1. Home
  2. Author
  3. de Vries RP

de Vries RP

References (54)

Title : Screening of novel fungal Carbohydrate Esterase family 1 enzymes identifies three novel dual feruloyl\/acetyl xylan esterases - Dilokpimol_2022_FEBS.Lett__
Author(s) : Dilokpimol A , Verkerk B , Li X , Bellemare A , Lavallee M , Frommhagen M , Normolle Underlin E , Kabel MA , Powlowski J , Tsang A , de Vries RP
Ref : FEBS Letters , : , 2022
Abstract :
PubMedSearch : Dilokpimol_2022_FEBS.Lett__
PubMedID: 35187647
Gene_locus related to this paper: emeni-axe1 , aspng-a0a100iph2 , talem-e9m3d1 , myctt-g2qd29 , chatd-g0sbz2 , chatd-g0s216 , mycse-fae1c , mycse-fae1f , mycse-fae1e , mycse-axe1b , mycse-fae4 , acrth-axe1a , chagb-q2gyn8

Title : From lignocellulose to plastics: Knowledge transfer on the degradation approaches by fungi - Daly_2021_Biotechnol.Adv__107770
Author(s) : Daly P , Cai F , Kubicek CP , Jiang S , Grujic M , Rahimi MJ , Sheteiwy MS , Giles R , Riaz A , de Vries RP , Akcapinar GB , Wei L , Druzhinina IS
Ref : Biotechnol Adv , :107770 , 2021
Abstract :
PubMedSearch : Daly_2021_Biotechnol.Adv__107770
PubMedID: 33989704

Title : Vanillic acid and methoxyhydroquinone production from guaiacyl units and related aromatic compounds using Aspergillus niger cell factories - Lubbers_2021_Microb.Cell.Fact_20_151
Author(s) : Lubbers RJM , Dilokpimol A , Nousiainen PA , Cioc RC , Visser J , Bruijnincx PCA , de Vries RP
Ref : Microb Cell Fact , 20 :151 , 2021
Abstract :
PubMedSearch : Lubbers_2021_Microb.Cell.Fact_20_151
PubMedID: 34344380

Title : Functional Validation of Two Fungal Subfamilies in Carbohydrate Esterase Family 1 by Biochemical Characterization of Esterases From Uncharacterized Branches - Li_2020_Front.Bioeng.Biotechnol_8_694
Author(s) : Li X , Griffin K , Langeveld S , Frommhagen M , Underlin EN , Kabel MA , de Vries RP , Dilokpimol A
Ref : Front Bioeng Biotechnol , 8 :694 , 2020
Abstract :
PubMedSearch : Li_2020_Front.Bioeng.Biotechnol_8_694
PubMedID: 32671051

Title : Feruloyl Esterases for Biorefineries: Subfamily Classified Specificity for Natural Substrates - Underlin_2020_Front.Bioeng.Biotechnol_8_332
Author(s) : Underlin EN , Frommhagen M , Dilokpimol A , van Erven G , de Vries RP , Kabel MA
Ref : Front Bioeng Biotechnol , 8 :332 , 2020
Abstract :
PubMedSearch : Underlin_2020_Front.Bioeng.Biotechnol_8_332
PubMedID: 32391342
Gene_locus related to this paper: stehr-ShFae1 , 9euro-a0a1l9t4i5 , aspng-AnFaeJ , 9euro-a0a1l9t9j3 , 9euro-a0a1l9txk3 , myctt-faeb , aspnc-faec , aspni-FAEA , 9euro-a0a1l9tdb5 , myctt-g2qmb4 , 9euro-g4xkn5

Title : Characterization of a feruloyl esterase from Aspergillus terreus facilitates the division of fungal enzymes from Carbohydrate Esterase family 1 of the carbohydrate-active enzymes (CAZy) database - Makela_2018_Microb.Biotechnol_11_869
Author(s) : Makela MR , Dilokpimol A , Koskela SM , Kuuskeri J , de Vries RP , Hilden K
Ref : Microb Biotechnol , 11 :869 , 2018
Abstract :
PubMedSearch : Makela_2018_Microb.Biotechnol_11_869
PubMedID: 29697197
Gene_locus related to this paper: asptn-q0ci40

Title : Fungal glucuronoyl esterases: Genome mining based enzyme discovery and biochemical characterization - Dilokpimol_2018_N.Biotechnol_40_282
Author(s) : Dilokpimol A , Makela MR , Cerullo G , Zhou M , Varriale S , Gidijala L , Bras JLA , Jutten P , Piechot A , Verhaert R , Faraco V , Hilden KS , de Vries RP
Ref : N Biotechnol , 40 :282 , 2018
Abstract :
PubMedSearch : Dilokpimol_2018_N.Biotechnol_40_282
PubMedID: 29051046

Title : Fungal feruloyl esterases: Functional validation of genome mining based enzyme discovery including uncharacterized subfamilies - Dilokpimol_2018_N.Biotechnol_41_9
Author(s) : Dilokpimol A , Makela MR , Varriale S , Zhou M , Cerullo G , Gidijala L , Hinkka H , Bras JLA , Jutten P , Piechot A , Verhaert R , Hilden KS , Faraco V , de Vries RP
Ref : N Biotechnol , 41 :9 , 2018
Abstract :
PubMedSearch : Dilokpimol_2018_N.Biotechnol_41_9
PubMedID: 29174720
Gene_locus related to this paper: aspng-a0a100iph2

Title : Genomic and Genetic Insights Into a Cosmopolitan Fungus, Paecilomyces variotii (Eurotiales) - Urquhart_2018_Front.Microbiol_9_3058
Author(s) : Urquhart AS , Mondo SJ , Makela MR , Hane JK , Wiebenga A , He G , Mihaltcheva S , Pangilinan J , Lipzen A , Barry K , de Vries RP , Grigoriev IV , Idnurm A
Ref : Front Microbiol , 9 :3058 , 2018
Abstract :
PubMedSearch : Urquhart_2018_Front.Microbiol_9_3058
PubMedID: 30619145
Gene_locus related to this paper: byssp-a0a443i770 , byssp-a0a443i5x3 , byssp-vdta1

Title : The obligate alkalophilic soda-lake fungus Sodiomyces alkalinus has shifted to a protein diet - Grum-Grzhimaylo_2018_Mol.Ecol_27_4808
Author(s) : Grum-Grzhimaylo AA , Falkoski DL , van den Heuvel J , Valero-Jimenez CA , Min B , Choi IG , Lipzen A , Daum CG , Aanen DK , Tsang A , Henrissat B , Bilanenko EN , de Vries RP , van Kan JAL , Grigoriev IV , Debets AJM
Ref : Mol Ecol , 27 :4808 , 2018
Abstract :
PubMedSearch : Grum-Grzhimaylo_2018_Mol.Ecol_27_4808
PubMedID: 30368956
Gene_locus related to this paper: 9pezi-a0a3n2q0e7 , 9pezi-a0a3n2pu70 , 9pezi-a0a3n2puy7

Title : Characterisation of three fungal glucuronoyl esterases on glucuronic acid ester model compounds - Huttner_2017_Appl.Microbiol.Biotechnol_101_5301
Author(s) : Huttner S , Klaubauf S , de Vries RP , Olsson L
Ref : Applied Microbiology & Biotechnology , 101 :5301 , 2017
Abstract :
PubMedSearch : Huttner_2017_Appl.Microbiol.Biotechnol_101_5301
PubMedID: 28429057
Gene_locus related to this paper: wolco-gce1 , acram-a0a1d8ejg8 , phacr-gce1 , phacr-gce2

