gene_locus related to this paper: pseht-q3icg6 , pseht-q3icm3 , pseht-q3icu1 , pseht-q3id97 , pseht-q3ida0 , pseht-q3idf4 , pseht-q3ie89 , pseht-q3ieu0 , pseht-q3iev9 , pseht-q3if93 , pseht-q3ifd8 , pseht-q3ife2 , pseht-q3ig70 , pseht-q3igp2 , pseht-q3igv0 , pseht-q3ihr6 , pseht-q3ii38 , pseht-q3iid7 , pseht-q3iip2 , pseht-q3iir1 , pseht-q3iis4 , pseht-q3ijn3 , pseht-q3ijt3 , pseht-q3ijy1 , pseht-q3ijy8 , pseht-q3ik03 , pseht-q3ikv5 , pseht-q3il66 , pseht-q3ik88

Title : Unique physiological and pathogenic features of Leptospira interrogans revealed by whole-genome sequencing - Ren_2003_Nature_422_888
Author(s) : Ren SX , Fu G , Jiang XG , Zeng R , Miao YG , Xu H , Zhang YX , Xiong H , Lu G , Lu LF , Jiang HQ , Jia J , Tu YF , Jiang JX , Gu WY , Zhang YQ , Cai Z , Sheng HH , Yin HF , Zhang Y , Zhu GF , Wan M , Huang HL , Qian Z , Wang SY , Ma W , Yao ZJ , Shen Y , Qiang BQ , Xia QC , Guo XK , Danchin A , Saint Girons I , Somerville RL , Wen YM , Shi MH , Chen Z , Xu JG , Zhao GP
Ref : Nature , 422 :888 , 2003
Abstract :
PubMedSearch : Ren_2003_Nature_422_888
PubMedID: 12712204
Gene_locus related to this paper: lepin-AXEA , lepin-ESTA , lepin-LA0357 , lepin-LA0587 , lepin-LA0823 , lepin-LA0932 , lepin-LA1069 , lepin-LA1345 , lepin-LA1541 , lepin-LA1702 , lepin-LA1861 , lepin-LA1902 , lepin-LA1936 , lepin-LA1955 , lepin-LA2034 , lepin-LA2132 , lepin-LA2501 , lepin-LA2505 , lepin-LA2526 , lepin-LA2544 , lepin-LA2857 , lepin-LA2958 , lepin-LA3100 , lepin-LA3107 , lepin-LA3147 , lepin-LA3604 , lepin-LA3661 , lepin-LA3669 , lepin-LA3672 , lepin-LA3770 , lepin-LA3788 , lepin-LA3851 , lepin-LA3897 , lepin-LA3998 , lepin-LA4247 , lepin-LB147 , lepin-LB264 , lepin-LB265 , lepin-METX , lepin-q8f7a8 , lepin-q72tt9

Title : The genome sequence of the entomopathogenic bacterium Photorhabdus luminescens - Duchaud_2003_Nat.Biotechnol_21_1307
Author(s) : Duchaud E , Rusniok C , Frangeul L , Buchrieser C , Givaudan A , Taourit S , Bocs S , Boursaux-Eude C , Chandler M , Charles JF , Dassa E , Derose R , Derzelle S , Freyssinet G , Gaudriault S , Medigue C , Lanois A , Powell K , Siguier P , Vincent R , Wingate V , Zouine M , Glaser P , Boemare N , Danchin A , Kunst F
Ref : Nat Biotechnol , 21 :1307 , 2003
Abstract :
PubMedSearch : Duchaud_2003_Nat.Biotechnol_21_1307
PubMedID: 14528314
Gene_locus related to this paper: pholl-q7maz3 , pholl-q7mb82 , pholl-q7mza3 , pholl-q7mzf6 , pholl-q7n0d9 , pholl-q7n2c6 , pholl-q7n2f0 , pholl-q7n2f7 , pholl-q7n2k4 , pholl-q7n3k0 , pholl-q7n3p5 , pholl-q7n3s1 , pholl-q7n4k8 , pholl-q7n4l0 , pholl-q7n4l7 , pholl-q7n4q6 , pholl-q7n4x6 , pholl-q7n5r3 , pholl-q7n6m7 , pholl-q7n6m8 , pholl-q7n6m9 , pholl-q7n6n0 , pholl-q7n7d3 , pholl-q7n8a5 , pholl-q7n132 , pholl-q7n239 , pholl-q7n246 , pholl-q7n258 , pholl-y1242 , pholu-BIOH , pholu-LUXD2 , pholu-PIP , pholu-PLDB , pholu-PLU0113 , pholu-PLU0399 , pholu-PLU1261 , pholu-PLU1531 , pholu-PLU1532 , pholu-PLU2160 , pholu-PLU2202 , pholu-PLU2437 , pholu-PLU3206

