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| Title : High-level relatedness among Mycobacterium abscessus subsp. massiliense strains from widely separated outbreaks - Tettelin_2014_Emerg.Infect.Dis_20_364 |
| Author(s) : Tettelin H , Davidson RM , Agrawal S , Aitken ML , Shallom S , Hasan NA , Strong M , de Moura VC , De Groote MA , Duarte RS , Hine E , Parankush S , Su Q , Daugherty SC , Fraser CM , Brown-Elliott BA , Wallace RJ, Jr. , Holland SM , Sampaio EP , Olivier KN , Jackson M , Zelazny AM |
| Ref : Emerg Infect Dis , 20 :364 , 2014 |
| Abstract : Tettelin_2014_Emerg.Infect.Dis_20_364 |
| ESTHER : Tettelin_2014_Emerg.Infect.Dis_20_364 |
| PubMedSearch : Tettelin_2014_Emerg.Infect.Dis_20_364 |
| PubMedID: 24565502 |
| Gene_locus related to this paper: mycab-b1mch4 , mycab-b1mdu3 , mycab-b1mes2 , mycab-b1mes3 , mycab-b1mfj3 , mycab-b1mgd3 , mycab-b1mkl9 , mycab-r4v1a9 |
| Title : Genomic insights into the emerging human pathogen Mycobacterium massiliense - Tettelin_2012_J.Bacteriol_194_5450 |
| Author(s) : Tettelin H , Sampaio EP , Daugherty SC , Hine E , Riley DR , Sadzewicz L , Sengamalay N , Shefchek K , Su Q , Tallon LJ , Conville P , Olivier KN , Holland SM , Fraser CM , Zelazny AM |
| Ref : Journal of Bacteriology , 194 :5450 , 2012 |
| Abstract : Tettelin_2012_J.Bacteriol_194_5450 |
| ESTHER : Tettelin_2012_J.Bacteriol_194_5450 |
| PubMedSearch : Tettelin_2012_J.Bacteriol_194_5450 |
| PubMedID: 22965080 |
| Gene_locus related to this paper: mycab-b1mdu3 , mycab-b1mes2 , mycab-b1mes3 , mycab-b1mfj3 , mycab-i9cu79 , mycab-i0pm15 , mycab-i0p5k2 , mycab-h0ig31 , mycab-h0iii8 , myca9-b1miq0 , mycab-r4v1a9 |
| Title : Draft genome sequences of the diarrheagenic Escherichia coli collection - Hazen_2012_J.Bacteriol_194_3026 |
| Author(s) : Hazen TH , Sahl JW , Redman JC , Morris CR , Daugherty SC , Chibucos MC , Sengamalay NA , Fraser-Liggett CM , Steinsland H , Whittam TS , Whittam B , Manning SD , Rasko DA |
| Ref : Journal of Bacteriology , 194 :3026 , 2012 |
| Abstract : Hazen_2012_J.Bacteriol_194_3026 |
| ESTHER : Hazen_2012_J.Bacteriol_194_3026 |
| PubMedSearch : Hazen_2012_J.Bacteriol_194_3026 |
| PubMedID: 22582382 |
| Gene_locus related to this paper: ecoli-d7xp23 , ecoli-fes , ecoli-MCMK , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-YFBB , ecoli-yhet , ecoli-yiel , ecoli-ypt1 , ecoli-yqia , ecoli-Z1341 , ecoli-Z1930 , ecoli-YfhR |
| Title : Whole genome sequencing to investigate the emergence of clonal complex 23 Neisseria meningitidis serogroup Y disease in the United States - Krauland_2012_PLoS.One_7_e35699 |
| Author(s) : Krauland MG , Dunning Hotopp JC , Riley DR , Daugherty SC , Marsh JW , Messonnier NE , Mayer LW , Tettelin H , Harrison LH |
| Ref : PLoS ONE , 7 :e35699 , 2012 |
| Abstract : Krauland_2012_PLoS.One_7_e35699 |