Title : Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus - de Vries_2017_Genome.Biol_18_28
Author(s) : de Vries RP , Riley R , Wiebenga A , Aguilar-Osorio G , Amillis S , Uchima CA , Anderluh G , Asadollahi M , Askin M , Barry K , Battaglia E , Bayram O , Benocci T , Braus-Stromeyer SA , Caldana C , Canovas D , Cerqueira GC , Chen F , Chen W , Choi C , Clum A , Dos Santos RA , Damasio AR , Diallinas G , Emri T , Fekete E , Flipphi M , Freyberg S , Gallo A , Gournas C , Habgood R , Hainaut M , Harispe ML , Henrissat B , Hilden KS , Hope R , Hossain A , Karabika E , Karaffa L , Karanyi Z , Krasevec N , Kuo A , Kusch H , LaButti K , Lagendijk EL , Lapidus A , Levasseur A , Lindquist E , Lipzen A , Logrieco AF , Maccabe A , Makela MR , Malavazi I , Melin P , Meyer V , Mielnichuk N , Miskei M , Molnar AP , Mule G , Ngan CY , Orejas M , Orosz E , Ouedraogo JP , Overkamp KM , Park HS , Perrone G , Piumi F , Punt PJ , Ram AF , Ramon A , Rauscher S , Record E , Riano-Pachon DM , Robert V , Rohrig J , Ruller R , Salamov A , Salih NS , Samson RA , Sandor E , Sanguinetti M , Schutze T , Sepcic K , Shelest E , Sherlock G , Sophianopoulou V , Squina FM , Sun H , Susca A , Todd RB , Tsang A , Unkles SE , van de Wiele N , van Rossen-Uffink D , Oliveira JV , Vesth TC , Visser J , Yu JH , Zhou M , Andersen MR , Archer DB , Baker SE , Benoit I , Brakhage AA , Braus GH , Fischer R , Frisvad JC , Goldman GH , Houbraken J , Oakley B , Pocsi I , Scazzocchio C , Seiboth B , vanKuyk PA , Wortman J , Dyer PS , Grigoriev IV
Ref : Genome Biol , 18 :28 , 2017
Abstract :
PubMedSearch : de Vries_2017_Genome.Biol_18_28
PubMedID: 28196534
Gene_locus related to this paper: asptu-a0a1l9nhd0 , aspve-a0a1l9pxx8 , aspve-a0a1l9q4m3 , aspwe-a0a1l9s133 , 9euro-a0a1l9t3v9 , aspwe-a0a1l9rcx6 , aspna-g3y5a6 , aspgl-a0a1l9v4d3 , 9euro-a0a1l9sa36 , aspsb-a0a319eji6 , aspve-a0a1l9px96 , 9euro-a0a1l9tay1 , aspgl-a0a1l9vbc0 , aspc5-a0a1r3rh65 , 9euro-a0a2v5i956 , aspwe-a0a1l9rpp6 , aspna-g3xpw9 , aspve-a0a1l9plv1 , 9euro-a0a1l9tk47 , aspve-a0a1l9pde9 , aspve-a0a1l9pz72 , aspwe-a0a1l9rde6 , 9euro-a0a1l9tdb5 , aspkw-g7xq95 , aspbc-a0a1l9u6h4 , aspbc-a0a1l9u2l4 , asptc-a0a1l9mx83 , aspgl-a0a1l9ve90 , aspve-a0a1l9pvz9 , 9euro-a0a1l9tdh3 , aspc5-a0a1r3rmn9 , aspwe-a0a1l9rlq2 , asptc-a0a1l9nby7 , aspng-a0a100i8t9 , aspc5-a0a1r3rem6 , aspbc-a0a1l9uy89 , aspa1-anee , aspa1-aneh , aspa1-acrc , aspbc-alba , aspa1-acui

Title : Expanding the feruloyl esterase gene family of Aspergillus niger by characterization of a feruloyl esterase, FaeC - Dilokpimol_2017_N.Biotechnol_37_200
Author(s) : Dilokpimol A , Makela MR , Mansouri S , Belova O , Waterstraat M , Bunzel M , de Vries RP , Hilden KS
Ref : N Biotechnol , 37 :200 , 2017
Abstract :
PubMedSearch : Dilokpimol_2017_N.Biotechnol_37_200
PubMedID: 28285179
Gene_locus related to this paper: aspnc-faec

Title : Diversity of fungal feruloyl esterases: updated phylogenetic classification, properties, and industrial applications - Dilokpimol_2016_Biotechnol.Biofuels_9_231
Author(s) : Dilokpimol A , Makela MR , Aguilar-Pontes MV , Benoit-Gelber I , Hilden KS , de Vries RP
Ref : Biotechnol Biofuels , 9 :231 , 2016
Abstract :
PubMedSearch : Dilokpimol_2016_Biotechnol.Biofuels_9_231
PubMedID: 27795736
Gene_locus related to this paper: stehr-ShFae1 , 9euro-a0a1l9t4i5 , aspng-AnFaeJ , 9euro-a0a1l9t9j3 , 9euro-a0a1l9txk3 , myctt-faeb , aspni-FAEA , 9euro-a0a1l9tdb5 , myctt-g2qmb4 , 9euro-g4xkn5

Title : Comparative genomics of the white-rot fungi, Phanerochaete carnosa and P. chrysosporium, to elucidate the genetic basis of the distinct wood types they colonize - Suzuki_2012_BMC.Genomics_13_444
Author(s) : Suzuki H , MacDonald J , Syed K , Salamov A , Hori C , Aerts A , Henrissat B , Wiebenga A , vanKuyk PA , Barry K , Lindquist E , LaButti K , Lapidus A , Lucas S , Coutinho P , Gong Y , Samejima M , Mahadevan R , Abou-Zaid M , de Vries RP , Igarashi K , Yadav JS , Grigoriev IV , Master ER
Ref : BMC Genomics , 13 :444 , 2012
Abstract :
PubMedSearch : Suzuki_2012_BMC.Genomics_13_444
PubMedID: 22937793
Gene_locus related to this paper: phacs-k5whx2 , phacs-k5v2s8 , phacs-k5v5r2 , phacs-k5vyk5 , phacs-k5vzf8 , phacs-k5wbu9 , phacs-k5wc10 , phacs-k5wpw0 , phacs-k5wzn6 , phacs-k5x1t8 , phacs-k5x5g6 , phacs-k5x5p4

Title : Genome sequence of the button mushroom Agaricus bisporus reveals mechanisms governing adaptation to a humic-rich ecological niche - Morin_2012_Proc.Natl.Acad.Sci.U.S.A_109_17501
Author(s) : Morin E , Kohler A , Baker AR , Foulongne-Oriol M , Lombard V , Nagy LG , Ohm RA , Patyshakuliyeva A , Brun A , Aerts AL , Bailey AM , Billette C , Coutinho PM , Deakin G , Doddapaneni H , Floudas D , Grimwood J , Hilden K , Kues U , LaButti KM , Lapidus A , Lindquist EA , Lucas SM , Murat C , Riley RW , Salamov AA , Schmutz J , Subramanian V , Wosten HA , Xu J , Eastwood DC , Foster GD , Sonnenberg AS , Cullen D , de Vries RP , Lundell T , Hibbett DS , Henrissat B , Burton KS , Kerrigan RW , Challen MP , Grigoriev IV , Martin F
Ref : Proc Natl Acad Sci U S A , 109 :17501 , 2012
Abstract :
PubMedSearch : Morin_2012_Proc.Natl.Acad.Sci.U.S.A_109_17501
PubMedID: 23045686
Gene_locus related to this paper: agabu-k5x1b4 , agabu-k5x521 , agabu-k5w389 , agabu-k5wbk9 , agabu-k5wrh0 , agabu-k5ws85 , agabu-k5wsf9 , agabu-k5wxv1 , agabu-k5x0d9 , agabu-k5x588 , agabu-k5x5x2 , agabu-k5xd51 , agabu-k5xh54 , agabu-k5xsm1 , agabu-k5xsp8 , agabu-k5xtc1 , agabu-k5y2v2 , agabb-k9i3g9 , agabb-k9hnv7 , agabb-k9hr46 , agabu-k5wys0