Title : Genome-based analysis of virulence genes in a non-biofilm-forming Staphylococcus epidermidis strain (ATCC 12228) - Zhang_2003_Mol.Microbiol_49_1577
Author(s) : Zhang YQ , Ren SX , Li HL , Wang YX , Fu G , Yang J , Qin ZQ , Miao YG , Wang WY , Chen RS , Shen Y , Chen Z , Yuan ZH , Zhao GP , Qu D , Danchin A , Wen YM
Ref : Molecular Microbiology , 49 :1577 , 2003
Abstract :
PubMedSearch : Zhang_2003_Mol.Microbiol_49_1577
PubMedID: 12950922
Gene_locus related to this paper: staep-GEHD , staep-lipas , staep-SE0011 , staep-SE0226 , staep-SE0386 , staep-SE0389 , staep-SE0424 , staep-SE0564 , staep-SE0714 , staep-SE0745 , staep-SE0980 , staep-SE1436 , staep-SE1460 , staep-SE1510 , staep-SE1780 , staep-SE1929 , staep-SERP2035 , staep-SE2050 , staep-SE2095 , staep-SE2213 , staep-SE2328 , staep-SE2403

Title : Detecting and analyzing DNA sequencing errors: toward a higher quality of the Bacillus subtilis genome sequence - Medigue_1999_Genome.Res_9_1116
Author(s) : Medigue C , Rose M , Viari A , Danchin A
Ref : Genome Res , 9 :1116 , 1999
Abstract :
PubMedSearch : Medigue_1999_Genome.Res_9_1116
PubMedID: 10568751
Gene_locus related to this paper: bacsu-YUKL

Title : The complete genome sequence of the gram-positive bacterium Bacillus subtilis - Kunst_1997_Nature_390_249
Author(s) : Kunst F , Ogasawara N , Moszer I , Albertini AM , Alloni G , Azevedo V , Bertero MG , Bessieres P , Bolotin A , Borchert S , Borriss R , Boursier L , Brans A , Braun M , Brignell SC , Bron S , Brouillet S , Bruschi CV , Caldwell B , Capuano V , Carter NM , Choi SK , Cordani JJ , Connerton IF , Cummings NJ , Daniel RA , Denziot F , Devine KM , Dusterhoft A , Ehrlich SD , Emmerson PT , Entian KD , Errington J , Fabret C , Ferrari E , Foulger D , Fritz C , Fujita M , Fujita Y , Fuma S , Galizzi A , Galleron N , Ghim SY , Glaser P , Goffeau A , Golightly EJ , Grandi G , Guiseppi G , Guy BJ , Haga K , Haiech J , Harwood CR , Henaut A , Hilbert H , Holsappel S , Hosono S , Hullo MF , Itaya M , Jones L , Joris B , Karamata D , Kasahara Y , Klaerr-Blanchard M , Klein C , Kobayashi Y , Koetter P , Koningstein G , Krogh S , Kumano M , Kurita K , Lapidus A , Lardinois S , Lauber J , Lazarevic V , Lee SM , Levine A , Liu H , Masuda S , Mauel C , Medigue C , Medina N , Mellado RP , Mizuno M , Moestl D , Nakai S , Noback M , Noone D , O'Reilly M , Ogawa K , Ogiwara A , Oudega B , Park SH , Parro V , Pohl TM , Portelle D , Porwollik S , Prescott AM , Presecan E , Pujic P , Purnelle B , Rapoport G , Rey M , Reynolds S , Rieger M , Rivolta C , Rocha E , Roche B , Rose M , Sadaie Y , Sato T , Scanlan E , Schleich S , Schroeter R , Scoffone F , Sekiguchi J , Sekowska A , Seror SJ , Serror P , Shin BS , Soldo B , Sorokin A , Tacconi E , Takagi T , Takahashi H , Takemaru K , Takeuchi M , Tamakoshi A , Tanaka T , Terpstra P , Togoni A , Tosato V , Uchiyama S , Vandebol M , Vannier F , Vassarotti A , Viari A , Wambutt R , Wedler H , Weitzenegger T , Winters P , Wipat A , Yamamoto H , Yamane K , Yasumoto K , Yata K , Yoshida K , Yoshikawa HF , Zumstein E , Yoshikawa H , Danchin A
Ref : Nature , 390 :249 , 1997
Abstract :
PubMedSearch : Kunst_1997_Nature_390_249
PubMedID: 9384377
Gene_locus related to this paper: bacsu-CAH , bacsu-cbxnp , bacsu-lip , bacsu-LIPB , bacsu-PKSR , bacsu-pnbae , bacsu-PPSE , bacsu-srf4 , bacsu-srfac , bacsu-YBAC , bacsu-YBDG , bacsu-ybfk , bacsu-ycgS , bacsu-yczh , bacsu-YDEN , bacsu-ydjp , bacsu-yfhM , bacsu-yisY , bacsu-YITV , bacsu-yjau , bacsu-YJCH , bacsu-MHQD , bacsu-yqjl , bacsu-yqkd , bacsu-YRAK , bacsu-YTAP , bacsu-YTMA , bacsu-YTPA , bacsu-ytxm , bacsu-yugF , bacsu-YUII , bacsu-YUKL , bacsu-YVAK , bacsu-YvaM , bacsu-RsbQ