| ESTHER : Krauland_2012_PLoS.One_7_e35699 |
| PubMedSearch : Krauland_2012_PLoS.One_7_e35699 |
| PubMedID: 22558202 |
| Title : Neisseria meningitidis is structured in clades associated with restriction modification systems that modulate homologous recombination - Budroni_2011_Proc.Natl.Acad.Sci.U.S.A_108_4494 |
| Author(s) : Budroni S , Siena E , Dunning Hotopp JC , Seib KL , Serruto D , Nofroni C , Comanducci M , Riley DR , Daugherty SC , Angiuoli SV , Covacci A , Pizza M , Rappuoli R , Moxon ER , Tettelin H , Medini D |
| Ref : Proc Natl Acad Sci U S A , 108 :4494 , 2011 |
| Abstract : Budroni_2011_Proc.Natl.Acad.Sci.U.S.A_108_4494 |
| ESTHER : Budroni_2011_Proc.Natl.Acad.Sci.U.S.A_108_4494 |
| PubMedSearch : Budroni_2011_Proc.Natl.Acad.Sci.U.S.A_108_4494 |
| PubMedID: 21368196 |
| Gene_locus related to this paper: neigo-pip , neima-metx , neime-ESD , neime-NMA2216 , neime-NMB0276 , neime-NMB1877 |
| Title : An Enterotoxin-Bearing Pathogenicity Island in Staphylococcus epidermidis - Madhusoodanan_2011_J.Bacteriol_193_1854 |
| Author(s) : Madhusoodanan J , Seo KS , Remortel B , Park JY , Hwang SY , Fox LK , Park YH , Deobald CF , Wang D , Liu S , Daugherty SC , Gill AL , Bohach GA , Gill SR |
| Ref : Journal of Bacteriology , 193 :1854 , 2011 |
| Abstract : Madhusoodanan_2011_J.Bacteriol_193_1854 |
| ESTHER : Madhusoodanan_2011_J.Bacteriol_193_1854 |
| PubMedSearch : Madhusoodanan_2011_J.Bacteriol_193_1854 |
| PubMedID: 21317317 |
| Gene_locus related to this paper: staep-SE0386 , staep-SE0389 , staep-SE0424 , staep-SE0564 , staep-SE0980 , staep-SE1436 , staep-SE1460 , staep-SE1510 , staep-SE1929 , staep-SERP2035 , staep-SE2328 |
| Title : Metabolic complementarity and genomics of the dual bacterial symbiosis of sharpshooters - Wu_2006_PLoS.Biol_4_e188 |
| Author(s) : Wu D , Daugherty SC , Van Aken SE , Pai GH , Watkins KL , Khouri H , Tallon LJ , Zaborsky JM , Dunbar HE , Tran PL , Moran NA , Eisen JA |
| Ref : PLoS Biol , 4 :e188 , 2006 |
| Abstract : Wu_2006_PLoS.Biol_4_e188 |
| ESTHER : Wu_2006_PLoS.Biol_4_e188 |
| PubMedSearch : Wu_2006_PLoS.Biol_4_e188 |
| PubMedID: 16729848 |
| Gene_locus related to this paper: bauch-q1lsz2 |
| Title : Skewed genomic variability in strains of the toxigenic bacterial pathogen, Clostridium perfringens - Myers_2006_Genome.Res_16_1031 |
| Author(s) : Myers GS , Rasko DA , Cheung JK , Ravel J , Seshadri R , DeBoy RT , Ren Q , Varga J , Awad MM , Brinkac LM , Daugherty SC , Haft DH , Dodson RJ , Madupu R , Nelson WC , Rosovitz MJ , Sullivan SA , Khouri H , Dimitrov GI , Watkins KL , Mulligan S , Benton J , Radune D , Fisher DJ , Atkins HS , Hiscox T , Jost BH , Billington SJ , Songer JG , McClane BA , Titball RW , Rood JI , Melville SB , Paulsen IT |
| Ref : Genome Res , 16 :1031 , 2006 |
| Abstract : Myers_2006_Genome.Res_16_1031 |