Title : Comparative genomics of Ceriporiopsis subvermispora and Phanerochaete chrysosporium provide insight into selective ligninolysis - Fernandez-Fueyo_2012_Proc.Natl.Acad.Sci.U.S.A_109_5458
Author(s) : Fernandez-Fueyo E , Ruiz-Duenas FJ , Ferreira P , Floudas D , Hibbett DS , Canessa P , Larrondo LF , James TY , Seelenfreund D , Lobos S , Polanco R , Tello M , Honda Y , Watanabe T , Ryu JS , Kubicek CP , Schmoll M , Gaskell J , Hammel KE , St John FJ , Vanden Wymelenberg A , Sabat G , Splinter BonDurant S , Syed K , Yadav JS , Doddapaneni H , Subramanian V , Lavin JL , Oguiza JA , Perez G , Pisabarro AG , Ramirez L , Santoyo F , Master E , Coutinho PM , Henrissat B , Lombard V , Magnuson JK , Kues U , Hori C , Igarashi K , Samejima M , Held BW , Barry KW , LaButti KM , Lapidus A , Lindquist EA , Lucas SM , Riley R , Salamov AA , Hoffmeister D , Schwenk D , Hadar Y , Yarden O , de Vries RP , Wiebenga A , Stenlid J , Eastwood D , Grigoriev IV , Berka RM , Blanchette RA , Kersten P , Martinez AT , Vicuna R , Cullen D
Ref : Proc Natl Acad Sci U S A , 109 :5458 , 2012
Abstract :
PubMedSearch : Fernandez-Fueyo_2012_Proc.Natl.Acad.Sci.U.S.A_109_5458
PubMedID: 22434909
Gene_locus related to this paper: cers8-m2r3x2 , cers8-m2qf37 , cers8-m2pcy7 , cers8-m2pcz3 , cers8-m2qn26 , cers8-m2r654 , cers8-m2r8g9 , cers8-m2ps90 , cers8-m2qn44 , cers8-m2q837 , cers8-m2pjy6 , cers8-m2r609 , cers8-m2qy35 , cers8-m2r1n1 , cers8-m2rl22 , cers8-m2qkx5 , cers8-m2qib7 , cers8-m2rgs8 , cers8-m2rlx6 , cers8-m2r4p3 , cers8-m2rf62 , cers8-m2qyx5 , cers8-m2pcz2 , cers8-m2rm22 , cers8-m2qwb7 , cers8-m2r9u3 , cers8-m2pp23 , cers8-m2r613 , cers8-m2rup8 , cers8-m2piv7 , cers8-m2rch3 , cers8-m2qvf7 , cers8-m2qvb7 , cers8-m2qvb2 , cers8-m2pip7 , cers8-m2rb73 , cers8-m2qgd3 , cers8-m2rcg8 , cers8-m2rb68

Title : Insight into trade-off between wood decay and parasitism from the genome of a fungal forest pathogen - Olson_2012_New.Phytol_194_1001
Author(s) : Olson A , Aerts A , Asiegbu F , Belbahri L , Bouzid O , Broberg A , Canback B , Coutinho PM , Cullen D , Dalman K , Deflorio G , van Diepen LT , Dunand C , Duplessis S , Durling M , Gonthier P , Grimwood J , Fossdal CG , Hansson D , Henrissat B , Hietala A , Himmelstrand K , Hoffmeister D , Hogberg N , James TY , Karlsson M , Kohler A , Kues U , Lee YH , Lin YC , Lind M , Lindquist E , Lombard V , Lucas S , Lunden K , Morin E , Murat C , Park J , Raffaello T , Rouze P , Salamov A , Schmutz J , Solheim H , Stahlberg J , Velez H , de Vries RP , Wiebenga A , Woodward S , Yakovlev I , Garbelotto M , Martin F , Grigoriev IV , Stenlid J
Ref : New Phytol , 194 :1001 , 2012
Abstract :
PubMedSearch : Olson_2012_New.Phytol_194_1001
PubMedID: 22463738
Gene_locus related to this paper: 9homo-w4jrb9 , 9homo-w4jsg4 , 9homo-w4kds7 , 9homo-w4jwl9 , 9homo-w4kjy2 , 9homo-w4jw43 , 9homo-w4ka20 , 9homo-w4k8t3 , 9homo-w4jz43 , 9homo-w4k8q2 , 9homo-w4k910 , 9homo-w4k6f5 , 9homo-w4k6j3 , 9homo-w4k8n2 , 9homo-w4jrf3 , 9homo-w4ke07 , 9homo-w4k3i8 , 9homo-w4jqh1 , 9agam-w4k203 , 9agam-w4jpy3 , 9agam-w4jn81 , 9agam-w4jmz2

Title : The genomes of the fungal plant pathogens Cladosporium fulvum and Dothistroma septosporum reveal adaptation to different hosts and lifestyles but also signatures of common ancestry - de Wit_2012_PLoS.Genet_8_E1003088
Author(s) : de Wit PJ , van der Burgt A , Okmen B , Stergiopoulos I , Abd-Elsalam KA , Aerts AL , Bahkali AH , Beenen HG , Chettri P , Cox MP , Datema E , de Vries RP , Dhillon B , Ganley AR , Griffiths SA , Guo Y , Hamelin RC , Henrissat B , Kabir MS , Jashni MK , Kema G , Klaubauf S , Lapidus A , Levasseur A , Lindquist E , Mehrabi R , Ohm RA , Owen TJ , Salamov A , Schwelm A , Schijlen E , Sun H , van den Burg HA , van Ham RC , Zhang S , Goodwin SB , Grigoriev IV , Collemare J , Bradshaw RE
Ref : PLoS Genet , 8 :e1003088 , 2012
Abstract :
PubMedSearch : de Wit_2012_PLoS.Genet_8_E1003088
PubMedID: 23209441
Gene_locus related to this paper: mycpj-q30dw8 , mycp1-n1pnd6 , mycp1-n1per0 , mycp1-n1pg49 , mycp1-n1pwj1 , mycp1-n1pcl8 , mycp1-m2y2b1 , mycp1-n1pwu7 , mycp1-n1ppa8 , mycp1-m2yk59 , mycp1-n1pps5 , mycp1-n1pw13 , mycp1-n1pe19 , mycp1-m2xhl1 , mycp1-n1pnh6 , mycp1-n1psn5 , mycp1-n1puh9 , mycp1-n1phf7 , mycp1-m2y2h4 , mycp1-n1q523 , dotsn-n1q1b1 , dotsn-n1q415 , dotsn-est1

