Bacterial_lip_FamI.5

Relationship

Family: Bacterial_lip_FamI.5

Block: L

Parent Family: Bacterial_lipase

Comment

This family correspond to family I.5 of the classification of Arpigny and Jaeger (1999) and abH15 of the LED database. It includes lipases from gram positive bacteria, organic-solvent tolerant, showing thermoalkalophilic properties and high molecular weight resulting from extra domain where a zinc ion is coordinatively bound to the enzyme. The family also contains poly (butylene adipate-co-terephthalate)-hydrolyzing lipase from Pelosinus fermentans

Database

Interpro : No interpro

PIRSF : No PIRSF

Pdoc : No Pdoc

Pfam : No Pfam

Prints : No Print

EC Number : No EC Number

Sequences

Peptide in Fasta
Nucleotide in Fasta
Alignment with Multalin Text only
Seed alignment with MAFFT No colour
Alignment with MAFFT No colour
Dendrogram The dnd file

Structures (31)

Genes Proteins in Bacterial_lip_FamI.5 family (19)

No fragment of genes

Structures in Bacterial_lip_FamI.5 family (31)

Substrates in Bacterial_lip_FamI.5 family (17)

Inhibitors in Bacterial_lip_FamI.5 family (4)

References (11)

Title : Characterization of a poly(butylene adipate-co-terephthalate)-hydrolyzing lipase from Pelosinus fermentans - Biundo_2016_Appl.Microbiol.Biotechnol_100_1753
Author(s) : Biundo A , Hromic A , Pavkov-Keller T , Gruber K , Quartinello F , Haernvall K , Perz V , Arrell MS , Zinn M , Ribitsch D , Guebitz GM
Ref : Applied Microbiology & Biotechnology , 100 :1753 , 2016
PubMedID: 26490551
Gene_locus related to this paper: 9firm-a0a0a0ymq9

Title : Improvement of thermal stability via outer-loop ion pair interaction of mutated T1 lipase from Geobacillus zalihae strain T1 - Ruslan_2012_Int.J.Mol.Sci_13_943
Author(s) : Ruslan R , Rahman RNZRA , Leow ATC , Ali MSM , Basri M , Salleh AB
Ref : Int J Mol Sci , 13 :943 , 2012
PubMedID: 22312296
Gene_locus related to this paper: bacsp-lip

Title : High level expression and characterization of a novel thermostable, organic solvent tolerant, 1,3-regioselective lipase from Geobacillus sp. strain ARM - Ebrahimpour_2011_Bioresour.Technol_102_6972
Author(s) : Ebrahimpour A , Rahman RNZRA , Basri M , Salleh AB
Ref : Bioresour Technol , 102 :6972 , 2011
PubMedID: 21531550
Gene_locus related to this paper: bacsp-lip , geose-q93a71

Title : Crystallization and preliminary X-ray crystallographic analysis of a thermostable organic solvent-tolerant lipase from Bacillus sp. strain 42 - Khusaini_2011_Acta.Crystallogr.Sect.F.Struct.Biol.Cryst.Commun_67_401
Author(s) : Khusaini MS , Rahman RNZRA , Ali MSM , Leow ATC , Basri M , Salleh AB
Ref : Acta Crystallographica Sect F Struct Biol Cryst Commun , 67 :401 , 2011
PubMedID: 21393852
Gene_locus related to this paper: bacsp-lip

Title : Crystallization and preliminary X-ray crystallographic analysis of highly thermostable L2 lipase from the newly isolated Bacillus sp. L2 - Shariff_2010_Acta.Crystallogr.Sect.F.Struct.Biol.Cryst.Commun_66_715
Author(s) : Shariff FM , Rahman RNZRA , Ali MSM , Chor AL , Basri M , Salleh AB
Ref : Acta Crystallographica Sect F Struct Biol Cryst Commun , 66 :715 , 2010
PubMedID: 20516608
Gene_locus related to this paper: bacsp-lip

Title : Activation of bacterial thermoalkalophilic lipases is spurred by dramatic structural rearrangements - Carrasco-Lopez_2009_J.Biol.Chem_284_4365
Author(s) : Carrasco-Lopez C , Godoy C , de Las Rivas B , Fernandez-Lorente G , Palomo JM , Guisan JM , Fernandez-Lafuente R , Martinez-Ripoll M , Hermoso JA
Ref : Journal of Biological Chemistry , 284 :4365 , 2009
PubMedID: 19056729
Gene_locus related to this paper: bactc-lipas

Title : Novel cation-pi interaction revealed by crystal structure of thermoalkalophilic lipase -
Author(s) : Matsumura H , Yamamoto T , Leow ATC , Mori T , Salleh AB , Basri M , Inoue T , Kai Y , Rahman RNZRA
Ref : Proteins , 70 :592 , 2008
PubMedID: 17932933
Gene_locus related to this paper: bacsp-lip

Title : Lipases for biotechnology - Jaeger_2002_Curr.Opin.Biotechnol_13_390
Author(s) : Jaeger KE , Eggert T
Ref : Curr Opin Biotechnol , 13 :390 , 2002
PubMedID: 12323363

Title : Novel zinc-binding center and a temperature switch in the Bacillus stearothermophilus L1 lipase - Jeong_2002_J.Biol.Chem_277_17041
Author(s) : Jeong ST , Kim HK , Kim SJ , Chi SW , Pan JG , Oh TK , Ryu SE
Ref : Journal of Biological Chemistry , 277 :17041 , 2002
PubMedID: 11859083
Gene_locus related to this paper: geost-lipas

Title : Crystal Structure of a Thermostable Lipase from Bacillus stearothermophilus P1 - Tyndall_2002_J.Mol.Biol_323_859
Author(s) : Tyndall JD , Sinchaikul S , Fothergill-Gilmore LA , Taylor P , Walkinshaw MD
Ref : Journal of Molecular Biology , 323 :859 , 2002
PubMedID: 12417199
Gene_locus related to this paper: geost-lipas

Title : Bacterial lipolytic enzymes: classification and properties - Arpigny_1999_Biochem.J_343_177
Author(s) : Arpigny JL , Jaeger KE
Ref : Biochemical Journal , 343 :177 , 1999
PubMedID: 10493927