| ESTHER : Myers_2006_Genome.Res_16_1031 |
| PubMedSearch : Myers_2006_Genome.Res_16_1031 |
| PubMedID: 16825665 |
| Gene_locus related to this paper: clope-CPE0307 , clope-CPE0432 , clope-CPE1581 , clope-CPE1596 , clope-CPE1989 , clope-CPE2231 , clope-lipa , clope-LIPB , clope-PLDB |
| Title : Comparative genomics of emerging human ehrlichiosis agents - Dunning Hotopp_2006_PLoS.Genet_2_e21 |
| Author(s) : Dunning Hotopp JC , Lin M , Madupu R , Crabtree J , Angiuoli SV , Eisen JA , Seshadri R , Ren Q , Wu M , Utterback TR , Smith S , Lewis M , Khouri H , Zhang C , Niu H , Lin Q , Ohashi N , Zhi N , Nelson W , Brinkac LM , Dodson RJ , Rosovitz MJ , Sundaram J , Daugherty SC , Davidsen T , Durkin AS , Gwinn M , Haft DH , Selengut JD , Sullivan SA , Zafar N , Zhou L , Benahmed F , Forberger H , Halpin R , Mulligan S , Robinson J , White O , Rikihisa Y , Tettelin H |
| Ref : PLoS Genet , 2 :e21 , 2006 |
| Abstract : Dunning Hotopp_2006_PLoS.Genet_2_e21 |
| ESTHER : Dunning Hotopp_2006_PLoS.Genet_2_e21 |
| PubMedSearch : Dunning Hotopp_2006_PLoS.Genet_2_e21 |
| PubMedID: 16482227 |
| Gene_locus related to this paper: anapz-q2gj80 , anapz-q2gle9 , anapz-q2glf0 , anapz-q2gln7 , ehrch-q40iu0 , ehrch-q40jj7 , ehrcr-q2gfq9 , neosm-q2gcq8 , neosm-q2gdf2 , neosm-q2gcn8 , anapz-q2gk48 , ehrcr-q2ggj6 |
| Title : Genome sequence of Synechococcus CC9311: Insights into adaptation to a coastal environment - Palenik_2006_Proc.Natl.Acad.Sci.U.S.A_103_13555 |
| Author(s) : Palenik B , Ren Q , Dupont CL , Myers GS , Heidelberg JF , Badger JH , Madupu R , Nelson WC , Brinkac LM , Dodson RJ , Durkin AS , Daugherty SC , Sullivan SA , Khouri H , Mohamoud Y , Halpin R , Paulsen IT |
| Ref : Proc Natl Acad Sci U S A , 103 :13555 , 2006 |
| Abstract : Palenik_2006_Proc.Natl.Acad.Sci.U.S.A_103_13555 |
| ESTHER : Palenik_2006_Proc.Natl.Acad.Sci.U.S.A_103_13555 |
| PubMedSearch : Palenik_2006_Proc.Natl.Acad.Sci.U.S.A_103_13555 |
| PubMedID: 16938853 |
| Gene_locus related to this paper: syns3-q0i8r7 , syns3-q0i9w2 , syns3-q0i996 , syns3-q0ia13 , syns3-q0ia55 , syns3-q0ib73 , syns3-q0ibm2 , syns3-q0ibp1 , syns3-q0iby1 , syns9-q3ax89 , syns3-q0ibv4 |
| Title : Genome sequence of the PCE-dechlorinating bacterium Dehalococcoides ethenogenes - Seshadri_2005_Science_307_105 |
| Author(s) : Seshadri R , Adrian L , Fouts DE , Eisen JA , Phillippy AM , Methe BA , Ward NL , Nelson WC , DeBoy RT , Khouri HM , Kolonay JF , Dodson RJ , Daugherty SC , Brinkac LM , Sullivan SA , Madupu R , Nelson KE , Kang KH , Impraim M , Tran K , Robinson JM , Forberger HA , Fraser CM , Zinder SH , Heidelberg JF |
| Ref : Science , 307 :105 , 2005 |
| Abstract : Seshadri_2005_Science_307_105 |
| ESTHER : Seshadri_2005_Science_307_105 |
| PubMedSearch : Seshadri_2005_Science_307_105 |
| PubMedID: 15637277 |