Title : The Paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes - Floudas_2012_Science_336_1715
Author(s) : Floudas D , Binder M , Riley R , Barry K , Blanchette RA , Henrissat B , Martinez AT , Otillar R , Spatafora JW , Yadav JS , Aerts A , Benoit I , Boyd A , Carlson A , Copeland A , Coutinho PM , de Vries RP , Ferreira P , Findley K , Foster B , Gaskell J , Glotzer D , Gorecki P , Heitman J , Hesse C , Hori C , Igarashi K , Jurgens JA , Kallen N , Kersten P , Kohler A , Kues U , Kumar TK , Kuo A , LaButti K , Larrondo LF , Lindquist E , Ling A , Lombard V , Lucas S , Lundell T , Martin R , McLaughlin DJ , Morgenstern I , Morin E , Murat C , Nagy LG , Nolan M , Ohm RA , Patyshakuliyeva A , Rokas A , Ruiz-Duenas FJ , Sabat G , Salamov A , Samejima M , Schmutz J , Slot JC , St John F , Stenlid J , Sun H , Sun S , Syed K , Tsang A , Wiebenga A , Young D , Pisabarro A , Eastwood DC , Martin F , Cullen D , Grigoriev IV , Hibbett DS
Ref : Science , 336 :1715 , 2012
Abstract :
PubMedSearch : Floudas_2012_Science_336_1715
PubMedID: 22745431
Gene_locus related to this paper: aurde-j0d098 , aurde-j0dc31 , glota-s7rlc1 , fompi-s8f7s4 , dacsp-m5fpg2 , dicsq-r7sm16 , dacsp-m5g7q5 , dacsp-m5fr12 , glota-s7q5w3 , fompi-s8f826.1 , fompi-s8f826.2 , dicsq-r7sy09 , glota-s7rt87 , dicsq-r7t032 , glota-s7rym7 , fompi-s8fiv2 , dacsp-m5gda3.2 , dicsq-r7swi6 , dacsp-m5frf2 , fompi-s8ebb6 , dicsq-r7sln3 , dicsq-r7sya6 , dacsp-m5g7g1 , dicsq-r7syx7 , dicsq-r7sx57 , dacsp-m5fps7 , glota-s7pwi7 , dicsq-r7swj6 , fompi-s8ejq6 , dicsq-r7spc3 , glota-s7q258 , dacsp-m5ft65 , glota-s7q3m7 , fompi-s8dkc7 , glota-s7q1z1 , fompi-s8eqi2 , glota-s7q1z8 , fompi-s8du50 , dacsp-m5gg33 , dacsp-m5g3a7 , fompi-s8ecd7 , fompi-s8dps1 , dacsp-m5fwr0 , dicsq-r7sub7 , glota-s7q8k9 , fompi-s8ffc3 , dacsp-m5g2f9 , fompi-s8ecc2 , dacsp-m5g868 , fompi-s8f890 , dicsq-r7t1a8 , fompi-s8ebx4 , fompi-s8eb97 , glota-s7q222 , glota-s7puf0 , fompi-s8f6v9 , dacsp-m5g0z2 , dacsp-m5gdh9 , fompi-s8fb37 , dacsp-m5fy91 , glota-s7q5v6 , fompi-s8fl44 , dicsq-r7stv9 , dicsq-r7szk3 , fompi-s8epq9 , glota-s7rh56 , dacsp-m5gbt1 , punst-r7s3x9 , punst-r7s0t5 , glota-s7q312 , glota-s7rhh6 , dicsq-r7t117 , dicsq-r7slz3

Title : Genomic analysis of the necrotrophic fungal pathogens Sclerotinia sclerotiorum and Botrytis cinerea - Amselem_2011_PLoS.Genet_7_e1002230
Author(s) : Amselem J , Cuomo CA , van Kan JA , Viaud M , Benito EP , Couloux A , Coutinho PM , de Vries RP , Dyer PS , Fillinger S , Fournier E , Gout L , Hahn M , Kohn L , Lapalu N , Plummer KM , Pradier JM , Quevillon E , Sharon A , Simon A , ten Have A , Tudzynski B , Tudzynski P , Wincker P , Andrew M , Anthouard V , Beever RE , Beffa R , Benoit I , Bouzid O , Brault B , Chen Z , Choquer M , Collemare J , Cotton P , Danchin EG , Da Silva C , Gautier A , Giraud C , Giraud T , Gonzalez C , Grossetete S , Guldener U , Henrissat B , Howlett BJ , Kodira C , Kretschmer M , Lappartient A , Leroch M , Levis C , Mauceli E , Neuveglise C , Oeser B , Pearson M , Poulain J , Poussereau N , Quesneville H , Rascle C , Schumacher J , Segurens B , Sexton A , Silva E , Sirven C , Soanes DM , Talbot NJ , Templeton M , Yandava C , Yarden O , Zeng Q , Rollins JA , Lebrun MH , Dickman M
Ref : PLoS Genet , 7 :e1002230 , 2011
Abstract :
PubMedSearch : Amselem_2011_PLoS.Genet_7_e1002230
PubMedID: 21876677
Gene_locus related to this paper: botci-cutas , botci-q6rki2 , botf4-g2y7k8 , botfb-dapb , botfu-g2xyd8 , botfu-g2ynh8 , scls1-a7e814 , scls1-a7edc9 , scls1-a7edh1 , scls1-a7emm0 , scls1-a7eti8 , scls1-a7eu48 , scls1-a7f208 , scls1-dapb , botf4-g2xqp7 , scls1-a7eqq8 , botf4-g2xqc6 , scls1-a7ebs4 , botf4-g2xn51 , scls1-a7f5m9 , botf4-g2xti4 , botf4-g2xtu7 , botf4-g2yfp1 , scls1-a7f534 , botf4-g2yys3 , scls1-a7erz9 , botf4-g2y037 , botf4-g2y0e1 , scls1-a7f706 , scls1-a7ewt6 , botf4-g2yuj6 , botf1-m7u3d1 , botf1-m7u430 , botf1-m7tei8 , botf1-m7u0w9 , botf1-m7tij6 , botf1-m7u819 , botf1-m7u6d8 , botf1-m7tzd4 , botf1-m7tqd7 , botf1-m7tyz9 , botf1-m7unl9 , botf1-m7u429 , botf1-m7u4s5 , botf1-m7ul92 , botf1-m7tx42 , botf1-m7u9h4 , botf1-m7u187 , botf1-m7uz64 , botf1-m7u4q4 , botf1-m7u2f6 , botf1-m7tt59 , botf1-m7v3h2 , botf1-m7u6c9 , botf1-m7tud9 , botf1-m7u309 , scls1-a7et87 , botf4-g2ylt4 , scls1-a7f5a0 , scls1-a7f900 , botf4-g2yib9 , scls1-a7f3m9 , scls1-a7er46 , botf4-g2y3y4 , botf4-g2xyy5 , botf1-m7uct5 , scls1-a7ea78 , scls1-kex1 , scls1-cbpya , botfb-cbpya , scls1-a7ecx1

Title : Finished genome of the fungal wheat pathogen Mycosphaerella graminicola reveals dispensome structure, chromosome plasticity, and stealth pathogenesis - Goodwin_2011_PLoS.Genet_7_e1002070
Author(s) : Goodwin SB , M'Barek S B , Dhillon B , Wittenberg AH , Crane CF , Hane JK , Foster AJ , Van der Lee TA , Grimwood J , Aerts A , Antoniw J , Bailey A , Bluhm B , Bowler J , Bristow J , van der Burgt A , Canto-Canche B , Churchill AC , Conde-Ferraez L , Cools HJ , Coutinho PM , Csukai M , Dehal P , De Wit P , Donzelli B , van de Geest HC , van Ham RC , Hammond-Kosack KE , Henrissat B , Kilian A , Kobayashi AK , Koopmann E , Kourmpetis Y , Kuzniar A , Lindquist E , Lombard V , Maliepaard C , Martins N , Mehrabi R , Nap JP , Ponomarenko A , Rudd JJ , Salamov A , Schmutz J , Schouten HJ , Shapiro H , Stergiopoulos I , Torriani SF , Tu H , de Vries RP , Waalwijk C , Ware SB , Wiebenga A , Zwiers LH , Oliver RP , Grigoriev IV , Kema GH
Ref : PLoS Genet , 7 :e1002070 , 2011
Abstract :
PubMedSearch : Goodwin_2011_PLoS.Genet_7_e1002070
PubMedID: 21695235
Gene_locus related to this paper: zymti-f9wzw8 , zymti-f9x2y6 , zymti-f9x423 , zymti-f9x813 , zymti-f9xa54 , zymti-f9xb42 , zymti-f9xbu5 , zymti-f9xcr9 , zymti-f9xdr7 , zymti-f9xer1 , zymti-f9xez8 , zymti-f9xfz9 , zymti-f9xh29 , zymti-f9xhe7 , zymti-f9xhr4 , zymti-f9xk09 , zymti-f9xns5 , zymti-f9xiu1 , zymti-f9xng3 , zymti-f9x4f2 , zymti-f9x4s7 , zymti-f9xdm8 , zymti-f9wwy9 , zymti-f9xkf2 , zymti-f9xlt3 , zymti-f9x0i3 , zymti-f9wwa6 , zymti-f9wyk7 , zymti-f9x3z1 , zymti-f9xf16 , zymtr-a0a1x7rhi5 , zymti-f9xfj3 , zymti-pks1

Title : The plant cell wall-decomposing machinery underlies the functional diversity of forest fungi - Eastwood_2011_Science_333_762
Author(s) : Eastwood DC , Floudas D , Binder M , Majcherczyk A , Schneider P , Aerts A , Asiegbu FO , Baker SE , Barry K , Bendiksby M , Blumentritt M , Coutinho PM , Cullen D , de Vries RP , Gathman A , Goodell B , Henrissat B , Ihrmark K , Kauserud H , Kohler A , LaButti K , Lapidus A , Lavin JL , Lee YH , Lindquist E , Lilly W , Lucas S , Morin E , Murat C , Oguiza JA , Park J , Pisabarro AG , Riley R , Rosling A , Salamov A , Schmidt O , Schmutz J , Skrede I , Stenlid J , Wiebenga A , Xie X , Kues U , Hibbett DS , Hoffmeister D , Hogberg N , Martin F , Grigoriev IV , Watkinson SC
Ref : Science , 333 :762 , 2011
Abstract :
PubMedSearch : Eastwood_2011_Science_333_762
PubMedID: 21764756
Gene_locus related to this paper: serl3-f8prj2 , serl3-f8qcc4 , serl9-f8ngp6 , serl9-f8nhd7 , serl9-f8nhq9 , serl9-f8nq77 , serl9-f8nr67 , serl9-f8nrt5 , serl9-f8nvy7.1 , serl9-f8nvy7.2 , serl9-f8nvy8 , serl9-f8nxt0.1 , serl9-f8nxt0.2 , serl9-f8nzr3 , serl9-f8p0f0 , serl9-f8p6v0 , serl9-f8p015 , serl9-f8p018 , serl9-f8p386 , serl9-f8paz8 , serl9-f8pbv1 , serl9-f8pby1 , serl9-f8pc25 , serl9-f8pc39 , serl9-f8nia7 , serl3-f8pju2 , serl9-f8peh1 , serl9-nps3

Title : Comparative genomic analysis of the thermophilic biomass-degrading fungi Myceliophthora thermophila and Thielavia terrestris - Berka_2011_Nat.Biotechnol_29_922
Author(s) : Berka RM , Grigoriev IV , Otillar R , Salamov A , Grimwood J , Reid I , Ishmael N , John T , Darmond C , Moisan MC , Henrissat B , Coutinho PM , Lombard V , Natvig DO , Lindquist E , Schmutz J , Lucas S , Harris P , Powlowski J , Bellemare A , Taylor D , Butler G , de Vries RP , Allijn IE , van den Brink J , Ushinsky S , Storms R , Powell AJ , Paulsen IT , Elbourne LD , Baker SE , Magnuson J , Laboissiere S , Clutterbuck AJ , Martinez D , Wogulis M , de Leon AL , Rey MW , Tsang A
Ref : Nat Biotechnol , 29 :922 , 2011
Abstract :
PubMedSearch : Berka_2011_Nat.Biotechnol_29_922
PubMedID: 21964414
Gene_locus related to this paper: thiha-cip2 , thite-g2r8b5 , thite-g2rcm8 , thite-g2r192 , thiha-g2qdy2 , thiha-g2qh51 , thite-g2rae6 , thite-g2r5h0 , thiha-g2qj94 , thiha-g2qnb2 , thite-g2rg14 , myctt-g2q973 , thite-g2qtu3 , myctt-g2qpr0 , thite-g2rhm0 , 9pezi-a0a3s4b069 , myctt-g2qmb4 , thett-g2qur2

Title : Genome sequence of the model mushroom Schizophyllum commune - Ohm_2010_Nat.Biotechnol_28_957
Author(s) : Ohm RA , de Jong JF , Lugones LG , Aerts A , Kothe E , Stajich JE , de Vries RP , Record E , Levasseur A , Baker SE , Bartholomew KA , Coutinho PM , Erdmann S , Fowler TJ , Gathman AC , Lombard V , Henrissat B , Knabe N , Kues U , Lilly WW , Lindquist E , Lucas S , Magnuson JK , Piumi F , Raudaskoski M , Salamov A , Schmutz J , Schwarze FW , vanKuyk PA , Horton JS , Grigoriev IV , Wosten HA
Ref : Nat Biotechnol , 28 :957 , 2010
Abstract :
PubMedSearch : Ohm_2010_Nat.Biotechnol_28_957
PubMedID: 20622885
Gene_locus related to this paper: schcm-d8pqz6 , schcm-d8prj2 , schcm-d8pug6 , schcm-d8pxe8 , schcm-d8pxe9 , schcm-d8pxz1 , schcm-d8q1c7 , schcm-d8q2b4 , schcm-d8q3j1 , schcm-d8q5m5 , schcm-d8q7x7.1 , schcm-d8q7x7.2 , schcm-d8q8y8 , schcm-d8q9n6 , schcm-d8q697 , schcm-d8qip8 , schcm-d8q5s5 , schcm-d8ppb3 , schcm-d8ppb6 , schcm-d8pv73 , schcm-d8pzm1 , schcm-d8q5a7 , schcm-d8qif0

Title : Two glucuronoyl esterases of Phanerochaete chrysosporium - Duranova_2009_Arch.Microbiol_191_133
Author(s) : Duranova M , Spanikova S , Wosten HA , Biely P , de Vries RP
Ref : Arch Microbiol , 191 :133 , 2009
Abstract :
PubMedSearch : Duranova_2009_Arch.Microbiol_191_133
PubMedID: 18854978
Gene_locus related to this paper: wolco-gce1 , phacr-gce1