| Gene_locus related to this paper: dehm1-q3z6q3 , dehm1-q3z6x9 , dehm1-q3z6z2 , dehm1-q3z8f3 , dehm1-q3za50 |
| Title : Major structural differences and novel potential virulence mechanisms from the genomes of multiple campylobacter species - Fouts_2005_PLoS.Biol_3_e15 |
| Author(s) : Fouts DE , Mongodin EF , Mandrell RE , Miller WG , Rasko DA , Ravel J , Brinkac LM , DeBoy RT , Parker CT , Daugherty SC , Dodson RJ , Durkin AS , Madupu R , Sullivan SA , Shetty JU , Ayodeji MA , Shvartsbeyn A , Schatz MC , Badger JH , Fraser CM , Nelson KE |
| Ref : PLoS Biol , 3 :e15 , 2005 |
| Abstract : Fouts_2005_PLoS.Biol_3_e15 |
| ESTHER : Fouts_2005_PLoS.Biol_3_e15 |
| PubMedSearch : Fouts_2005_PLoS.Biol_3_e15 |
| PubMedID: 15660156 |
| Gene_locus related to this paper: camje-CJ0796C , camjr-q5ht69 , camjr-q5ht95 , camjr-q5huc7 , camjr-q5hwg6 , camju-a3yll6 |
| Title : Life in hot carbon monoxide: the complete genome sequence of Carboxydothermus hydrogenoformans Z-2901 - Wu_2005_PLoS.Genet_1_e65 |
| Author(s) : Wu M , Ren Q , Durkin AS , Daugherty SC , Brinkac LM , Dodson RJ , Madupu R , Sullivan SA , Kolonay JF , Haft DH , Nelson WC , Tallon LJ , Jones KM , Ulrich LE , Gonzalez JM , Zhulin IB , Robb FT , Eisen JA |
| Ref : PLoS Genet , 1 :e65 , 2005 |
| Abstract : Wu_2005_PLoS.Genet_1_e65 |
| ESTHER : Wu_2005_PLoS.Genet_1_e65 |
| PubMedSearch : Wu_2005_PLoS.Genet_1_e65 |
| PubMedID: 16311624 |
| Gene_locus related to this paper: carhz-metx , carhz-q3abd5 , carhz-q3adp4 |
| Title : Phylogenomics of the reproductive parasite Wolbachia pipientis wMel: a streamlined genome overrun by mobile genetic elements - Wu_2004_PLoS.Biol_2_E69 |
| Author(s) : Wu M , Sun LV , Vamathevan J , Riegler M , Deboy R , Brownlie JC , McGraw EA , Martin W , Esser C , Ahmadinejad N , Wiegand C , Madupu R , Beanan MJ , Brinkac LM , Daugherty SC , Durkin AS , Kolonay JF , Nelson WC , Mohamoud Y , Lee P , Berry K , Young MB , Utterback T , Weidman J , Nierman WC , Paulsen IT , Nelson KE , Tettelin H , O'Neill SL , Eisen JA |
| Ref : PLoS Biol , 2 :E69 , 2004 |
| Abstract : Wu_2004_PLoS.Biol_2_E69 |
| ESTHER : Wu_2004_PLoS.Biol_2_E69 |
| PubMedSearch : Wu_2004_PLoS.Biol_2_E69 |
| PubMedID: 15024419 |
| Gene_locus related to this paper: wolpm-q73gf0 , wolpm-q73gx7 |
| Title : The genome sequence of the anaerobic, sulfate-reducing bacterium Desulfovibrio vulgaris Hildenborough - Heidelberg_2004_Nat.Biotechnol_22_554 |
| Author(s) : Heidelberg JF , Seshadri R , Haveman SA , Hemme CL , Paulsen IT , Kolonay JF , Eisen JA , Ward N , Methe B , Brinkac LM , Daugherty SC , DeBoy RT , Dodson RJ , Durkin AS , Madupu R , Nelson WC , Sullivan SA , Fouts D , Haft DH , Selengut J , Peterson JD , Davidsen TM , Zafar N , Zhou L , Radune D , Dimitrov G , Hance M , Tran K , Khouri H , Gill J , Utterback TR , Feldblyum TV , Wall JD , Voordouw G , Fraser CM |
| Ref : Nat Biotechnol , 22 :554 , 2004 |