Title : The 2008 update of the Aspergillus nidulans genome annotation: a community effort - Wortman_2009_Fungal.Genet.Biol_46 Suppl 1_S2
Author(s) : Wortman JR , Gilsenan JM , Joardar V , Deegan J , Clutterbuck J , Andersen MR , Archer D , Bencina M , Braus G , Coutinho P , von Dohren H , Doonan J , Driessen AJ , Durek P , Espeso E , Fekete E , Flipphi M , Estrada CG , Geysens S , Goldman G , de Groot PW , Hansen K , Harris SD , Heinekamp T , Helmstaedt K , Henrissat B , Hofmann G , Homan T , Horio T , Horiuchi H , James S , Jones M , Karaffa L , Karanyi Z , Kato M , Keller N , Kelly DE , Kiel JA , Kim JM , van der Klei IJ , Klis FM , Kovalchuk A , Krasevec N , Kubicek CP , Liu B , Maccabe A , Meyer V , Mirabito P , Miskei M , Mos M , Mullins J , Nelson DR , Nielsen J , Oakley BR , Osmani SA , Pakula T , Paszewski A , Paulsen I , Pilsyk S , Pocsi I , Punt PJ , Ram AF , Ren Q , Robellet X , Robson G , Seiboth B , van Solingen P , Specht T , Sun J , Taheri-Talesh N , Takeshita N , Ussery D , vanKuyk PA , Visser H , van de Vondervoort PJ , de Vries RP , Walton J , Xiang X , Xiong Y , Zeng AP , Brandt BW , Cornell MJ , van den Hondel CA , Visser J , Oliver SG , Turner G
Ref : Fungal Genet Biol , 46 Suppl 1 :S2 , 2009
Abstract :
PubMedSearch : Wortman_2009_Fungal.Genet.Biol_46 Suppl 1_S2
PubMedID: 19146970
Gene_locus related to this paper: emeni-axe1 , emeni-c8v4m7 , emeni-faec , emeni-ppme1 , emeni-q5ara9 , emeni-q5arf0 , emeni-q5as30 , emeni-q5ase8 , emeni-q5av79 , emeni-q5aw09 , emeni-q5awc3 , emeni-q5awc7 , emeni-q5awu9 , emeni-q5aww4 , emeni-q5ax50 , emeni-q5ay37 , emeni-q5ay57 , emeni-q5ay59 , emeni-q5ayk9 , emeni-q5ays5 , emeni-q5az32 , emeni-q5az91 , emeni-q5az97 , emeni-q5azp1 , emeni-q5b0i6 , emeni-q5b1h2 , emeni-q5b2a9 , emeni-q5b2p7 , emeni-q5b3d2 , emeni-q5b4q7 , emeni-q5b5u7 , emeni-q5b5y4 , emeni-q5b9e7 , emeni-q5b9i0 , emeni-q5b364 , emeni-q5b446 , emeni-q5b938 , emeni-q5ba78 , emeni-q5bcd1 , emeni-q5bcd2 , emeni-q5bde7 , emeni-q5bdr0 , emeni-q5bf92 , emeni-q7si80 , emeni-q5bdv9 , emeni-c8vu15 , 9euro-a0a3d8t644 , emeni-q5b719 , emeni-q5ax97 , emeni-tdia , emeni-afoc , emeni-dbae

Title : Biotechnological applications and potential of fungal feruloyl esterases based on prevalence, classification and biochemical diversity - Benoit_2008_Biotechnol.Lett_30_387
Author(s) : Benoit I , Danchin EG , Bleichrodt RJ , de Vries RP
Ref : Biotechnol Lett , 30 :387 , 2008
Abstract :
PubMedSearch : Benoit_2008_Biotechnol.Lett_30_387
PubMedID: 17973091

Title : The genome sequence of the model ascomycete fungus Podospora anserina - Espagne_2008_Genome.Biol_9_R77
Author(s) : Espagne E , Lespinet O , Malagnac F , Da Silva C , Jaillon O , Porcel BM , Couloux A , Aury JM , Segurens B , Poulain J , Anthouard V , Grossetete S , Khalili H , Coppin E , Dequard-Chablat M , Picard M , Contamine V , Arnaise S , Bourdais A , Berteaux-Lecellier V , Gautheret D , de Vries RP , Battaglia E , Coutinho PM , Danchin EG , Henrissat B , Khoury RE , Sainsard-Chanet A , Boivin A , Pinan-Lucarre B , Sellem CH , Debuchy R , Wincker P , Weissenbach J , Silar P
Ref : Genome Biol , 9 :R77 , 2008
Abstract :
PubMedSearch : Espagne_2008_Genome.Biol_9_R77
PubMedID: 18460219
Gene_locus related to this paper: podan-b2a8u1 , podan-b2a9c4 , podan-b2a9k6 , podan-b2aa90 , podan-b2ab33 , podan-b2abs0 , podan-b2ac17 , podan-b2ack2 , podan-b2ad07 , podan-b2adj6 , podan-b2adk0 , podan-b2ae59 , podan-b2aee7 , podan-b2af51 , podan-b2afn5 , podan-b2afu6 , podan-b2akq7 , podan-b2aly0 , podan-b2am11 , podan-b2an24 , podan-b2ank1 , podan-b2apa8 , podan-b2api8 , podan-b2apj6 , podan-b2arl9 , podan-b2arz7 , podan-b2ase4 , podan-b2atn0 , podan-b2au46 , podan-b2aun9 , podan-b2av47 , podan-b2ava6 , podan-b2avm3 , podan-b2avu5 , podan-b2avx3 , podan-b2awk8 , podan-b2axk2 , podan-b2axz2 , podan-b2b1p7 , podan-b2b5e4 , podan-b2b6n7 , podan-b2b069 , podan-b2b073 , podan-b2b395 , podan-dapb , podan-b2afr0 , podan-b2a9k8 , podan-b2atb3 , podan-b2aca3 , podan-b2arv3 , podan-b2ank5 , podan-b2ax54 , podan-b2ad56 , podan-b2anm1 , podan-b2aya1 , podan-b2b164 , podan-a0a090d4h4 , podan-a0a090ccl8 , podan-b2b5p4 , podan-b2azp1 , podan-b2af75 , podan-b2alm5 , podan-b2ass5 , podan-b2aez8 , podan-kex1 , podan-cbpya

Title : Identification of genes encoding microbial glucuronoyl esterases - Li_2007_FEBS.Lett_581_4029
Author(s) : Li XL , Spanikova S , de Vries RP , Biely P
Ref : FEBS Letters , 581 :4029 , 2007
Abstract :
PubMedSearch : Li_2007_FEBS.Lett_581_4029
PubMedID: 17678650
Gene_locus related to this paper: hypjq-cip2

Title : Genome sequencing and analysis of the versatile cell factory Aspergillus niger CBS 513.88 - Pel_2007_Nat.Biotechnol_25_221
Author(s) : Pel HJ , de Winde JH , Archer DB , Dyer PS , Hofmann G , Schaap PJ , Turner G , de Vries RP , Albang R , Albermann K , Andersen MR , Bendtsen JD , Benen JA , van den Berg M , Breestraat S , Caddick MX , Contreras R , Cornell M , Coutinho PM , Danchin EG , Debets AJ , Dekker P , van Dijck PW , van Dijk A , Dijkhuizen L , Driessen AJ , d'Enfert C , Geysens S , Goosen C , Groot GS , de Groot PW , Guillemette T , Henrissat B , Herweijer M , van den Hombergh JP , van den Hondel CA , van der Heijden RT , van der Kaaij RM , Klis FM , Kools HJ , Kubicek CP , van Kuyk PA , Lauber J , Lu X , van der Maarel MJ , Meulenberg R , Menke H , Mortimer MA , Nielsen J , Oliver SG , Olsthoorn M , Pal K , van Peij NN , Ram AF , Rinas U , Roubos JA , Sagt CM , Schmoll M , Sun J , Ussery D , Varga J , Vervecken W , van de Vondervoort PJ , Wedler H , Wosten HA , Zeng AP , van Ooyen AJ , Visser J , Stam H
Ref : Nat Biotechnol , 25 :221 , 2007
Abstract :
PubMedSearch : Pel_2007_Nat.Biotechnol_25_221
PubMedID: 17259976
Gene_locus related to this paper: aspna-g3yal2 , aspnc-a2q8r7 , aspnc-a2q814 , aspnc-a2qb93 , aspnc-a2qbd3 , aspnc-a2qbh3 , aspnc-a2qbx7 , aspnc-a2qdj6 , aspnc-a2qe77 , aspnc-a2qf54 , aspnc-a2qfe9 , aspnc-a2qg33 , aspnc-a2qgj6 , aspnc-a2qgm6 , aspnc-a2qh52 , aspnc-a2qh76 , aspnc-a2qh85 , aspnc-a2qhe2 , aspnc-a2qi32 , aspnc-a2qib2 , aspnc-a2qk14 , aspnc-a2ql23 , aspnc-a2ql89 , aspnc-a2ql90 , aspnc-a2qla0 , aspnc-a2qlz0 , aspnc-a2qm14 , aspnc-a2qmk5 , aspnc-a2qms0 , aspnc-a2qn29 , aspnc-a2qn56 , aspnc-a2qn70 , aspnc-a2qnw9 , aspnc-a2qr21 , aspnc-a2qs22 , aspnc-a2qt50 , aspnc-a2qti9 , aspnc-a2qtz0 , aspnc-a2quc1 , aspnc-a2qw06 , aspnc-a2qwz6 , aspnc-a2qx92 , aspnc-a2qyf0 , aspnc-a2qys7 , aspnc-a2qz72 , aspnc-a2qzn6 , aspnc-a2qzr0 , aspnc-a2qzs1 , aspnc-a2qzx0 , aspnc-a2qzx4 , aspnc-a2r0p4 , aspnc-a2r0u0 , aspnc-a2r1p3 , aspnc-a2r1r5 , aspnc-a2r2i5 , aspnc-a2r2l0 , aspnc-a2r3s8 , aspnc-a2r4c0 , aspnc-a2r4j8 , aspnc-a2r5r4 , aspnc-a2r6g3 , aspnc-a2r6h5 , aspnc-a2r6h8 , aspnc-a2r7q1 , aspnc-a2r8r3 , aspnc-a2r8z3 , aspnc-a2r9y8 , aspnc-a2r032 , aspnc-a2r040 , aspnc-a2r273 , aspnc-a2r496 , aspnc-a2r502 , aspnc-a2ra07 , aspnc-a2rap4 , aspnc-a2raq2 , aspnc-a2rav1 , aspnc-a5aaf4 , aspnc-a5ab63 , aspnc-a5abc6 , aspnc-a5abe5 , aspnc-a5abe8 , aspnc-a5abf0 , aspnc-a5abh9 , aspnc-a5abk1 , aspnc-a5abt2 , aspnc-a5abz1 , aspnc-atg15 , aspnc-axe1 , aspnc-cuti1 , aspnc-cuti2 , aspnc-faec , aspng-a2q8w0 , aspng-a2qs46 , aspng-a2qst4 , aspng-a2qv27 , aspng-a2qzk9 , aspng-a2r0p8 , aspng-a2r225 , aspng-DAPB , aspng-DPP5 , aspng-faeb , aspni-APSC , aspni-EstA , aspni-FAEA , aspni-PAPA , aspkw-g7y0v7 , aspnc-a2qt47 , aspnc-a2qt66 , aspnc-a2r199 , aspnc-a2r871 , aspnc-a2qbp6 , aspnc-a2qqa1 , aspnc-a2qt70 , aspna-g3y5a6 , aspna-g3xpw9 , aspnc-a2qw57 , aspaw-a0a401kcz4 , aspna-alba , aspnc-kex1 , aspnc-cbpya , aspnc-a2qbg8

Title : Mannitol is required for stress tolerance in Aspergillus niger conidiospores - Ruijter_2003_Eukaryot.Cell_2_690
Author(s) : Ruijter GJ , Bax M , Patel H , Flitter SJ , van de Vondervoort PJ , de Vries RP , vanKuyk PA , Visser J
Ref : Eukaryot Cell , 2 :690 , 2003
Abstract :
PubMedSearch : Ruijter_2003_Eukaryot.Cell_2_690
PubMedID: 12912888

Title : Isolation and characterization of two specific regulatory Aspergillus niger mutants shows antagonistic regulation of arabinan and xylan metabolism - de Groot_2003_Microbiology_149_1183
Author(s) : de Groot MJ , van de Vondervoort PJ , de Vries RP , vanKuyk PA , Ruijter GJ , Visser J
Ref : Microbiology , 149 :1183 , 2003
Abstract :
PubMedSearch : de Groot_2003_Microbiology_149_1183
PubMedID: 12724380

Title : Regulation of Aspergillus genes encoding plant cell wall polysaccharide-degrading enzymes\; relevance for industrial production - de Vries_2003_Appl.Microbiol.Biotechnol_61_10
Author(s) : de Vries RP
Ref : Applied Microbiology & Biotechnology , 61 :10 , 2003
Abstract :
PubMedSearch : de Vries_2003_Appl.Microbiol.Biotechnol_61_10
PubMedID: 12658510

Title : Glycerol dehydrogenase, encoded by gldB is essential for osmotolerance in Aspergillus nidulans - de Vries_2003_Mol.Microbiol_49_131
Author(s) : de Vries RP , Flitter SJ , van de Vondervoort PJ , Chaveroche MK , Fontaine T , Fillinger S , Ruijter GJ , d'Enfert C , Visser J
Ref : Molecular Microbiology , 49 :131 , 2003
Abstract :
PubMedSearch : de Vries_2003_Mol.Microbiol_49_131
PubMedID: 12823816

Title : The Aspergillus niger faeB gene encodes a second feruloyl esterase involved in pectin and xylan degradation and is specifically induced in the presence of aromatic compounds - de Vries_2002_Biochem.J_363_377
Author(s) : de Vries RP , vanKuyk PA , Kester HC , Visser J
Ref : Biochemical Journal , 363 :377 , 2002
Abstract :
PubMedSearch : de Vries_2002_Biochem.J_363_377
PubMedID: 11931668
Gene_locus related to this paper: aspng-faeb

Title : Expression profiling of pectinolytic genes from Aspergillus niger - de Vries_2002_FEBS.Lett_530_41
Author(s) : de Vries RP , Jansen J , Aguilar G , Parenicova L , Joosten V , Wulfert F , Benen JA , Visser J
Ref : FEBS Letters , 530 :41 , 2002
Abstract :
PubMedSearch : de Vries_2002_FEBS.Lett_530_41
PubMedID: 12387863