| Abstract : Heidelberg_2004_Nat.Biotechnol_22_554 |
| ESTHER : Heidelberg_2004_Nat.Biotechnol_22_554 |
| PubMedSearch : Heidelberg_2004_Nat.Biotechnol_22_554 |
| PubMedID: 15077118 |
| Gene_locus related to this paper: desvh-q72b36 , desvh-q72ed6 , desvh-q728i3 , desvh-q729w4 , desvh-q72b15 |
| Title : Genome of Geobacter sulfurreducens: metal reduction in subsurface environments - Methe_2003_Science_302_1967 |
| Author(s) : Methe BA , Nelson KE , Eisen JA , Paulsen IT , Nelson W , Heidelberg JF , Wu D , Wu M , Ward N , Beanan MJ , Dodson RJ , Madupu R , Brinkac LM , Daugherty SC , DeBoy RT , Durkin AS , Gwinn M , Kolonay JF , Sullivan SA , Haft DH , Selengut J , Davidsen TM , Zafar N , White O , Tran B , Romero C , Forberger HA , Weidman J , Khouri H , Feldblyum TV , Utterback TR , Van Aken SE , Lovley DR , Fraser CM |
| Ref : Science , 302 :1967 , 2003 |
| Abstract : Methe_2003_Science_302_1967 |
| ESTHER : Methe_2003_Science_302_1967 |
| PubMedSearch : Methe_2003_Science_302_1967 |
| PubMedID: 14671304 |
| Gene_locus related to this paper: geosl-q74a54 , geosl-q74ac8 , geosl-q74eb1 , geosl-q747u4 , geosl-q747v8 , geosl-q749w4 |
| Title : Complete genome sequence of the oral pathogenic Bacterium porphyromonas gingivalis strain W83 - Nelson_2003_J.Bacteriol_185_5591 |
| Author(s) : Nelson KE , Fleischmann RD , DeBoy RT , Paulsen IT , Fouts DE , Eisen JA , Daugherty SC , Dodson RJ , Durkin AS , Gwinn M , Haft DH , Kolonay JF , Nelson WC , Mason T , Tallon L , Gray J , Granger D , Tettelin H , Dong H , Galvin JL , Duncan MJ , Dewhirst FE , Fraser CM |
| Ref : Journal of Bacteriology , 185 :5591 , 2003 |
| Abstract : Nelson_2003_J.Bacteriol_185_5591 |
| ESTHER : Nelson_2003_J.Bacteriol_185_5591 |
| PubMedSearch : Nelson_2003_J.Bacteriol_185_5591 |
| PubMedID: 12949112 |
| Gene_locus related to this paper: 9gamm-q4a538 , porgi-DPP , porgi-q7mtk3 , porgi-q7mu18 , porgi-q7mub3 , porgi-q7muw6 , porgi-q7mvp4 , porgi-q7mwa7 , porgi-q7mx03 |
| Title : Complete genome sequence of the Q-fever pathogen Coxiella burnetii - Seshadri_2003_Proc.Natl.Acad.Sci.U.S.A_100_5455 |
| Author(s) : Seshadri R , Paulsen IT , Eisen JA , Read TD , Nelson KE , Nelson WC , Ward NL , Tettelin H , Davidsen TM , Beanan MJ , DeBoy RT , Daugherty SC , Brinkac LM , Madupu R , Dodson RJ , Khouri HM , Lee KH , Carty HA , Scanlan D , Heinzen RA , Thompson HA , Samuel JE , Fraser CM , Heidelberg JF |
| Ref : Proc Natl Acad Sci U S A , 100 :5455 , 2003 |
| Abstract : Seshadri_2003_Proc.Natl.Acad.Sci.U.S.A_100_5455 |
| ESTHER : Seshadri_2003_Proc.Natl.Acad.Sci.U.S.A_100_5455 |
| PubMedSearch : Seshadri_2003_Proc.Natl.Acad.Sci.U.S.A_100_5455 |
| PubMedID: 12704232 |
| Gene_locus related to this paper: coxbu-BIOH , coxbu-CBU0752 , coxbu-CBU1119 , coxbu-CBU1225 , coxbu-CBU1529 , coxbu-CBU1769 , coxbu-CBU1975 |