Title : The beta-1,4-endogalactanase A gene from Aspergillus niger is specifically induced on arabinose and galacturonic acid and plays an important role in the degradation of pectic hairy regions - De Vries_2002_Eur.J.Biochem_269_4985
Author(s) : de Vries RP , Parenicova L , Hinz SW , Kester HC , Beldman G , Benen JA , Visser J
Ref : European Journal of Biochemistry , 269 :4985 , 2002
Abstract :
PubMedSearch : De Vries_2002_Eur.J.Biochem_269_4985
PubMedID: 12383257

Title : Regulation of the alpha-glucuronidase-encoding gene ( aguA) from Aspergillus niger - de Vries_2002_Mol.Genet.Genomics_268_96
Author(s) : de Vries RP , van de Vondervoort PJ , Hendriks L , van de Belt M , Visser J
Ref : Mol Genet Genomics , 268 :96 , 2002
Abstract :
PubMedSearch : de Vries_2002_Mol.Genet.Genomics_268_96
PubMedID: 12242504

Title : The Aspergillus niger D-xylulose kinase gene is co-expressed with genes encoding arabinan degrading enzymes, and is essential for growth on D-xylose and L-arabinose - vanKuyk_2001_Eur.J.Biochem_268_5414
Author(s) : vanKuyk PA , de Groot MJ , Ruijter GJ , de Vries RP , Visser J
Ref : European Journal of Biochemistry , 268 :5414 , 2001
Abstract :
PubMedSearch : vanKuyk_2001_Eur.J.Biochem_268_5414
PubMedID: 11606204

Title : Cloning and characterization of Aspergillus niger genes encoding an alpha-galactosidase and a beta-mannosidase involved in galactomannan degradation - Ademark_2001_Eur.J.Biochem_268_2982
Author(s) : Ademark P , de Vries RP , Hagglund P , Stalbrand H , Visser J
Ref : European Journal of Biochemistry , 268 :2982 , 2001
Abstract :
PubMedSearch : Ademark_2001_Eur.J.Biochem_268_2982
PubMedID: 11358516

Title : Aspergillus enzymes involved in degradation of plant cell wall polysaccharides - de Vries_2001_Microbiol.Mol.Biol.Rev_65_497
Author(s) : de Vries RP , Visser J
Ref : Microbiol Mol Biol Rev , 65 :497 , 2001
Abstract :
PubMedSearch : de Vries_2001_Microbiol.Mol.Biol.Rev_65_497
PubMedID: 11729262

Title : Synergy between enzymes from Aspergillus involved in the degradation of plant cell wall polysaccharides - de Vries_2000_Carbohydr.Res_327_401
Author(s) : de Vries RP , Kester HC , Poulsen CH , Benen JA , Visser J
Ref : Carbohydr Res , 327 :401 , 2000
Abstract :
PubMedSearch : de Vries_2000_Carbohydr.Res_327_401
PubMedID: 10990025

Title : Inverting character of alpha-glucuronidase A from Aspergillus tubingensis - Biely_2000_Biochim.Biophys.Acta_1474_360
Author(s) : Biely P , de Vries RP , Vrsanska M , Visser J
Ref : Biochimica & Biophysica Acta , 1474 :360 , 2000
Abstract :
PubMedSearch : Biely_2000_Biochim.Biophys.Acta_1474_360
PubMedID: 10779688

Title : Differential expression of three alpha-galactosidase genes and a single beta-galactosidase gene from Aspergillus niger - de Vries_1999_Appl.Environ.Microbiol_65_2453
Author(s) : de Vries RP , van den Broeck HC , Dekkers E , Manzanares P , De Graaff LH , Visser J
Ref : Applied Environmental Microbiology , 65 :2453 , 1999
Abstract :
PubMedSearch : de Vries_1999_Appl.Environ.Microbiol_65_2453
PubMedID: 10347026

Title : Regulation of the feruloyl esterase (faeA) gene from Aspergillus niger - de Vries_1999_Appl.Environ.Microbiol_65_5500
Author(s) : de Vries RP , Visser J
Ref : Applied Environmental Microbiology , 65 :5500 , 1999
Abstract :
PubMedSearch : de Vries_1999_Appl.Environ.Microbiol_65_5500
PubMedID: 10584009

Title : CreA modulates the XlnR-induced expression on xylose of Aspergillus niger genes involved in xylan degradation - de Vries_1999_Res.Microbiol_150_281
Author(s) : de Vries RP , Visser J , De Graaff LH
Ref : Res Microbiol , 150 :281 , 1999
Abstract :
PubMedSearch : de Vries_1999_Res.Microbiol_150_281
PubMedID: 10376490

Title : The transcriptional activator XlnR regulates both xylanolytic and endoglucanase gene expression in Aspergillus niger - van Peij_1998_Appl.Environ.Microbiol_64_3615
Author(s) : van Peij NN , Gielkens MM , de Vries RP , Visser J , De Graaff LH
Ref : Applied Environmental Microbiology , 64 :3615 , 1998
Abstract :
PubMedSearch : van Peij_1998_Appl.Environ.Microbiol_64_3615
PubMedID: 9758775

Title : Stability of feruloyl esterases from Aspergillus -
Author(s) : Faulds CB , de Vries RP , Visser J , Williamson G
Ref : Biochemical Society Transactions , 26 :S165 , 1998
PubMedID: 9649840

Title : aguA, the gene encoding an extracellular alpha-glucuronidase from Aspergillus tubingensis, is specifically induced on xylose and not on glucuronic acid - de Vries_1998_J.Bacteriol_180_243
Author(s) : de Vries RP , Poulsen CH , Madrid S , Visser J
Ref : Journal of Bacteriology , 180 :243 , 1998
Abstract :
PubMedSearch : de Vries_1998_J.Bacteriol_180_243
PubMedID: 9440512

Title : Influence of ferulic acid on the production of feruloyl esterases by Aspergillus niger - Faulds_1997_FEMS.Microbiol.Lett_157_239
Author(s) : Faulds CB , de Vries RP , Kroon PA , Visser J , Williamson G
Ref : FEMS Microbiology Letters , 157 :239 , 1997
Abstract :
PubMedSearch : Faulds_1997_FEMS.Microbiol.Lett_157_239
PubMedID: 9435103

Title : The faeA genes from Aspergillus niger and Aspergillus tubingensis encode ferulic acid esterases involved in degradation of complex cell wall polysaccharides - de Vries_1997_Appl.Environ.Microbiol_63_4638
Author(s) : de Vries RP , Michelsen B , Poulsen CH , Kroon PA , van den Heuvel RH , Faulds CB , Williamson G , van den Hombergh JP , Visser J
Ref : Applied Environmental Microbiology , 63 :4638 , 1997
Abstract :
PubMedSearch : de Vries_1997_Appl.Environ.Microbiol_63_4638
PubMedID: 9406381
Gene_locus related to this paper: aspni-FAEA , asptu-FAEA

Title : Characterization of an Aspergillus nidulans L-arabitol dehydrogenase mutant - de Vries_1994_FEMS.Microbiol.Lett_123_83
Author(s) : de Vries RP , Flipphi MJ , Witteveen CF , Visser J
Ref : FEMS Microbiology Letters , 123 :83 , 1994
Abstract :
PubMedSearch : de Vries_1994_FEMS.Microbiol.Lett_123_83
PubMedID: 7988903

Title : In vitro immune responsiveness to vaccinea virus and HLA - de Vries_1977_N.Engl.J.Med_297_692
Author(s) : de Vries RP , Kreeftenberg HG , Loggen HG , van Rood JJ
Ref : N Engl J Med , 297 :692 , 1977
Abstract :
PubMedSearch : de Vries_1977_N.Engl.J.Med_297_692
PubMedID: 70749